RNA–Protein interactions for RNA: ENST00000483086.1

HDLBP-239, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 620 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-239ENST00000483086 GNRH1P01148 92 aa14.56□□□□□ -0.08
HDLBP-239ENST00000483086 IGHDP01880 384 aa14.56□□□□□ -0.08
HDLBP-239ENST00000483086 ELNP15502 786 aa14.56□□□□□ -0.08
HDLBP-239ENST00000483086 FLT3LGP49771 235 aa14.56□□□□□ -0.08
HDLBP-239ENST00000483086 FCGRTP55899 365 aa14.56□□□□□ -0.08
HDLBP-239ENST00000483086 HERVK_113P62684 666 aa14.56□□□□□ -0.08
HDLBP-239ENST00000483086 HDAC1Q13547 482 aaPredicted RBP14.56□□□□□ -0.08
HDLBP-239ENST00000483086 ATP8A2Q9NTI2 1148 aa14.56□□□□□ -0.08
HDLBP-239ENST00000483086 MORF4L1Q9UBU8 362 aa14.56□□□□□ -0.08
HDLBP-239ENST00000483086 PNMA3Q9UL41 463 aa14.56□□□□□ -0.08
HDLBP-239ENST00000483086 SLC4A4Q9Y6R1 1079 aa14.56□□□□□ -0.08
HDLBP-239ENST00000483086 CEP290O15078 2479 aa14.56□□□□□ -0.08
HDLBP-239ENST00000483086 DNAH12Q6ZR08 3092 aa14.56□□□□□ -0.08
HDLBP-239ENST00000483086 RANBP2P49792 3224 aaKnown RBP14.56□□□□□ -0.08
HDLBP-239ENST00000483086 FOXP2O15409 715 aa14.55□□□□□ -0.08
HDLBP-239ENST00000483086 RNF113AO15541 343 aaKnown RBP14.55□□□□□ -0.08
HDLBP-239ENST00000483086 VCAM1P19320 739 aa14.55□□□□□ -0.08
HDLBP-239ENST00000483086 MX1P20591 662 aa14.55□□□□□ -0.08
HDLBP-239ENST00000483086 CDK8P49336 464 aa14.55□□□□□ -0.08
HDLBP-239ENST00000483086 PRMT2P55345 433 aa14.55□□□□□ -0.08
HDLBP-239ENST00000483086 ARHGEF6Q15052 776 aa14.55□□□□□ -0.08
HDLBP-239ENST00000483086 ANKRD45Q5TZF3 282 aa14.55□□□□□ -0.08
HDLBP-239ENST00000483086 USP17L2Q6R6M4 530 aa14.55□□□□□ -0.08
HDLBP-239ENST00000483086 APPBP2Q92624 585 aa14.55□□□□□ -0.08
HDLBP-239ENST00000483086 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.55□□□□□ -0.08
HDLBP-239ENST00000483086 KIAA1683Q9H0B3 1180 aa14.55□□□□□ -0.08
HDLBP-239ENST00000483086 TMOD4Q9NZQ9 345 aa14.55□□□□□ -0.08
HDLBP-239ENST00000483086 GJD2Q9UKL4 321 aa14.55□□□□□ -0.08
HDLBP-239ENST00000483086 TTC41PQ6P2S7 1318 aa14.55□□□□□ -0.08
HDLBP-239ENST00000483086 ALPK3Q96L96 1907 aa14.54□□□□□ -0.08
HDLBP-239ENST00000483086 GPAA1O43292 621 aa14.54□□□□□ -0.08
HDLBP-239ENST00000483086 GRK4P32298 578 aa14.54□□□□□ -0.08
HDLBP-239ENST00000483086 C16orf86Q6ZW13 317 aa14.54□□□□□ -0.08
HDLBP-239ENST00000483086 RAET1EQ8TD07 263 aa14.54□□□□□ -0.08
HDLBP-239ENST00000483086 PORCNQ9H237 461 aa14.54□□□□□ -0.08
HDLBP-239ENST00000483086 ZNFX1Q9P2E3 1918 aaKnown RBP14.53□□□□□ -0.08
HDLBP-239ENST00000483086 FRMPD3Q5JV73 1810 aa14.53□□□□□ -0.08
HDLBP-239ENST00000483086 MPHOSPH10O00566 681 aaKnown RBP14.53□□□□□ -0.08
HDLBP-239ENST00000483086 TNPO2O14787 897 aaKnown RBP14.53□□□□□ -0.08
HDLBP-239ENST00000483086 GCLCP48506 637 aaPredicted RBP14.53□□□□□ -0.08
HDLBP-239ENST00000483086 IRX3P78415 501 aaPredicted RBP14.53□□□□□ -0.08
HDLBP-239ENST00000483086 TRIM32Q13049 653 aa14.53□□□□□ -0.08
HDLBP-239ENST00000483086 CATSPERGQ6ZRH7 1159 aa14.53□□□□□ -0.08
HDLBP-239ENST00000483086 STK11IPQ8N1F8 1099 aa14.53□□□□□ -0.08
HDLBP-239ENST00000483086 FEZ1Q99689 392 aa14.53□□□□□ -0.08
HDLBP-239ENST00000483086 ADCY3O60266 1144 aa14.52□□□□□ -0.09
HDLBP-239ENST00000483086 GLRX3O76003 335 aaKnown RBP14.52□□□□□ -0.09
HDLBP-239ENST00000483086 HOXD10P28358 340 aa14.52□□□□□ -0.09
HDLBP-239ENST00000483086 PABPC4Q13310 644 aaKnown RBP eCLIP14.52□□□□□ -0.094e-13■■□□□ 14.4
HDLBP-239ENST00000483086 IRF5Q13568 498 aa14.52□□□□□ -0.09
HDLBP-239ENST00000483086 ZSCAN25Q6NSZ9 544 aa14.52□□□□□ -0.09
HDLBP-239ENST00000483086 CCDC129Q6ZRS4 1044 aa14.52□□□□□ -0.09
HDLBP-239ENST00000483086 NBPF11Q86T75 865 aa14.52□□□□□ -0.09
HDLBP-239ENST00000483086 GPATCH3Q96I76 525 aa14.52□□□□□ -0.09
HDLBP-239ENST00000483086 UNC93B1Q9H1C4 597 aa14.52□□□□□ -0.09
HDLBP-239ENST00000483086 CABP5Q9NP86 173 aa14.52□□□□□ -0.09
HDLBP-239ENST00000483086 BTBD7Q9P203 1132 aa14.52□□□□□ -0.09
HDLBP-239ENST00000483086 STAP2Q9UGK3 403 aa14.52□□□□□ -0.09
HDLBP-239ENST00000483086 SUPT16HQ9Y5B9 1047 aaKnown RBP14.52□□□□□ -0.09
HDLBP-239ENST00000483086 TACC3Q9Y6A5 838 aa14.52□□□□□ -0.09
HDLBP-239ENST00000483086 ROBO3Q96MS0 1386 aa14.51□□□□□ -0.09
HDLBP-239ENST00000483086 SPDYE16A6NNV3 312 aaPredicted RBP14.51□□□□□ -0.09
HDLBP-239ENST00000483086 CCL5P13501 91 aa14.51□□□□□ -0.09
HDLBP-239ENST00000483086 PDE1AP54750 535 aa14.51□□□□□ -0.09
HDLBP-239ENST00000483086 ERVK-9P63128 1117 aa14.51□□□□□ -0.09
HDLBP-239ENST00000483086 ERVK-24P63145 666 aa14.51□□□□□ -0.09
HDLBP-239ENST00000483086 SBK1Q52WX2 424 aa14.51□□□□□ -0.09
HDLBP-239ENST00000483086 ZMYM1Q5SVZ6 1142 aa14.51□□□□□ -0.09
HDLBP-239ENST00000483086 TMEM179Q6ZVK1 233 aa14.51□□□□□ -0.09
HDLBP-239ENST00000483086 SMC5Q8IY18 1101 aa14.51□□□□□ -0.09
HDLBP-239ENST00000483086 PAGR1Q9BTK6 254 aa14.51□□□□□ -0.09
HDLBP-239ENST00000483086 LNPKQ9C0E8 428 aa14.51□□□□□ -0.09
HDLBP-239ENST00000483086 RPAP3Q9H6T3 665 aaPredicted RBP14.51□□□□□ -0.09
HDLBP-239ENST00000483086 SWAP70Q9UH65 585 aa14.51□□□□□ -0.09
HDLBP-239ENST00000483086 USP17L15C9J2P7 530 aa14.5□□□□□ -0.09
HDLBP-239ENST00000483086 USP17L13C9JLJ4 530 aa14.5□□□□□ -0.09
HDLBP-239ENST00000483086 USP17L11C9JVI0 530 aa14.5□□□□□ -0.09
HDLBP-239ENST00000483086 USP17L18D6R9N7 530 aa14.5□□□□□ -0.09
HDLBP-239ENST00000483086 USP17L22D6RA61 530 aa14.5□□□□□ -0.09
HDLBP-239ENST00000483086 USP17L17D6RBQ6 530 aa14.5□□□□□ -0.09
HDLBP-239ENST00000483086 USP17L19D6RCP7 530 aa14.5□□□□□ -0.09
HDLBP-239ENST00000483086 USP17L20D6RJB6 530 aa14.5□□□□□ -0.09
HDLBP-239ENST00000483086 INHAP05111 366 aa14.5□□□□□ -0.09
HDLBP-239ENST00000483086 RASA1P20936 1047 aa14.5□□□□□ -0.09
HDLBP-239ENST00000483086 USP17L24Q0WX57 530 aa14.5□□□□□ -0.09
HDLBP-239ENST00000483086 SLAIN1Q8ND83 568 aa14.5□□□□□ -0.09
HDLBP-239ENST00000483086 USP6NLQ92738 828 aa14.5□□□□□ -0.09
HDLBP-239ENST00000483086 GCC1Q96CN9 775 aa14.5□□□□□ -0.09
HDLBP-239ENST00000483086 FSD1Q9BTV5 496 aa14.5□□□□□ -0.09
HDLBP-239ENST00000483086 TMEM106CQ9BVX2 250 aa14.5□□□□□ -0.09
HDLBP-239ENST00000483086 SZT2Q5T011 3432 aa14.5□□□□□ -0.09
HDLBP-239ENST00000483086 ERC2O15083 957 aa14.49□□□□□ -0.09
HDLBP-239ENST00000483086 ZFYP08048 801 aaPredicted RBP14.49□□□□□ -0.09
HDLBP-239ENST00000483086 USP14P54578 494 aa14.49□□□□□ -0.09
HDLBP-239ENST00000483086 ICA1Q05084 483 aa14.49□□□□□ -0.09
HDLBP-239ENST00000483086 VPS53Q5VIR6 699 aa14.49□□□□□ -0.09
HDLBP-239ENST00000483086 B4GALNT3Q6L9W6 998 aa14.49□□□□□ -0.09
HDLBP-239ENST00000483086 UBE2Q1Q7Z7E8 422 aa14.49□□□□□ -0.09
HDLBP-239ENST00000483086 IFNL3Q8IZI9 196 aa14.49□□□□□ -0.09
HDLBP-239ENST00000483086 SPICE1Q8N0Z3 855 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms