RNA–Protein interactions for RNA: ENST00000484556.1

DDR1-245, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 1,038 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-245ENST00000484556 IL27Q8NEV9 243 aa22.28■■□□□ 1.16
DDR1-245ENST00000484556 PI4KBQ9UBF8 816 aa22.28■■□□□ 1.16
DDR1-245ENST00000484556 CDK5RAP2Q96SN8 1893 aa22.28■■□□□ 1.16
DDR1-245ENST00000484556 CLTBP09497 229 aa22.27■■□□□ 1.16
DDR1-245ENST00000484556 FPGSQ05932 587 aa22.27■■□□□ 1.16
DDR1-245ENST00000484556 USP17L2Q6R6M4 530 aa22.27■■□□□ 1.16
DDR1-245ENST00000484556 SH3RF3Q8TEJ3 882 aaPredicted RBP22.27■■□□□ 1.16
DDR1-245ENST00000484556 IGHA2P01877 340 aa22.26■■□□□ 1.15
DDR1-245ENST00000484556 RAG1P15918 1043 aa22.26■■□□□ 1.15
DDR1-245ENST00000484556 PBX2P40425 430 aa22.26■■□□□ 1.15
DDR1-245ENST00000484556 LRRC41Q15345 812 aa22.26■■□□□ 1.15
DDR1-245ENST00000484556 NSUN4Q96CB9 384 aaKnown RBP22.26■■□□□ 1.15
DDR1-245ENST00000484556 BTBD7Q9P203 1132 aa22.26■■□□□ 1.15
DDR1-245ENST00000484556 PA2G4Q9UQ80 394 aaKnown RBP22.26■■□□□ 1.15
DDR1-245ENST00000484556 TACC3Q9Y6A5 838 aa22.26■■□□□ 1.15
DDR1-245ENST00000484556 ZNF236Q9UL36 1845 aa22.25■■□□□ 1.15
DDR1-245ENST00000484556 ZBTB22O15209 634 aa22.25■■□□□ 1.15
DDR1-245ENST00000484556 SEPT4O43236 478 aa22.25■■□□□ 1.15
DDR1-245ENST00000484556 TIMM10P62072 90 aa22.25■■□□□ 1.15
DDR1-245ENST00000484556 FAM47AQ5JRC9 791 aa22.25■■□□□ 1.15
DDR1-245ENST00000484556 AKNAD1Q5T1N1 836 aa22.25■■□□□ 1.15
DDR1-245ENST00000484556 C1orf53Q5VUE5 145 aa22.25■■□□□ 1.15
DDR1-245ENST00000484556 PI16Q6UXB8 463 aa22.25■■□□□ 1.15
DDR1-245ENST00000484556 TBC1D9Q6ZT07 1266 aa22.25■■□□□ 1.15
DDR1-245ENST00000484556 C1QTNF1Q9BXJ1 281 aa22.25■■□□□ 1.15
DDR1-245ENST00000484556 MYO9BQ13459 2157 aa22.25■■□□□ 1.15
DDR1-245ENST00000484556 CHD9Q3L8U1 2897 aa22.24■■□□□ 1.15
DDR1-245ENST00000484556 GRXCR1A8MXD5 290 aa22.24■■□□□ 1.15
DDR1-245ENST00000484556 PQBP1O60828 265 aaKnown RBP22.24■■□□□ 1.15
DDR1-245ENST00000484556 MAP4K4O95819 1239 aaPredicted RBP22.24■■□□□ 1.15
DDR1-245ENST00000484556 LDHCP07864 332 aa22.24■■□□□ 1.15
DDR1-245ENST00000484556 IL15P40933 162 aaPredicted RBP22.24■■□□□ 1.15
DDR1-245ENST00000484556 GSTO1P78417 241 aa22.24■■□□□ 1.15
DDR1-245ENST00000484556 ADGRE1Q14246 886 aa22.24■■□□□ 1.15
DDR1-245ENST00000484556 CRACR2BQ8N4Y2 399 aaPredicted RBP22.24■■□□□ 1.15
DDR1-245ENST00000484556 TRIM34Q9BYJ4 488 aa22.24■■□□□ 1.15
DDR1-245ENST00000484556 FBXO3Q9UK99 471 aa22.24■■□□□ 1.15
DDR1-245ENST00000484556 SYNGAP1Q96PV0 1343 aa22.24■■□□□ 1.15
DDR1-245ENST00000484556 FOCADQ5VW36 1801 aa22.24■■□□□ 1.15
DDR1-245ENST00000484556 USP17L15C9J2P7 530 aa22.23■■□□□ 1.15
DDR1-245ENST00000484556 USP17L13C9JLJ4 530 aa22.23■■□□□ 1.15
DDR1-245ENST00000484556 USP17L11C9JVI0 530 aa22.23■■□□□ 1.15
DDR1-245ENST00000484556 USP17L18D6R9N7 530 aa22.23■■□□□ 1.15
DDR1-245ENST00000484556 USP17L22D6RA61 530 aa22.23■■□□□ 1.15
DDR1-245ENST00000484556 USP17L17D6RBQ6 530 aa22.23■■□□□ 1.15
DDR1-245ENST00000484556 USP17L19D6RCP7 530 aa22.23■■□□□ 1.15
DDR1-245ENST00000484556 USP17L20D6RJB6 530 aa22.23■■□□□ 1.15
DDR1-245ENST00000484556 KIAA0355O15063 1070 aa22.23■■□□□ 1.15
DDR1-245ENST00000484556 USP17L24Q0WX57 530 aa22.23■■□□□ 1.15
DDR1-245ENST00000484556 PRAMEF19Q5SWL8 479 aa22.23■■□□□ 1.15
DDR1-245ENST00000484556 DPP9Q86TI2 863 aa22.23■■□□□ 1.15
DDR1-245ENST00000484556 FEZ1Q99689 392 aa22.23■■□□□ 1.15
DDR1-245ENST00000484556 PBX4Q9BYU1 374 aa22.23■■□□□ 1.15
DDR1-245ENST00000484556 RAI14Q9P0K7 980 aa22.23■■□□□ 1.15
DDR1-245ENST00000484556 XIRP2A4UGR9 3374 aa22.22■■□□□ 1.15
DDR1-245ENST00000484556 IGFBP4P22692 258 aa22.22■■□□□ 1.15
DDR1-245ENST00000484556 ADORA2AP29274 412 aa22.22■■□□□ 1.15
DDR1-245ENST00000484556 OLFML2BQ68BL8 750 aa22.22■■□□□ 1.15
DDR1-245ENST00000484556 CCDC129Q6ZRS4 1044 aa22.22■■□□□ 1.15
DDR1-245ENST00000484556 MAPKAPK5Q8IW41 473 aa22.22■■□□□ 1.15
DDR1-245ENST00000484556 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.22■■□□□ 1.154e-6■■■■■ 27.2
DDR1-245ENST00000484556 DHX36Q9H2U1 1008 aaKnown RBP22.22■■□□□ 1.15
DDR1-245ENST00000484556 REV3LO60673 3130 aa22.22■■□□□ 1.15
DDR1-245ENST00000484556 MRPL50Q8N5N7 158 aaKnown RBP22.21■■□□□ 1.15
DDR1-245ENST00000484556 XAGE2Q96GT9 111 aa22.21■■□□□ 1.15
DDR1-245ENST00000484556 C12orf42Q96LP6 360 aa22.21■■□□□ 1.15
DDR1-245ENST00000484556 TMEM39AQ9NV64 488 aa22.21■■□□□ 1.15
DDR1-245ENST00000484556 HMG20BQ9P0W2 317 aa22.21■■□□□ 1.15
DDR1-245ENST00000484556 HCN4Q9Y3Q4 1203 aa22.21■■□□□ 1.15
DDR1-245ENST00000484556 A0A1B0GUL7 405 aa22.2■■□□□ 1.14
DDR1-245ENST00000484556 GH2P01242 217 aa22.2■■□□□ 1.14
DDR1-245ENST00000484556 CATSPERGQ6ZRH7 1159 aa22.2■■□□□ 1.14
DDR1-245ENST00000484556 GINM1Q9NU53 330 aa22.2■■□□□ 1.14
DDR1-245ENST00000484556 AATFQ9NY61 560 aaKnown RBP eCLIP22.2■■□□□ 1.14
DDR1-245ENST00000484556 PALD1Q9ULE6 856 aa22.2■■□□□ 1.14
DDR1-245ENST00000484556 PHF24Q9UPV7 400 aa22.2■■□□□ 1.14
DDR1-245ENST00000484556 GBF1Q92538 1859 aa22.2■■□□□ 1.14
DDR1-245ENST00000484556 SPDYE16A6NNV3 312 aaPredicted RBP22.19■■□□□ 1.14
DDR1-245ENST00000484556 VCAM1P19320 739 aa22.19■■□□□ 1.14
DDR1-245ENST00000484556 METTL16Q86W50 562 aaKnown RBP22.19■■□□□ 1.14
DDR1-245ENST00000484556 TGFBRAP1Q8WUH2 860 aa22.19■■□□□ 1.14
DDR1-245ENST00000484556 LRFN3Q9BTN0 628 aa22.19■■□□□ 1.14
DDR1-245ENST00000484556 FLT1P17948 1338 aa22.19■■□□□ 1.14
DDR1-245ENST00000484556 SMCHD1A6NHR9 2005 aa22.19■■□□□ 1.14
DDR1-245ENST00000484556 COBLO75128 1261 aa22.18■■□□□ 1.14
DDR1-245ENST00000484556 FOXP4Q8IVH2 680 aaPredicted RBP22.18■■□□□ 1.14
DDR1-245ENST00000484556 SPATA5Q8NB90 893 aa22.18■■□□□ 1.14
DDR1-245ENST00000484556 NOL10Q9BSC4 688 aaKnown RBP22.18■■□□□ 1.14
DDR1-245ENST00000484556 SAP30BPQ9UHR5 308 aaKnown RBP22.18■■□□□ 1.14
DDR1-245ENST00000484556 PTPRCP08575 1304 aa22.17■■□□□ 1.14
DDR1-245ENST00000484556 A0A1W2PQ45 241 aaPredicted RBP22.17■■□□□ 1.14
DDR1-245ENST00000484556 A0A1W2PQY0 241 aa22.17■■□□□ 1.14
DDR1-245ENST00000484556 TFF2Q03403 129 aa22.17■■□□□ 1.14
DDR1-245ENST00000484556 MVPQ14764 893 aaKnown RBP22.17■■□□□ 1.14
DDR1-245ENST00000484556 LBX2Q6XYB7 198 aa22.17■■□□□ 1.14
DDR1-245ENST00000484556 MOV10L1Q9BXT6 1211 aaKnown RBP22.17■■□□□ 1.14
DDR1-245ENST00000484556 EPHX3Q9H6B9 360 aa22.17■■□□□ 1.14
DDR1-245ENST00000484556 XPNPEP3Q9NQH7 507 aa22.17■■□□□ 1.14
DDR1-245ENST00000484556 FAAP100Q0VG06 881 aa22.16■■□□□ 1.14
DDR1-245ENST00000484556 SLC44A5Q8NCS7 719 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms