RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 ABHD8Q96I13 439 aa22.84■■□□□ 1.25
SNX17-206ENST00000484886 CCDC17Q96LX7 622 aa22.84■■□□□ 1.25
SNX17-206ENST00000484886 TRIM17Q9Y577 477 aa22.84■■□□□ 1.25
SNX17-206ENST00000484886 OSBPP22059 807 aa22.83■■□□□ 1.25
SNX17-206ENST00000484886 TTC22Q5TAA0 569 aa22.83■■□□□ 1.25
SNX17-206ENST00000484886 HIP1O00291 1037 aa22.82■■□□□ 1.24
SNX17-206ENST00000484886 SLC3A2P08195 630 aaKnown RBP22.82■■□□□ 1.24
SNX17-206ENST00000484886 GUCY1A2P33402 732 aa22.82■■□□□ 1.24
SNX17-206ENST00000484886 USP14P54578 494 aa22.82■■□□□ 1.24
SNX17-206ENST00000484886 IRX3P78415 501 aaPredicted RBP22.82■■□□□ 1.24
SNX17-206ENST00000484886 ARHGEF6Q15052 776 aa22.82■■□□□ 1.24
SNX17-206ENST00000484886 C17orf99Q6UX52 265 aa22.82■■□□□ 1.24
SNX17-206ENST00000484886 CENPQQ7L2Z9 268 aaPredicted RBP22.82■■□□□ 1.24
SNX17-206ENST00000484886 ACER1Q8TDN7 264 aa22.82■■□□□ 1.24
SNX17-206ENST00000484886 EFCC1Q9HA90 598 aa22.82■■□□□ 1.24
SNX17-206ENST00000484886 ZNF287Q9HBT7 754 aa22.82■■□□□ 1.24
SNX17-206ENST00000484886 ADGRA2Q96PE1 1338 aa22.82■■□□□ 1.24
SNX17-206ENST00000484886 ROBO3Q96MS0 1386 aa22.81■■□□□ 1.24
SNX17-206ENST00000484886 MFAP1P55081 439 aaKnown RBP22.81■■□□□ 1.24
SNX17-206ENST00000484886 ICA1Q05084 483 aa22.81■■□□□ 1.24
SNX17-206ENST00000484886 PKN2Q16513 984 aaKnown RBP22.81■■□□□ 1.24
SNX17-206ENST00000484886 IFFO2Q5TF58 517 aa22.81■■□□□ 1.24
SNX17-206ENST00000484886 VPS53Q5VIR6 699 aa22.81■■□□□ 1.24
SNX17-206ENST00000484886 CWC27Q6UX04 472 aaKnown RBP22.81■■□□□ 1.24
SNX17-206ENST00000484886 OTOP1Q7RTM1 612 aa22.81■■□□□ 1.24
SNX17-206ENST00000484886 EMILIN3Q9NT22 766 aa22.81■■□□□ 1.24
SNX17-206ENST00000484886 CCDC171Q6TFL3 1326 aa22.81■■□□□ 1.24
SNX17-206ENST00000484886 LACTBP83111 547 aaPredicted RBP22.8■■□□□ 1.24
SNX17-206ENST00000484886 ATP2B2Q01814 1243 aa22.8■■□□□ 1.24
SNX17-206ENST00000484886 PPARAQ07869 468 aa22.8■■□□□ 1.24
SNX17-206ENST00000484886 ZNF589Q86UQ0 364 aaPredicted RBP22.8■■□□□ 1.24
SNX17-206ENST00000484886 CLEC10AQ8IUN9 316 aa22.8■■□□□ 1.24
SNX17-206ENST00000484886 KIAA1683Q9H0B3 1180 aa22.8■■□□□ 1.24
SNX17-206ENST00000484886 ASCC2Q9H1I8 757 aaPredicted RBP22.8■■□□□ 1.24
SNX17-206ENST00000484886 ARHGEF10LQ9HCE6 1279 aa22.8■■□□□ 1.24
SNX17-206ENST00000484886 PRDM1O75626 825 aa22.79■■□□□ 1.24
SNX17-206ENST00000484886 GSPT1P15170 499 aaKnown RBP22.79■■□□□ 1.24
SNX17-206ENST00000484886 PDE4BQ07343 736 aa22.79■■□□□ 1.24
SNX17-206ENST00000484886 ZNF444Q8N0Y2 327 aaPredicted RBP22.79■■□□□ 1.24
SNX17-206ENST00000484886 CCDC136Q96JN2 1154 aa22.79■■□□□ 1.24
SNX17-206ENST00000484886 RASA1P20936 1047 aa22.78■■□□□ 1.24
SNX17-206ENST00000484886 ARHGAP39Q9C0H5 1083 aa22.78■■□□□ 1.24
SNX17-206ENST00000484886 SH2D4AQ9H788 454 aa22.78■■□□□ 1.24
SNX17-206ENST00000484886 CCDC85CA6NKD9 419 aa22.77■■□□□ 1.24
SNX17-206ENST00000484886 FOXP2O15409 715 aa22.77■■□□□ 1.24
SNX17-206ENST00000484886 FMNL1O95466 1100 aaPredicted RBP22.77■■□□□ 1.24
SNX17-206ENST00000484886 BCRP11274 1271 aa22.77■■□□□ 1.24
SNX17-206ENST00000484886 FBXO46Q6PJ61 603 aaPredicted RBP22.77■■□□□ 1.24
SNX17-206ENST00000484886 ANKRD13CQ8N6S4 541 aa22.77■■□□□ 1.24
SNX17-206ENST00000484886 KANSL2Q9H9L4 492 aa22.77■■□□□ 1.24
SNX17-206ENST00000484886 ZSWIM8A7E2V4 1837 aa22.77■■□□□ 1.24
SNX17-206ENST00000484886 HSPD1P10809 573 aaKnown RBP22.76■■□□□ 1.23
SNX17-206ENST00000484886 VCAM1P19320 739 aa22.76■■□□□ 1.23
SNX17-206ENST00000484886 HOXA7P31268 230 aaPredicted RBP22.76■■□□□ 1.23
SNX17-206ENST00000484886 PSMC4P43686 418 aa22.76■■□□□ 1.23
SNX17-206ENST00000484886 GCLCP48506 637 aaPredicted RBP22.76■■□□□ 1.23
SNX17-206ENST00000484886 CTDSPL2Q05D32 466 aa22.76■■□□□ 1.23
SNX17-206ENST00000484886 C12orf42Q96LP6 360 aa22.76■■□□□ 1.23
SNX17-206ENST00000484886 A0A1W2PRG0 241 aa22.75■■□□□ 1.23
SNX17-206ENST00000484886 USP17L15C9J2P7 530 aa22.75■■□□□ 1.23
SNX17-206ENST00000484886 USP17L13C9JLJ4 530 aa22.75■■□□□ 1.23
SNX17-206ENST00000484886 USP17L11C9JVI0 530 aa22.75■■□□□ 1.23
SNX17-206ENST00000484886 USP17L18D6R9N7 530 aa22.75■■□□□ 1.23
SNX17-206ENST00000484886 USP17L22D6RA61 530 aa22.75■■□□□ 1.23
SNX17-206ENST00000484886 USP17L17D6RBQ6 530 aa22.75■■□□□ 1.23
SNX17-206ENST00000484886 USP17L19D6RCP7 530 aa22.75■■□□□ 1.23
SNX17-206ENST00000484886 USP17L20D6RJB6 530 aa22.75■■□□□ 1.23
SNX17-206ENST00000484886 RAD21O60216 631 aa22.75■■□□□ 1.23
SNX17-206ENST00000484886 EEF2P13639 858 aaKnown RBP22.75■■□□□ 1.23
SNX17-206ENST00000484886 CAP1Q01518 475 aa22.75■■□□□ 1.23
SNX17-206ENST00000484886 USP17L24Q0WX57 530 aa22.75■■□□□ 1.23
SNX17-206ENST00000484886 ALX1Q15699 326 aa22.75■■□□□ 1.23
SNX17-206ENST00000484886 P2RX7Q99572 595 aaKnown RBP22.75■■□□□ 1.23
SNX17-206ENST00000484886 FGAP02671 866 aa22.74■■□□□ 1.23
SNX17-206ENST00000484886 TSPY3P0CV98 308 aa22.74■■□□□ 1.23
SNX17-206ENST00000484886 TSPY8P0CW00 308 aa22.74■■□□□ 1.23
SNX17-206ENST00000484886 FCGRTP55899 365 aa22.74■■□□□ 1.23
SNX17-206ENST00000484886 RPAP3Q9H6T3 665 aaPredicted RBP22.74■■□□□ 1.23
SNX17-206ENST00000484886 TOMM22Q9NS69 142 aa22.74■■□□□ 1.23
SNX17-206ENST00000484886 HPS5Q9UPZ3 1129 aa22.74■■□□□ 1.23
SNX17-206ENST00000484886 PTPN22Q9Y2R2 807 aa22.74■■□□□ 1.23
SNX17-206ENST00000484886 HERVK_113P62684 666 aa22.73■■□□□ 1.23
SNX17-206ENST00000484886 SPICE1Q8N0Z3 855 aa22.73■■□□□ 1.23
SNX17-206ENST00000484886 TRIM47Q96LD4 638 aa22.73■■□□□ 1.23
SNX17-206ENST00000484886 TANGO6Q9C0B7 1094 aa22.73■■□□□ 1.23
SNX17-206ENST00000484886 GNRH1P01148 92 aa22.72■■□□□ 1.23
SNX17-206ENST00000484886 FAM110CQ1W6H9 321 aa22.72■■□□□ 1.23
SNX17-206ENST00000484886 FAM47AQ5JRC9 791 aa22.72■■□□□ 1.23
SNX17-206ENST00000484886 SIAH1Q8IUQ4 282 aa22.72■■□□□ 1.23
SNX17-206ENST00000484886 PAGR1Q9BTK6 254 aa22.72■■□□□ 1.23
SNX17-206ENST00000484886 GOPCQ9HD26 462 aa22.72■■□□□ 1.23
SNX17-206ENST00000484886 TMX2Q9Y320 296 aa22.72■■□□□ 1.23
SNX17-206ENST00000484886 HOXD10P28358 340 aa22.71■■□□□ 1.23
SNX17-206ENST00000484886 CTGFP29279 349 aa22.71■■□□□ 1.23
SNX17-206ENST00000484886 HAND2P61296 217 aa22.71■■□□□ 1.23
SNX17-206ENST00000484886 CATSPERGQ6ZRH7 1159 aa22.71■■□□□ 1.23
SNX17-206ENST00000484886 RUFY2Q8WXA3 655 aa22.71■■□□□ 1.23
SNX17-206ENST00000484886 LPAR1Q92633 364 aa22.71■■□□□ 1.23
SNX17-206ENST00000484886 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.71■■□□□ 1.23
SNX17-206ENST00000484886 VCPKMTQ9H867 229 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms