RNA–Protein interactions for RNA: ENST00000483671.1

RFTN1-209, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 2

Gene RFTN1, Length 1,314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-209ENST00000483671 MYH8P13535 1937 aa18.92■□□□□ 0.62
RFTN1-209ENST00000483671 AKR1B1P15121 316 aa18.92■□□□□ 0.62
RFTN1-209ENST00000483671 ADD1P35611 737 aaKnown RBP18.92■□□□□ 0.62
RFTN1-209ENST00000483671 LARP1BQ659C4 914 aaKnown RBP18.92■□□□□ 0.62
RFTN1-209ENST00000483671 MYL10Q9BUA6 226 aa18.92■□□□□ 0.62
RFTN1-209ENST00000483671 KAT14Q9H8E8 782 aa18.92■□□□□ 0.62
RFTN1-209ENST00000483671 VEZTQ9HBM0 779 aa18.92■□□□□ 0.62
RFTN1-209ENST00000483671 MTMR4Q9NYA4 1195 aa18.92■□□□□ 0.62
RFTN1-209ENST00000483671 FDPSP14324 419 aaKnown RBP18.91■□□□□ 0.62
RFTN1-209ENST00000483671 SAMD7Q7Z3H4 446 aa18.91■□□□□ 0.62
RFTN1-209ENST00000483671 RAB11FIP4Q86YS3 637 aa18.91■□□□□ 0.62
RFTN1-209ENST00000483671 CEP95Q96GE4 821 aa18.91■□□□□ 0.62
RFTN1-209ENST00000483671 TMEM47Q9BQJ4 181 aa18.91■□□□□ 0.62
RFTN1-209ENST00000483671 TRIM34Q9BYJ4 488 aa18.91■□□□□ 0.62
RFTN1-209ENST00000483671 MTMR6Q9Y217 621 aa18.91■□□□□ 0.62
RFTN1-209ENST00000483671 ZSCAN22P10073 491 aaPredicted RBP18.9■□□□□ 0.62
RFTN1-209ENST00000483671 TOP1P11387 765 aaKnown RBP18.9■□□□□ 0.62
RFTN1-209ENST00000483671 RXRAP19793 462 aa18.9■□□□□ 0.62
RFTN1-209ENST00000483671 GPR162Q16538 588 aa18.9■□□□□ 0.62
RFTN1-209ENST00000483671 CERKLQ49MI3 558 aaPredicted RBP18.9■□□□□ 0.62
RFTN1-209ENST00000483671 TBC1D10BQ4KMP7 808 aaPredicted RBP18.9■□□□□ 0.62
RFTN1-209ENST00000483671 FAM184AQ8NB25 1140 aa18.9■□□□□ 0.62
RFTN1-209ENST00000483671 PNMA1Q8ND90 353 aa18.9■□□□□ 0.62
RFTN1-209ENST00000483671 DDX11Q96FC9 970 aa18.9■□□□□ 0.62
RFTN1-209ENST00000483671 FUT2Q10981 343 aa18.89■□□□□ 0.61
RFTN1-209ENST00000483671 NUP133Q8WUM0 1156 aa18.89■□□□□ 0.61
RFTN1-209ENST00000483671 L3MBTL3Q96JM7 780 aaPredicted RBP18.89■□□□□ 0.61
RFTN1-209ENST00000483671 TMEM39BQ9GZU3 492 aa18.89■□□□□ 0.61
RFTN1-209ENST00000483671 ORC3Q9UBD5 711 aaPredicted RBP18.89■□□□□ 0.61
RFTN1-209ENST00000483671 STX8Q9UNK0 236 aa18.89■□□□□ 0.61
RFTN1-209ENST00000483671 FMNL1O95466 1100 aaPredicted RBP18.88■□□□□ 0.61
RFTN1-209ENST00000483671 TTLL1O95922 423 aa18.88■□□□□ 0.61
RFTN1-209ENST00000483671 KIF5BP33176 963 aa18.88■□□□□ 0.61
RFTN1-209ENST00000483671 RASA3Q14644 834 aa18.88■□□□□ 0.61
RFTN1-209ENST00000483671 GRM4Q14833 912 aa18.88■□□□□ 0.61
RFTN1-209ENST00000483671 RBM26Q5T8P6 1007 aaKnown RBP18.88■□□□□ 0.61
RFTN1-209ENST00000483671 TMEM179Q6ZVK1 233 aa18.88■□□□□ 0.61
RFTN1-209ENST00000483671 TMTC3Q6ZXV5 915 aa18.88■□□□□ 0.61
RFTN1-209ENST00000483671 NBPF11Q86T75 865 aa18.88■□□□□ 0.61
RFTN1-209ENST00000483671 APOBEC3FQ8IUX4 373 aaKnown RBP18.88■□□□□ 0.61
RFTN1-209ENST00000483671 CCDC144CPQ8IYA2 1237 aa18.88■□□□□ 0.61
RFTN1-209ENST00000483671 CTCFLQ8NI51 663 aaPredicted RBP18.88■□□□□ 0.61
RFTN1-209ENST00000483671 TEPSINQ96N21 525 aa18.88■□□□□ 0.61
RFTN1-209ENST00000483671 GBP4Q96PP9 640 aa18.88■□□□□ 0.61
RFTN1-209ENST00000483671 HACL1Q9UJ83 578 aa18.88■□□□□ 0.61
RFTN1-209ENST00000483671 DDNO94850 711 aaPredicted RBP18.87■□□□□ 0.61
RFTN1-209ENST00000483671 NFKBIBQ15653 356 aa18.87■□□□□ 0.61
RFTN1-209ENST00000483671 TRPM4Q8TD43 1214 aa18.87■□□□□ 0.61
RFTN1-209ENST00000483671 MKL1Q969V6 931 aa18.87■□□□□ 0.61
RFTN1-209ENST00000483671 RNF26Q9BY78 433 aaPredicted RBP18.87■□□□□ 0.61
RFTN1-209ENST00000483671 KANSL2Q9H9L4 492 aa18.87■□□□□ 0.61
RFTN1-209ENST00000483671 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.87■□□□□ 0.61
RFTN1-209ENST00000483671 SYNPO2Q9UMS6 1093 aa18.87■□□□□ 0.61
RFTN1-209ENST00000483671 PITPNM2Q9BZ72 1349 aa18.86■□□□□ 0.61
RFTN1-209ENST00000483671 FAM196BA6NMK8 535 aa18.86■□□□□ 0.61
RFTN1-209ENST00000483671 F13A1P00488 732 aa18.86■□□□□ 0.61
RFTN1-209ENST00000483671 EPS15P42566 896 aa18.86■□□□□ 0.61
RFTN1-209ENST00000483671 GNAQP50148 359 aa18.86■□□□□ 0.61
RFTN1-209ENST00000483671 SSRP1Q08945 709 aaKnown RBP18.86■□□□□ 0.61
RFTN1-209ENST00000483671 TRIM22Q8IYM9 498 aa18.86■□□□□ 0.61
RFTN1-209ENST00000483671 WASF1Q92558 559 aa18.86■□□□□ 0.61
RFTN1-209ENST00000483671 ADARB2Q9NS39 739 aaKnown RBP18.86■□□□□ 0.61
RFTN1-209ENST00000483671 NYAP2Q9P242 653 aa18.86■□□□□ 0.61
RFTN1-209ENST00000483671 ATP6V1DQ9Y5K8 247 aa18.86■□□□□ 0.61
RFTN1-209ENST00000483671 PPP2R3BQ9Y5P8 575 aa18.86■□□□□ 0.61
RFTN1-209ENST00000483671 PALM3A6NDB9 673 aaPredicted RBP18.85■□□□□ 0.61
RFTN1-209ENST00000483671 DTNBO60941 627 aa18.85■□□□□ 0.61
RFTN1-209ENST00000483671 BAG4O95429 457 aaKnown RBP18.85■□□□□ 0.61
RFTN1-209ENST00000483671 SLURP2P0DP57 97 aa18.85■□□□□ 0.61
RFTN1-209ENST00000483671 LMOD1P29536 600 aaPredicted RBP18.85■□□□□ 0.61
RFTN1-209ENST00000483671 ABCB5Q2M3G0 1257 aa18.85■□□□□ 0.61
RFTN1-209ENST00000483671 DPY19L2Q6NUT2 758 aa18.85■□□□□ 0.61
RFTN1-209ENST00000483671 LZTS2Q9BRK4 669 aa18.85■□□□□ 0.61
RFTN1-209ENST00000483671 DEFB129Q9H1M3 183 aa18.85■□□□□ 0.61
RFTN1-209ENST00000483671 SRCAPQ6ZRS2 3230 aa18.85■□□□□ 0.61
RFTN1-209ENST00000483671 ASTN2O75129 1339 aaPredicted RBP18.84■□□□□ 0.61
RFTN1-209ENST00000483671 VPS37CA5D8V6 355 aaPredicted RBP18.84■□□□□ 0.61
RFTN1-209ENST00000483671 PRPF3O43395 683 aaKnown RBP18.84■□□□□ 0.61
RFTN1-209ENST00000483671 DEXIO95424 95 aa18.84■□□□□ 0.61
RFTN1-209ENST00000483671 SNHG28P0DPA3 235 aa18.84■□□□□ 0.61
RFTN1-209ENST00000483671 SMARCA1P28370 1054 aa18.84■□□□□ 0.61
RFTN1-209ENST00000483671 GUCY1A2P33402 732 aa18.84■□□□□ 0.61
RFTN1-209ENST00000483671 MCM4P33991 863 aa18.84■□□□□ 0.61
RFTN1-209ENST00000483671 HIRAP54198 1017 aaPredicted RBP18.84■□□□□ 0.61
RFTN1-209ENST00000483671 CDC37L1Q7L3B6 337 aa18.84■□□□□ 0.61
RFTN1-209ENST00000483671 CDAN1Q8IWY9 1227 aa18.84■□□□□ 0.61
RFTN1-209ENST00000483671 FBXO18Q8NFZ0 1043 aa18.84■□□□□ 0.61
RFTN1-209ENST00000483671 PHKBQ93100 1093 aa18.84■□□□□ 0.61
RFTN1-209ENST00000483671 GINM1Q9NU53 330 aa18.84■□□□□ 0.61
RFTN1-209ENST00000483671 RBM27Q9P2N5 1060 aaKnown RBP18.84■□□□□ 0.61
RFTN1-209ENST00000483671 H3BQV1 296 aa18.83■□□□□ 0.61
RFTN1-209ENST00000483671 MPHOSPH10O00566 681 aaKnown RBP18.83■□□□□ 0.61
RFTN1-209ENST00000483671 PLEKHA8P1O95397 391 aa18.83■□□□□ 0.61
RFTN1-209ENST00000483671 RRP1BQ14684 758 aaKnown RBP18.83■□□□□ 0.61
RFTN1-209ENST00000483671 IFFO2Q5TF58 517 aa18.83■□□□□ 0.61
RFTN1-209ENST00000483671 HOOK2Q96ED9 719 aa18.83■□□□□ 0.61
RFTN1-209ENST00000483671 C8orf76Q96K31 380 aa18.83■□□□□ 0.61
RFTN1-209ENST00000483671 SLC26A6Q9BXS9 759 aa18.83■□□□□ 0.61
RFTN1-209ENST00000483671 CABP5Q9NP86 173 aa18.83■□□□□ 0.61
RFTN1-209ENST00000483671 MAD2L2Q9UI95 211 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms