RNA–Protein interactions for RNA: ENST00000484023.1

ATP13A3-207, Transcript of ATPase 13A3, humanhuman

TSL 2

Gene ATP13A3, Length 522 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-207ENST00000484023 CEACAM5P06731 702 aa8.72□□□□□ -1.01
ATP13A3-207ENST00000484023 POLR2BP30876 1174 aaKnown RBP8.72□□□□□ -1.01
ATP13A3-207ENST00000484023 MLECQ14165 292 aa8.72□□□□□ -1.01
ATP13A3-207ENST00000484023 SFRP5Q5T4F7 317 aa8.72□□□□□ -1.01
ATP13A3-207ENST00000484023 CCDC81Q6ZN84 652 aa8.72□□□□□ -1.01
ATP13A3-207ENST00000484023 NETO1Q8TDF5 533 aa8.72□□□□□ -1.01
ATP13A3-207ENST00000484023 ZNRF3Q9ULT6 936 aa8.72□□□□□ -1.01
ATP13A3-207ENST00000484023 NKPD1Q17RQ9 610 aa8.71□□□□□ -1.02
ATP13A3-207ENST00000484023 FBXW10Q5XX13 1052 aa8.71□□□□□ -1.02
ATP13A3-207ENST00000484023 SPACA3Q8IXA5 215 aa8.71□□□□□ -1.02
ATP13A3-207ENST00000484023 TMEM40Q8WWA1 233 aa8.71□□□□□ -1.02
ATP13A3-207ENST00000484023 CCDC74BQ96LY2 380 aa8.71□□□□□ -1.02
ATP13A3-207ENST00000484023 FERD3LQ96RJ6 166 aa8.71□□□□□ -1.02
ATP13A3-207ENST00000484023 CNNM2Q9H8M5 875 aa8.71□□□□□ -1.02
ATP13A3-207ENST00000484023 MKNK2Q9HBH9 465 aa8.71□□□□□ -1.02
ATP13A3-207ENST00000484023 MEIS3P2A8K0S8 358 aa8.7□□□□□ -1.02
ATP13A3-207ENST00000484023 UBOX5O94941 541 aa8.7□□□□□ -1.02
ATP13A3-207ENST00000484023 RAG1P15918 1043 aa8.7□□□□□ -1.02
ATP13A3-207ENST00000484023 SOX9P48436 509 aa8.7□□□□□ -1.02
ATP13A3-207ENST00000484023 BNIP3Q12983 259 aa8.7□□□□□ -1.02
ATP13A3-207ENST00000484023 CDCP2Q5VXM1 449 aa8.7□□□□□ -1.02
ATP13A3-207ENST00000484023 NFXL1Q6ZNB6 911 aa8.7□□□□□ -1.02
ATP13A3-207ENST00000484023 CAPN10Q9HC96 672 aa8.7□□□□□ -1.02
ATP13A3-207ENST00000484023 BSDC1Q9NW68 430 aaPredicted RBP8.7□□□□□ -1.02
ATP13A3-207ENST00000484023 CCDC39Q9UFE4 941 aa8.7□□□□□ -1.02
ATP13A3-207ENST00000484023 COL17A1Q9UMD9 1497 aaPredicted RBP8.7□□□□□ -1.02
ATP13A3-207ENST00000484023 GNAT3A8MTJ3 354 aa8.69□□□□□ -1.02
ATP13A3-207ENST00000484023 RGS13O14921 159 aa8.69□□□□□ -1.02
ATP13A3-207ENST00000484023 ZNF865P0CJ78 1059 aaPredicted RBP8.69□□□□□ -1.02
ATP13A3-207ENST00000484023 NME1P15531 152 aaKnown RBP8.69□□□□□ -1.02
ATP13A3-207ENST00000484023 GBP1P32455 592 aa8.69□□□□□ -1.02
ATP13A3-207ENST00000484023 CD96P40200 585 aa8.69□□□□□ -1.02
ATP13A3-207ENST00000484023 NASPP49321 788 aaPredicted RBP8.69□□□□□ -1.02
ATP13A3-207ENST00000484023 IFI16Q16666 785 aaKnown RBP8.69□□□□□ -1.02
ATP13A3-207ENST00000484023 ZNF746Q6NUN9 644 aaPredicted RBP8.69□□□□□ -1.02
ATP13A3-207ENST00000484023 NLRC3Q7RTR2 1065 aa8.69□□□□□ -1.02
ATP13A3-207ENST00000484023 TNKS2Q9H2K2 1166 aa8.69□□□□□ -1.02
ATP13A3-207ENST00000484023 CAPN6Q9Y6Q1 641 aa8.69□□□□□ -1.02
ATP13A3-207ENST00000484023 LRRN2O75325 713 aa8.68□□□□□ -1.02
ATP13A3-207ENST00000484023 PRNPP04156 253 aa8.68□□□□□ -1.02
ATP13A3-207ENST00000484023 ETV3P41162 512 aa8.68□□□□□ -1.02
ATP13A3-207ENST00000484023 ZNF574Q6ZN55 896 aaPredicted RBP8.68□□□□□ -1.02
ATP13A3-207ENST00000484023 RUFY4Q6ZNE9 571 aa8.68□□□□□ -1.02
ATP13A3-207ENST00000484023 WFDC3Q8IUB2 231 aa8.68□□□□□ -1.02
ATP13A3-207ENST00000484023 MFSD4AQ8N468 514 aa8.68□□□□□ -1.02
ATP13A3-207ENST00000484023 BCL7CQ8WUZ0 217 aaPredicted RBP8.68□□□□□ -1.02
ATP13A3-207ENST00000484023 Q96M66 194 aa8.68□□□□□ -1.02
ATP13A3-207ENST00000484023 FAM86C2PA6NEL3 165 aa8.67□□□□□ -1.02
ATP13A3-207ENST00000484023 ACRP10323 421 aa8.67□□□□□ -1.02
ATP13A3-207ENST00000484023 CYP7A1P22680 504 aa8.67□□□□□ -1.02
ATP13A3-207ENST00000484023 COL9A2Q14055 689 aaPredicted RBP8.67□□□□□ -1.02
ATP13A3-207ENST00000484023 LRRFIP1Q32MZ4 808 aaKnown RBP8.67□□□□□ -1.02
ATP13A3-207ENST00000484023 CDKAL1Q5VV42 579 aa8.67□□□□□ -1.02
ATP13A3-207ENST00000484023 C22orf34Q6ZV56 151 aa8.67□□□□□ -1.02
ATP13A3-207ENST00000484023 SPRED2Q7Z698 418 aa8.67□□□□□ -1.02
ATP13A3-207ENST00000484023 KREMEN1Q96MU8 473 aa8.67□□□□□ -1.02
ATP13A3-207ENST00000484023 SLC9A7Q96T83 725 aa8.67□□□□□ -1.02
ATP13A3-207ENST00000484023 TINF2Q9BSI4 451 aa8.67□□□□□ -1.02
ATP13A3-207ENST00000484023 TNK2Q07912 1038 aa8.66□□□□□ -1.02
ATP13A3-207ENST00000484023 LSRQ86X29 649 aaPredicted RBP8.66□□□□□ -1.02
ATP13A3-207ENST00000484023 SPATA32Q96LK8 384 aa8.66□□□□□ -1.02
ATP13A3-207ENST00000484023 HSPA12BQ96MM6 686 aa8.66□□□□□ -1.02
ATP13A3-207ENST00000484023 TMEM265A0A087WTH1 108 aa8.65□□□□□ -1.02
ATP13A3-207ENST00000484023 FAM155AB1AL88 458 aaPredicted RBP8.65□□□□□ -1.02
ATP13A3-207ENST00000484023 TNFRSF10CO14798 259 aa8.65□□□□□ -1.02
ATP13A3-207ENST00000484023 WNT11O96014 354 aa8.65□□□□□ -1.02
ATP13A3-207ENST00000484023 IMPDH2P12268 514 aa8.65□□□□□ -1.02
ATP13A3-207ENST00000484023 PRKCQQ04759 706 aa8.65□□□□□ -1.02
ATP13A3-207ENST00000484023 AOC3Q16853 763 aa8.65□□□□□ -1.02
ATP13A3-207ENST00000484023 VSIG10LQ86VR7 867 aa8.65□□□□□ -1.02
ATP13A3-207ENST00000484023 TMEM192Q8IY95 271 aa8.65□□□□□ -1.02
ATP13A3-207ENST00000484023 VWCEQ96DN2 955 aa8.65□□□□□ -1.02
ATP13A3-207ENST00000484023 HRASLS5Q96KN8 279 aa8.65□□□□□ -1.02
ATP13A3-207ENST00000484023 ANGEL1Q9UNK9 670 aaKnown RBP8.65□□□□□ -1.02
ATP13A3-207ENST00000484023 ST14Q9Y5Y6 855 aa8.65□□□□□ -1.02
ATP13A3-207ENST00000484023 H3BS24 57 aa8.64□□□□□ -1.03
ATP13A3-207ENST00000484023 ATF4P18848 351 aaPredicted RBP8.64□□□□□ -1.03
ATP13A3-207ENST00000484023 KIR3DL1P43629 444 aa8.64□□□□□ -1.03
ATP13A3-207ENST00000484023 RBBP8NLQ8NC74 664 aaPredicted RBP8.64□□□□□ -1.03
ATP13A3-207ENST00000484023 FLCNQ8NFG4 579 aa8.64□□□□□ -1.03
ATP13A3-207ENST00000484023 RNF141Q8WVD5 230 aa8.64□□□□□ -1.03
ATP13A3-207ENST00000484023 ZNF512BQ96KM6 892 aaPredicted RBP8.64□□□□□ -1.03
ATP13A3-207ENST00000484023 SRRTQ9BXP5 876 aaKnown RBP8.64□□□□□ -1.03
ATP13A3-207ENST00000484023 VAV3Q9UKW4 847 aa8.64□□□□□ -1.03
ATP13A3-207ENST00000484023 SLC5A6Q9Y289 635 aa8.64□□□□□ -1.03
ATP13A3-207ENST00000484023 WASH4PA8MWX3 477 aa8.63□□□□□ -1.03
ATP13A3-207ENST00000484023 CD8BP10966 210 aa8.63□□□□□ -1.03
ATP13A3-207ENST00000484023 EIF6P56537 245 aaKnown RBP8.63□□□□□ -1.03
ATP13A3-207ENST00000484023 ZYXQ15942 572 aaKnown RBP8.63□□□□□ -1.03
ATP13A3-207ENST00000484023 DTWD2Q8NBA8 298 aa8.63□□□□□ -1.03
ATP13A3-207ENST00000484023 SEC16BQ96JE7 1060 aa8.63□□□□□ -1.03
ATP13A3-207ENST00000484023 COX4I2Q96KJ9 171 aa8.63□□□□□ -1.03
ATP13A3-207ENST00000484023 PAK6Q9NQU5 681 aaPredicted RBP8.63□□□□□ -1.03
ATP13A3-207ENST00000484023 SEMA3GQ9NS98 782 aa8.63□□□□□ -1.03
ATP13A3-207ENST00000484023 SNX11Q9Y5W9 270 aa8.63□□□□□ -1.03
ATP13A3-207ENST00000484023 PITPNM2Q9BZ72 1349 aa8.62□□□□□ -1.03
ATP13A3-207ENST00000484023 LOC100996750A0A140TA64 210 aa8.62□□□□□ -1.03
ATP13A3-207ENST00000484023 GIPRP48546 466 aa8.62□□□□□ -1.03
ATP13A3-207ENST00000484023 CLCN7P51798 805 aa8.62□□□□□ -1.03
ATP13A3-207ENST00000484023 GP2P55259 537 aaKnown RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms