RNA–Protein interactions for RNA: ENST00000484134.5

RPUSD3-216, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,491 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-216ENST00000484134 RIPOR2Q9Y4F9 1068 aa22.4■■□□□ 1.18
RPUSD3-216ENST00000484134 TCRBV5S4A2TA0A5A2 114 aa22.39■■□□□ 1.18
RPUSD3-216ENST00000484134 CNGA4Q8IV77 575 aa22.39■■□□□ 1.18
RPUSD3-216ENST00000484134 WASF1Q92558 559 aa22.39■■□□□ 1.18
RPUSD3-216ENST00000484134 ANKRD65E5RJM6 399 aa22.39■■□□□ 1.17
RPUSD3-216ENST00000484134 METTL24Q5JXM2 366 aa22.39■■□□□ 1.17
RPUSD3-216ENST00000484134 TUBB4BP68371 445 aa22.38■■□□□ 1.17
RPUSD3-216ENST00000484134 IFIT5Q13325 482 aaKnown RBP22.38■■□□□ 1.17
RPUSD3-216ENST00000484134 CHRNA2Q15822 529 aa22.38■■□□□ 1.17
RPUSD3-216ENST00000484134 PLEKHA4Q9H4M7 779 aa22.38■■□□□ 1.17
RPUSD3-216ENST00000484134 FAM204AQ9H8W3 233 aa22.38■■□□□ 1.17
RPUSD3-216ENST00000484134 CSF1RP07333 972 aa22.38■■□□□ 1.17
RPUSD3-216ENST00000484134 PIP4K2BP78356 416 aa22.38■■□□□ 1.17
RPUSD3-216ENST00000484134 EARS2Q5JPH6 523 aaKnown RBP22.38■■□□□ 1.17
RPUSD3-216ENST00000484134 CRACR2BQ8N4Y2 399 aaPredicted RBP22.38■■□□□ 1.17
RPUSD3-216ENST00000484134 SLF1Q9BQI6 1058 aa22.38■■□□□ 1.17
RPUSD3-216ENST00000484134 TRIM10Q9UDY6 481 aa22.38■■□□□ 1.17
RPUSD3-216ENST00000484134 MYO6Q9UM54 1294 aa22.38■■□□□ 1.17
RPUSD3-216ENST00000484134 FER1L4A9Z1Z3 1794 aa22.38■■□□□ 1.17
RPUSD3-216ENST00000484134 RTN1Q16799 776 aa22.37■■□□□ 1.17
RPUSD3-216ENST00000484134 HSP90B2PQ58FF3 399 aa22.37■■□□□ 1.17
RPUSD3-216ENST00000484134 ANKLE2Q86XL3 938 aa22.37■■□□□ 1.17
RPUSD3-216ENST00000484134 TMTC1Q8IUR5 882 aa22.37■■□□□ 1.17
RPUSD3-216ENST00000484134 CCDC51Q96ER9 411 aa22.37■■□□□ 1.17
RPUSD3-216ENST00000484134 CTAGE1Q96RT6 745 aa22.37■■□□□ 1.17
RPUSD3-216ENST00000484134 ABHD10Q9NUJ1 306 aa22.37■■□□□ 1.17
RPUSD3-216ENST00000484134 WDR17Q8IZU2 1322 aa22.37■■□□□ 1.17
RPUSD3-216ENST00000484134 LRP6O75581 1613 aa22.37■■□□□ 1.17
RPUSD3-216ENST00000484134 EIF3CLB5ME19 914 aaKnown RBP22.37■■□□□ 1.17
RPUSD3-216ENST00000484134 TCIRG1Q13488 830 aa22.37■■□□□ 1.17
RPUSD3-216ENST00000484134 KRT31Q15323 416 aa22.37■■□□□ 1.17
RPUSD3-216ENST00000484134 FILIP1LQ4L180 1135 aa22.37■■□□□ 1.17
RPUSD3-216ENST00000484134 CERS3Q8IU89 383 aa22.37■■□□□ 1.17
RPUSD3-216ENST00000484134 TRIM22Q8IYM9 498 aa22.37■■□□□ 1.17
RPUSD3-216ENST00000484134 IFNL3Q8IZI9 196 aa22.37■■□□□ 1.17
RPUSD3-216ENST00000484134 STAMQ92783 540 aa22.37■■□□□ 1.17
RPUSD3-216ENST00000484134 EIF3CQ99613 913 aaKnown RBP22.37■■□□□ 1.17
RPUSD3-216ENST00000484134 AATFQ9NY61 560 aaKnown RBP eCLIP22.37■■□□□ 1.17
RPUSD3-216ENST00000484134 TBC1D2BQ9UPU7 963 aa22.37■■□□□ 1.17
RPUSD3-216ENST00000484134 WNT7AO00755 349 aa22.36■■□□□ 1.17
RPUSD3-216ENST00000484134 SYF2O95926 243 aaKnown RBP22.36■■□□□ 1.17
RPUSD3-216ENST00000484134 CT47A1Q5JQC4 288 aaPredicted RBP22.36■■□□□ 1.17
RPUSD3-216ENST00000484134 WDR93Q6P2C0 686 aa22.36■■□□□ 1.17
RPUSD3-216ENST00000484134 PACS2Q86VP3 889 aa22.36■■□□□ 1.17
RPUSD3-216ENST00000484134 CABLES1Q8TDN4 633 aa22.36■■□□□ 1.17
RPUSD3-216ENST00000484134 GBP3Q9H0R5 595 aa22.36■■□□□ 1.17
RPUSD3-216ENST00000484134 REXO2Q9Y3B8 237 aaKnown RBP22.36■■□□□ 1.17
RPUSD3-216ENST00000484134 ITIH6Q6UXX5 1313 aa22.36■■□□□ 1.17
RPUSD3-216ENST00000484134 PHKA1P46020 1223 aa22.36■■□□□ 1.17
RPUSD3-216ENST00000484134 ALX1Q15699 326 aa22.36■■□□□ 1.17
RPUSD3-216ENST00000484134 SYMPKQ92797 1274 aaKnown RBP22.36■■□□□ 1.17
RPUSD3-216ENST00000484134 AIDAQ96BJ3 306 aa22.36■■□□□ 1.17
RPUSD3-216ENST00000484134 RNF216Q9NWF9 866 aaPredicted RBP22.36■■□□□ 1.17
RPUSD3-216ENST00000484134 CTNND2Q9UQB3 1225 aa22.36■■□□□ 1.17
RPUSD3-216ENST00000484134 SEMA3EO15041 775 aa22.35■■□□□ 1.17
RPUSD3-216ENST00000484134 LDHAL6AQ6ZMR3 332 aa22.35■■□□□ 1.17
RPUSD3-216ENST00000484134 TTLL11Q8NHH1 800 aa22.35■■□□□ 1.17
RPUSD3-216ENST00000484134 CHP1Q99653 195 aa22.35■■□□□ 1.17
RPUSD3-216ENST00000484134 VPS16Q9H269 839 aa22.35■■□□□ 1.17
RPUSD3-216ENST00000484134 HDAC6Q9UBN7 1215 aa22.35■■□□□ 1.17
RPUSD3-216ENST00000484134 DEXIO95424 95 aa22.35■■□□□ 1.17
RPUSD3-216ENST00000484134 MAGEA9P43362 315 aa22.35■■□□□ 1.17
RPUSD3-216ENST00000484134 TTF1Q15361 905 aaPredicted RBP22.35■■□□□ 1.17
RPUSD3-216ENST00000484134 RRP12Q5JTH9 1297 aaKnown RBP22.35■■□□□ 1.17
RPUSD3-216ENST00000484134 CEP131Q9UPN4 1083 aa22.35■■□□□ 1.17
RPUSD3-216ENST00000484134 NID2Q14112 1375 aa22.35■■□□□ 1.17
RPUSD3-216ENST00000484134 PATL2C9JE40 543 aaKnown RBP22.34■■□□□ 1.17
RPUSD3-216ENST00000484134 N4BP3O15049 544 aa22.34■■□□□ 1.17
RPUSD3-216ENST00000484134 RNF40O75150 1001 aa22.34■■□□□ 1.17
RPUSD3-216ENST00000484134 AKNAD1Q5T1N1 836 aa22.34■■□□□ 1.17
RPUSD3-216ENST00000484134 MED4Q9NPJ6 270 aa22.34■■□□□ 1.17
RPUSD3-216ENST00000484134 MKRN1Q9UHC7 482 aaKnown RBP22.34■■□□□ 1.17
RPUSD3-216ENST00000484134 ZNF330Q9Y3S2 320 aaPredicted RBP22.34■■□□□ 1.17
RPUSD3-216ENST00000484134 PRPF6O94906 941 aaKnown RBP22.34■■□□□ 1.17
RPUSD3-216ENST00000484134 CYP26C1Q6V0L0 522 aa22.34■■□□□ 1.17
RPUSD3-216ENST00000484134 DDX17Q92841 729 aaKnown RBP22.34■■□□□ 1.17
RPUSD3-216ENST00000484134 ZNF512BQ96KM6 892 aaPredicted RBP22.34■■□□□ 1.17
RPUSD3-216ENST00000484134 GSDMAQ96QA5 445 aa22.34■■□□□ 1.17
RPUSD3-216ENST00000484134 NAPBQ9H115 298 aa22.34■■□□□ 1.17
RPUSD3-216ENST00000484134 GREM2Q9H772 168 aa22.34■■□□□ 1.17
RPUSD3-216ENST00000484134 MYO1AQ9UBC5 1043 aa22.34■■□□□ 1.17
RPUSD3-216ENST00000484134 LRRC10BA6NIK2 292 aa22.33■■□□□ 1.17
RPUSD3-216ENST00000484134 ENC1O14682 589 aa22.33■■□□□ 1.17
RPUSD3-216ENST00000484134 VGLL2Q8N8G2 317 aa22.33■■□□□ 1.17
RPUSD3-216ENST00000484134 NUP88Q99567 741 aaPredicted RBP22.33■■□□□ 1.17
RPUSD3-216ENST00000484134 LIMA1Q9UHB6 759 aaKnown RBP22.33■■□□□ 1.17
RPUSD3-216ENST00000484134 TFR2Q9UP52 801 aa22.33■■□□□ 1.17
RPUSD3-216ENST00000484134 ZC3H4Q9UPT8 1303 aaKnown RBP22.33■■□□□ 1.17
RPUSD3-216ENST00000484134 TRIM75PA6NK02 468 aa22.33■■□□□ 1.16
RPUSD3-216ENST00000484134 PRKAB2O43741 272 aa22.33■■□□□ 1.16
RPUSD3-216ENST00000484134 MBD4O95243 580 aa22.33■■□□□ 1.16
RPUSD3-216ENST00000484134 PCCAP05165 728 aaPredicted RBP22.33■■□□□ 1.16
RPUSD3-216ENST00000484134 PLA2G12BQ9BX93 195 aa22.33■■□□□ 1.16
RPUSD3-216ENST00000484134 ARMT1Q9H993 441 aa22.33■■□□□ 1.16
RPUSD3-216ENST00000484134 TAB2Q9NYJ8 693 aa22.33■■□□□ 1.16
RPUSD3-216ENST00000484134 GUCA1BQ9UMX6 200 aa22.33■■□□□ 1.16
RPUSD3-216ENST00000484134 AARSP49588 968 aaKnown RBP eCLIP22.32■■□□□ 1.16
RPUSD3-216ENST00000484134 USP14P54578 494 aa22.32■■□□□ 1.16
RPUSD3-216ENST00000484134 CORO7P57737 925 aa22.32■■□□□ 1.16
RPUSD3-216ENST00000484134 AKAP17AQ02040 695 aaKnown RBP22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms