RNA–Protein interactions for RNA: ENST00000484254.1

CNTNAP3B-208, Transcript of contactin associated protein like 3B, humanhuman

TSL 3

Gene CNTNAP3B, Length 742 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-208ENST00000484254 ACER1Q8TDN7 264 aa26.47■■□□□ 1.83
CNTNAP3B-208ENST00000484254 FEZ1Q99689 392 aa26.47■■□□□ 1.83
CNTNAP3B-208ENST00000484254 KIAA1683Q9H0B3 1180 aa26.47■■□□□ 1.83
CNTNAP3B-208ENST00000484254 EFCC1Q9HA90 598 aa26.47■■□□□ 1.83
CNTNAP3B-208ENST00000484254 EMILIN3Q9NT22 766 aa26.47■■□□□ 1.83
CNTNAP3B-208ENST00000484254 A0A0D9SFI3 127 aa26.46■■□□□ 1.83
CNTNAP3B-208ENST00000484254 OSBPP22059 807 aa26.46■■□□□ 1.83
CNTNAP3B-208ENST00000484254 NMIQ13287 307 aaPredicted RBP26.46■■□□□ 1.83
CNTNAP3B-208ENST00000484254 KIF22Q14807 665 aa26.46■■□□□ 1.83
CNTNAP3B-208ENST00000484254 SMCR8Q8TEV9 937 aaPredicted RBP26.46■■□□□ 1.83
CNTNAP3B-208ENST00000484254 C12orf42Q96LP6 360 aa26.46■■□□□ 1.83
CNTNAP3B-208ENST00000484254 FOXP2O15409 715 aa26.45■■□□□ 1.82
CNTNAP3B-208ENST00000484254 CAPN15O75808 1086 aa26.45■■□□□ 1.82
CNTNAP3B-208ENST00000484254 SDSP20132 328 aa26.45■■□□□ 1.82
CNTNAP3B-208ENST00000484254 HOXA7P31268 230 aaPredicted RBP26.45■■□□□ 1.82
CNTNAP3B-208ENST00000484254 USP14P54578 494 aa26.45■■□□□ 1.82
CNTNAP3B-208ENST00000484254 NAPBQ9H115 298 aa26.45■■□□□ 1.82
CNTNAP3B-208ENST00000484254 ASCC2Q9H1I8 757 aaPredicted RBP26.45■■□□□ 1.82
CNTNAP3B-208ENST00000484254 ZYXQ15942 572 aaKnown RBP26.43■■□□□ 1.82
CNTNAP3B-208ENST00000484254 TTC22Q5TAA0 569 aa26.43■■□□□ 1.82
CNTNAP3B-208ENST00000484254 ARHGAP39Q9C0H5 1083 aa26.43■■□□□ 1.82
CNTNAP3B-208ENST00000484254 MKNK2Q9HBH9 465 aa26.43■■□□□ 1.82
CNTNAP3B-208ENST00000484254 A0A1W2PRG0 241 aa26.42■■□□□ 1.82
CNTNAP3B-208ENST00000484254 RASA1P20936 1047 aa26.42■■□□□ 1.82
CNTNAP3B-208ENST00000484254 VPS53Q5VIR6 699 aa26.42■■□□□ 1.82
CNTNAP3B-208ENST00000484254 STK11IPQ8N1F8 1099 aa26.42■■□□□ 1.82
CNTNAP3B-208ENST00000484254 ZNF287Q9HBT7 754 aa26.42■■□□□ 1.82
CNTNAP3B-208ENST00000484254 HPS5Q9UPZ3 1129 aa26.42■■□□□ 1.82
CNTNAP3B-208ENST00000484254 PTPN22Q9Y2R2 807 aa26.42■■□□□ 1.82
CNTNAP3B-208ENST00000484254 HIP1O00291 1037 aa26.41■■□□□ 1.82
CNTNAP3B-208ENST00000484254 GNRH1P01148 92 aa26.41■■□□□ 1.82
CNTNAP3B-208ENST00000484254 GCLCP48506 637 aaPredicted RBP26.41■■□□□ 1.82
CNTNAP3B-208ENST00000484254 IRX3P78415 501 aaPredicted RBP26.41■■□□□ 1.82
CNTNAP3B-208ENST00000484254 PPARAQ07869 468 aa26.41■■□□□ 1.82
CNTNAP3B-208ENST00000484254 ALX1Q15699 326 aa26.41■■□□□ 1.82
CNTNAP3B-208ENST00000484254 SIAH1Q8IUQ4 282 aa26.41■■□□□ 1.82
CNTNAP3B-208ENST00000484254 ZSWIM8A7E2V4 1837 aa26.4■■□□□ 1.82
CNTNAP3B-208ENST00000484254 CTGFP29279 349 aa26.4■■□□□ 1.82
CNTNAP3B-208ENST00000484254 PSMC4P43686 418 aa26.4■■□□□ 1.82
CNTNAP3B-208ENST00000484254 ICA1Q05084 483 aa26.4■■□□□ 1.82
CNTNAP3B-208ENST00000484254 ZNF589Q86UQ0 364 aaPredicted RBP26.4■■□□□ 1.82
CNTNAP3B-208ENST00000484254 ANKRD13CQ8N6S4 541 aa26.4■■□□□ 1.82
CNTNAP3B-208ENST00000484254 KANSL2Q9H9L4 492 aa26.4■■□□□ 1.82
CNTNAP3B-208ENST00000484254 ARHGEF10LQ9HCE6 1279 aa26.4■■□□□ 1.82
CNTNAP3B-208ENST00000484254 DIAPH3Q9NSV4 1193 aa26.4■■□□□ 1.82
CNTNAP3B-208ENST00000484254 CCDC171Q6TFL3 1326 aa26.39■■□□□ 1.82
CNTNAP3B-208ENST00000484254 CCDC85CA6NKD9 419 aa26.39■■□□□ 1.82
CNTNAP3B-208ENST00000484254 SLC3A2P08195 630 aaKnown RBP26.39■■□□□ 1.82
CNTNAP3B-208ENST00000484254 GSPT1P15170 499 aaKnown RBP26.39■■□□□ 1.82
CNTNAP3B-208ENST00000484254 MFAP1P55081 439 aaKnown RBP26.39■■□□□ 1.82
CNTNAP3B-208ENST00000484254 CLEC10AQ8IUN9 316 aa26.39■■□□□ 1.82
CNTNAP3B-208ENST00000484254 TRIM47Q96LD4 638 aa26.39■■□□□ 1.82
CNTNAP3B-208ENST00000484254 P2RX7Q99572 595 aaKnown RBP26.39■■□□□ 1.82
CNTNAP3B-208ENST00000484254 USP17L15C9J2P7 530 aa26.38■■□□□ 1.81
CNTNAP3B-208ENST00000484254 USP17L13C9JLJ4 530 aa26.38■■□□□ 1.81
CNTNAP3B-208ENST00000484254 USP17L11C9JVI0 530 aa26.38■■□□□ 1.81
CNTNAP3B-208ENST00000484254 USP17L18D6R9N7 530 aa26.38■■□□□ 1.81
CNTNAP3B-208ENST00000484254 USP17L22D6RA61 530 aa26.38■■□□□ 1.81
CNTNAP3B-208ENST00000484254 USP17L17D6RBQ6 530 aa26.38■■□□□ 1.81
CNTNAP3B-208ENST00000484254 USP17L19D6RCP7 530 aa26.38■■□□□ 1.81
CNTNAP3B-208ENST00000484254 USP17L20D6RJB6 530 aa26.38■■□□□ 1.81
CNTNAP3B-208ENST00000484254 HSPD1P10809 573 aaKnown RBP26.38■■□□□ 1.81
CNTNAP3B-208ENST00000484254 VCAM1P19320 739 aa26.38■■□□□ 1.81
CNTNAP3B-208ENST00000484254 PDE4BQ07343 736 aa26.38■■□□□ 1.81
CNTNAP3B-208ENST00000484254 USP17L24Q0WX57 530 aa26.38■■□□□ 1.81
CNTNAP3B-208ENST00000484254 FAM110CQ1W6H9 321 aa26.38■■□□□ 1.81
CNTNAP3B-208ENST00000484254 ZNF444Q8N0Y2 327 aaPredicted RBP26.38■■□□□ 1.81
CNTNAP3B-208ENST00000484254 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.38■■□□□ 1.81
CNTNAP3B-208ENST00000484254 SH2D4AQ9H788 454 aa26.38■■□□□ 1.81
CNTNAP3B-208ENST00000484254 TMX2Q9Y320 296 aa26.38■■□□□ 1.81
CNTNAP3B-208ENST00000484254 GREB1LQ9C091 1923 aaPredicted RBP26.37■■□□□ 1.81
CNTNAP3B-208ENST00000484254 FMNL1O95466 1100 aaPredicted RBP26.37■■□□□ 1.81
CNTNAP3B-208ENST00000484254 HERVK_113P62684 666 aa26.37■■□□□ 1.81
CNTNAP3B-208ENST00000484254 CWC27Q6UX04 472 aaKnown RBP26.37■■□□□ 1.81
CNTNAP3B-208ENST00000484254 CENPQQ7L2Z9 268 aaPredicted RBP26.37■■□□□ 1.81
CNTNAP3B-208ENST00000484254 PRDM1O75626 825 aa26.36■■□□□ 1.81
CNTNAP3B-208ENST00000484254 ECM2O94769 699 aaPredicted RBP26.36■■□□□ 1.81
CNTNAP3B-208ENST00000484254 EEF2P13639 858 aaKnown RBP26.36■■□□□ 1.81
CNTNAP3B-208ENST00000484254 FCGRTP55899 365 aa26.36■■□□□ 1.81
CNTNAP3B-208ENST00000484254 CATSPERGQ6ZRH7 1159 aa26.36■■□□□ 1.81
CNTNAP3B-208ENST00000484254 ANAPC4Q9UJX5 808 aa26.36■■□□□ 1.81
CNTNAP3B-208ENST00000484254 FGAP02671 866 aa26.35■■□□□ 1.81
CNTNAP3B-208ENST00000484254 HOXD10P28358 340 aa26.35■■□□□ 1.81
CNTNAP3B-208ENST00000484254 PRMT2P55345 433 aa26.35■■□□□ 1.81
CNTNAP3B-208ENST00000484254 GTF3C2Q8WUA4 911 aaPredicted RBP26.35■■□□□ 1.81
CNTNAP3B-208ENST00000484254 RPAP3Q9H6T3 665 aaPredicted RBP26.35■■□□□ 1.81
CNTNAP3B-208ENST00000484254 MORF4L1Q9UBU8 362 aa26.35■■□□□ 1.81
CNTNAP3B-208ENST00000484254 ZMYM6O95789 1325 aa26.35■■□□□ 1.81
CNTNAP3B-208ENST00000484254 MGAMO43451 1857 aa26.34■■□□□ 1.81
CNTNAP3B-208ENST00000484254 KIAA1755Q5JYT7 1200 aa26.34■■□□□ 1.81
CNTNAP3B-208ENST00000484254 LPAR1Q92633 364 aa26.34■■□□□ 1.81
CNTNAP3B-208ENST00000484254 VCPKMTQ9H867 229 aa26.34■■□□□ 1.81
CNTNAP3B-208ENST00000484254 SRRDQ9UH36 339 aa26.34■■□□□ 1.81
CNTNAP3B-208ENST00000484254 IGKV6D-41A0A0C4DH26 115 aa26.33■■□□□ 1.81
CNTNAP3B-208ENST00000484254 ATP2B2Q01814 1243 aa26.33■■□□□ 1.81
CNTNAP3B-208ENST00000484254 CTDSPL2Q05D32 466 aa26.33■■□□□ 1.81
CNTNAP3B-208ENST00000484254 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.33■■□□□ 1.81
CNTNAP3B-208ENST00000484254 PTCH2Q9Y6C5 1203 aa26.33■■□□□ 1.81
CNTNAP3B-208ENST00000484254 NYAP2Q9P242 653 aa26.32■■□□□ 1.8
CNTNAP3B-208ENST00000484254 RBPJLQ9UBG7 517 aa26.32■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms