RNA–Protein interactions for RNA: ENST00000484330.5

ERCC8-206, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 3

Gene ERCC8, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-206ENST00000484330 NKG7Q16617 165 aa5.09□□□□□ -1.59
ERCC8-206ENST00000484330 LETMD1Q6P1Q0 360 aa5.09□□□□□ -1.59
ERCC8-206ENST00000484330 ZNF765Q7L2R6 523 aa5.09□□□□□ -1.59
ERCC8-206ENST00000484330 PHACTR4Q8IZ21 702 aa5.09□□□□□ -1.59
ERCC8-206ENST00000484330 CYB5D2Q8WUJ1 264 aa5.09□□□□□ -1.59
ERCC8-206ENST00000484330 CCDC74BQ96LY2 380 aa5.09□□□□□ -1.59
ERCC8-206ENST00000484330 MIPEPQ99797 713 aa5.09□□□□□ -1.59
ERCC8-206ENST00000484330 PRDM5Q9NQX1 630 aaPredicted RBP5.09□□□□□ -1.59
ERCC8-206ENST00000484330 KLHL3Q9UH77 587 aa5.09□□□□□ -1.59
ERCC8-206ENST00000484330 TPX2Q9ULW0 747 aaKnown RBP5.09□□□□□ -1.59
ERCC8-206ENST00000484330 GNAT3A8MTJ3 354 aa5.08□□□□□ -1.6
ERCC8-206ENST00000484330 IGF2BP3O00425 579 aaKnown RBP eCLIP5.08□□□□□ -1.6
ERCC8-206ENST00000484330 RAG1P15918 1043 aa5.08□□□□□ -1.6
ERCC8-206ENST00000484330 SOX9P48436 509 aa5.08□□□□□ -1.6
ERCC8-206ENST00000484330 TNNI2P48788 182 aa5.08□□□□□ -1.6
ERCC8-206ENST00000484330 ZC3H6P61129 1189 aaKnown RBP5.08□□□□□ -1.6
ERCC8-206ENST00000484330 CLCQ05315 142 aa5.08□□□□□ -1.6
ERCC8-206ENST00000484330 LCE4AQ5TA78 99 aa5.08□□□□□ -1.6
ERCC8-206ENST00000484330 FBXW10Q5XX13 1052 aa5.08□□□□□ -1.6
ERCC8-206ENST00000484330 UBE3DQ7Z6J8 389 aa5.08□□□□□ -1.6
ERCC8-206ENST00000484330 OR6P1Q8NGX9 317 aa5.08□□□□□ -1.6
ERCC8-206ENST00000484330 CPLX3Q8WVH0 158 aa5.08□□□□□ -1.6
ERCC8-206ENST00000484330 MAPK8IP1Q9UQF2 711 aa5.08□□□□□ -1.6
ERCC8-206ENST00000484330 EFR3BQ9Y2G0 817 aa5.08□□□□□ -1.6
ERCC8-206ENST00000484330 PRR19A6NJB7 356 aa5.07□□□□□ -1.6
ERCC8-206ENST00000484330 SLC22A31A6NKX4 558 aa5.07□□□□□ -1.6
ERCC8-206ENST00000484330 MEIS3P2A8K0S8 358 aa5.07□□□□□ -1.6
ERCC8-206ENST00000484330 LEFTY1O75610 366 aa5.07□□□□□ -1.6
ERCC8-206ENST00000484330 SLITRK5O94991 958 aa5.07□□□□□ -1.6
ERCC8-206ENST00000484330 GBP1P32455 592 aa5.07□□□□□ -1.6
ERCC8-206ENST00000484330 CCNFP41002 786 aa5.07□□□□□ -1.6
ERCC8-206ENST00000484330 KIR3DL1P43629 444 aa5.07□□□□□ -1.6
ERCC8-206ENST00000484330 SFRP5Q5T4F7 317 aa5.07□□□□□ -1.6
ERCC8-206ENST00000484330 CDCP2Q5VXM1 449 aa5.07□□□□□ -1.6
ERCC8-206ENST00000484330 SLC43A3Q8NBI5 491 aa5.07□□□□□ -1.6
ERCC8-206ENST00000484330 XAGE3Q8WTP9 111 aa5.07□□□□□ -1.6
ERCC8-206ENST00000484330 TMEM40Q8WWA1 233 aa5.07□□□□□ -1.6
ERCC8-206ENST00000484330 TM9SF2Q99805 663 aa5.07□□□□□ -1.6
ERCC8-206ENST00000484330 LRRC4CQ9HCJ2 640 aa5.07□□□□□ -1.6
ERCC8-206ENST00000484330 GINM1Q9NU53 330 aa5.07□□□□□ -1.6
ERCC8-206ENST00000484330 ZNRF3Q9ULT6 936 aa5.07□□□□□ -1.6
ERCC8-206ENST00000484330 CEP131Q9UPN4 1083 aa5.07□□□□□ -1.6
ERCC8-206ENST00000484330 UPK3BL1B0FP48 263 aa5.06□□□□□ -1.6
ERCC8-206ENST00000484330 CHURC1-FNTBB4DL54 471 aa5.06□□□□□ -1.6
ERCC8-206ENST00000484330 UPK3BL2E5RIL1 263 aa5.06□□□□□ -1.6
ERCC8-206ENST00000484330 RGS13O14921 159 aa5.06□□□□□ -1.6
ERCC8-206ENST00000484330 EOMESO95936 686 aa5.06□□□□□ -1.6
ERCC8-206ENST00000484330 TGFB1P01137 390 aa5.06□□□□□ -1.6
ERCC8-206ENST00000484330 NASPP49321 788 aaPredicted RBP5.06□□□□□ -1.6
ERCC8-206ENST00000484330 EIF6P56537 245 aaKnown RBP5.06□□□□□ -1.6
ERCC8-206ENST00000484330 RNF4P78317 190 aa5.06□□□□□ -1.6
ERCC8-206ENST00000484330 ARID5AQ03989 594 aa5.06□□□□□ -1.6
ERCC8-206ENST00000484330 ARSHQ5FYA8 562 aa5.06□□□□□ -1.6
ERCC8-206ENST00000484330 INTS3Q68E01 1043 aaKnown RBP5.06□□□□□ -1.6
ERCC8-206ENST00000484330 NLRC3Q7RTR2 1065 aa5.06□□□□□ -1.6
ERCC8-206ENST00000484330 RBBP8NLQ8NC74 664 aaPredicted RBP5.06□□□□□ -1.6
ERCC8-206ENST00000484330 DPH2Q9BQC3 489 aaPredicted RBP5.06□□□□□ -1.6
ERCC8-206ENST00000484330 SRRTQ9BXP5 876 aaKnown RBP5.06□□□□□ -1.6
ERCC8-206ENST00000484330 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.06□□□□□ -1.6
ERCC8-206ENST00000484330 CNNM2Q9H8M5 875 aa5.06□□□□□ -1.6
ERCC8-206ENST00000484330 TMEM265A0A087WTH1 108 aa5.05□□□□□ -1.6
ERCC8-206ENST00000484330 FAM155AB1AL88 458 aaPredicted RBP5.05□□□□□ -1.6
ERCC8-206ENST00000484330 SSBP05455 408 aaKnown RBP eCLIP5.05□□□□□ -1.6
ERCC8-206ENST00000484330 ATF4P18848 351 aaPredicted RBP5.05□□□□□ -1.6
ERCC8-206ENST00000484330 SPINK2P20155 84 aa5.05□□□□□ -1.6
ERCC8-206ENST00000484330 OVOS1Q6IE37 1185 aa5.05□□□□□ -1.6
ERCC8-206ENST00000484330 C22orf34Q6ZV56 151 aa5.05□□□□□ -1.6
ERCC8-206ENST00000484330 STK11IPQ8N1F8 1099 aa5.05□□□□□ -1.6
ERCC8-206ENST00000484330 TAB3Q8N5C8 712 aaPredicted RBP5.05□□□□□ -1.6
ERCC8-206ENST00000484330 NETO1Q8TDF5 533 aa5.05□□□□□ -1.6
ERCC8-206ENST00000484330 ATG4CQ96DT6 458 aa5.05□□□□□ -1.6
ERCC8-206ENST00000484330 MISP3Q96FF7 219 aa5.05□□□□□ -1.6
ERCC8-206ENST00000484330 DHRS1Q96LJ7 313 aa5.05□□□□□ -1.6
ERCC8-206ENST00000484330 C8orf37Q96NL8 207 aa5.05□□□□□ -1.6
ERCC8-206ENST00000484330 BSDC1Q9NW68 430 aaPredicted RBP5.05□□□□□ -1.6
ERCC8-206ENST00000484330 ADGRE2Q9UHX3 823 aa5.05□□□□□ -1.6
ERCC8-206ENST00000484330 KCNH3Q9ULD8 1083 aa5.05□□□□□ -1.6
ERCC8-206ENST00000484330 SNX11Q9Y5W9 270 aa5.05□□□□□ -1.6
ERCC8-206ENST00000484330 SLC12A7Q9Y666 1083 aa5.05□□□□□ -1.6
ERCC8-206ENST00000484330 TNFRSF10CO14798 259 aa5.04□□□□□ -1.6
ERCC8-206ENST00000484330 CEACAM5P06731 702 aa5.04□□□□□ -1.6
ERCC8-206ENST00000484330 NME1P15531 152 aaKnown RBP5.04□□□□□ -1.6
ERCC8-206ENST00000484330 IFI16Q16666 785 aaKnown RBP5.04□□□□□ -1.6
ERCC8-206ENST00000484330 FAM214BQ7L5A3 538 aa5.04□□□□□ -1.6
ERCC8-206ENST00000484330 CDH24Q86UP0 819 aa5.04□□□□□ -1.6
ERCC8-206ENST00000484330 SHISA5Q8N114 240 aa5.04□□□□□ -1.6
ERCC8-206ENST00000484330 DNAJB8Q8NHS0 232 aa5.04□□□□□ -1.6
ERCC8-206ENST00000484330 RNF141Q8WVD5 230 aa5.04□□□□□ -1.6
ERCC8-206ENST00000484330 KIF2CQ99661 725 aa5.04□□□□□ -1.6
ERCC8-206ENST00000484330 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.04□□□□□ -1.6
ERCC8-206ENST00000484330 TINF2Q9BSI4 451 aa5.04□□□□□ -1.6
ERCC8-206ENST00000484330 ASPNQ9BXN1 380 aa5.04□□□□□ -1.6
ERCC8-206ENST00000484330 PPT2Q9UMR5 302 aa5.04□□□□□ -1.6
ERCC8-206ENST00000484330 WNT11O96014 354 aa5.03□□□□□ -1.6
ERCC8-206ENST00000484330 ZNF865P0CJ78 1059 aaPredicted RBP5.03□□□□□ -1.6
ERCC8-206ENST00000484330 GIPRP48546 466 aa5.03□□□□□ -1.6
ERCC8-206ENST00000484330 CLCN7P51798 805 aa5.03□□□□□ -1.6
ERCC8-206ENST00000484330 OXCT1P55809 520 aa5.03□□□□□ -1.6
ERCC8-206ENST00000484330 OGFOD2Q6N063 350 aa5.03□□□□□ -1.6
ERCC8-206ENST00000484330 DTX1Q86Y01 620 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms