RNA–Protein interactions for RNA: ENST00000482933.1

COL21A1-209, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 1,413 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-209ENST00000482933 PNMA3Q9UL41 463 aa15.54■□□□□ 0.08
COL21A1-209ENST00000482933 AGTPBP1Q9UPW5 1226 aa15.54■□□□□ 0.08
COL21A1-209ENST00000482933 NDUFB9Q9Y6M9 179 aa15.54■□□□□ 0.08
COL21A1-209ENST00000482933 CDK5RAP2Q96SN8 1893 aa15.54■□□□□ 0.08
COL21A1-209ENST00000482933 ATAD5Q96QE3 1844 aa15.53■□□□□ 0.08
COL21A1-209ENST00000482933 FMNL1O95466 1100 aaPredicted RBP15.53■□□□□ 0.08
COL21A1-209ENST00000482933 ASNSP08243 561 aa15.53■□□□□ 0.08
COL21A1-209ENST00000482933 BCRP11274 1271 aa15.53■□□□□ 0.08
COL21A1-209ENST00000482933 USP5P45974 858 aa15.53■□□□□ 0.08
COL21A1-209ENST00000482933 SPP2Q13103 211 aa15.53■□□□□ 0.08
COL21A1-209ENST00000482933 CCDC84Q86UT8 332 aaPredicted RBP15.53■□□□□ 0.08
COL21A1-209ENST00000482933 MIGA1Q8NAN2 632 aa15.53■□□□□ 0.08
COL21A1-209ENST00000482933 ZNF333Q96JL9 665 aa15.53■□□□□ 0.08
COL21A1-209ENST00000482933 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.53■□□□□ 0.08
COL21A1-209ENST00000482933 SRRDQ9UH36 339 aa15.53■□□□□ 0.08
COL21A1-209ENST00000482933 PALD1Q9ULE6 856 aa15.53■□□□□ 0.08
COL21A1-209ENST00000482933 EVI5O60447 810 aa15.52■□□□□ 0.08
COL21A1-209ENST00000482933 PSEN2P49810 448 aa15.52■□□□□ 0.08
COL21A1-209ENST00000482933 FCGRTP55899 365 aa15.52■□□□□ 0.08
COL21A1-209ENST00000482933 PABPC4Q13310 644 aaKnown RBP eCLIP15.52■□□□□ 0.08
COL21A1-209ENST00000482933 SMCR8Q8TEV9 937 aaPredicted RBP15.52■□□□□ 0.08
COL21A1-209ENST00000482933 SIPA1L1O43166 1804 aa15.51■□□□□ 0.07
COL21A1-209ENST00000482933 FOSBP53539 338 aa15.51■□□□□ 0.07
COL21A1-209ENST00000482933 RRP1BQ14684 758 aaKnown RBP15.51■□□□□ 0.07
COL21A1-209ENST00000482933 SH3D19Q5HYK7 790 aa15.51■□□□□ 0.07
COL21A1-209ENST00000482933 C20orf194Q5TEA3 1177 aa15.51■□□□□ 0.07
COL21A1-209ENST00000482933 DNAJC2Q99543 621 aaKnown RBP15.51■□□□□ 0.07
COL21A1-209ENST00000482933 SAP30BPQ9UHR5 308 aaKnown RBP15.51■□□□□ 0.07
COL21A1-209ENST00000482933 ZSWIM8A7E2V4 1837 aa15.51■□□□□ 0.07
COL21A1-209ENST00000482933 HTTP42858 3142 aa15.51■□□□□ 0.07
COL21A1-209ENST00000482933 MYPNQ86TC9 1320 aa15.51■□□□□ 0.07
COL21A1-209ENST00000482933 OSBPP22059 807 aa15.51■□□□□ 0.07
COL21A1-209ENST00000482933 CTGFP29279 349 aa15.51■□□□□ 0.07
COL21A1-209ENST00000482933 SLC9C2Q5TAH2 1124 aa15.51■□□□□ 0.07
COL21A1-209ENST00000482933 TTC6Q86TZ1 520 aa15.51■□□□□ 0.07
COL21A1-209ENST00000482933 RAET1EQ8TD07 263 aa15.51■□□□□ 0.07
COL21A1-209ENST00000482933 TRIM47Q96LD4 638 aa15.51■□□□□ 0.07
COL21A1-209ENST00000482933 WDR18Q9BV38 432 aa15.51■□□□□ 0.07
COL21A1-209ENST00000482933 BCL11AQ9H165 835 aa15.51■□□□□ 0.07
COL21A1-209ENST00000482933 DNAJC18Q9H819 358 aa15.51■□□□□ 0.07
COL21A1-209ENST00000482933 RBBP6Q7Z6E9 1792 aaKnown RBP15.5■□□□□ 0.07
COL21A1-209ENST00000482933 MYH1P12882 1939 aa15.5■□□□□ 0.07
COL21A1-209ENST00000482933 MAGEB6P1A0A0J9YX57 407 aa15.5■□□□□ 0.07
COL21A1-209ENST00000482933 GOLIM4O00461 696 aa15.5■□□□□ 0.07
COL21A1-209ENST00000482933 HMGCS2P54868 508 aa15.5■□□□□ 0.07
COL21A1-209ENST00000482933 SLC4A8Q2Y0W8 1093 aa15.5■□□□□ 0.07
COL21A1-209ENST00000482933 TREML2Q5T2D2 321 aa15.5■□□□□ 0.07
COL21A1-209ENST00000482933 DMRTA1Q5VZB9 504 aa15.5■□□□□ 0.07
COL21A1-209ENST00000482933 KCNK17Q96T54 332 aa15.5■□□□□ 0.07
COL21A1-209ENST00000482933 RIOK1Q9BRS2 568 aaKnown RBP15.5■□□□□ 0.07
COL21A1-209ENST00000482933 LRRCC1Q9C099 1032 aa15.5■□□□□ 0.07
COL21A1-209ENST00000482933 C19orf81C9J6K1 198 aa15.49■□□□□ 0.07
COL21A1-209ENST00000482933 PDE6AP16499 860 aa15.49■□□□□ 0.07
COL21A1-209ENST00000482933 ATP5JP18859 108 aa15.49■□□□□ 0.07
COL21A1-209ENST00000482933 BACE1P56817 501 aa15.49■□□□□ 0.07
COL21A1-209ENST00000482933 SH3TC2Q8TF17 1288 aa15.49■□□□□ 0.07
COL21A1-209ENST00000482933 EHD4Q9H223 541 aa15.49■□□□□ 0.07
COL21A1-209ENST00000482933 BOLA2Q9H3K6 86 aa15.49■□□□□ 0.07
COL21A1-209ENST00000482933 TMOD4Q9NZQ9 345 aa15.49■□□□□ 0.07
COL21A1-209ENST00000482933 SERPINB13Q9UIV8 391 aa15.49■□□□□ 0.07
COL21A1-209ENST00000482933 CENPFP49454 3210 aa15.48■□□□□ 0.07
COL21A1-209ENST00000482933 LOC285556D6RIA3 1793 aa15.48■□□□□ 0.07
COL21A1-209ENST00000482933 USP17L10C9JJH3 530 aa15.48■□□□□ 0.07
COL21A1-209ENST00000482933 GDF11O95390 407 aa15.48■□□□□ 0.07
COL21A1-209ENST00000482933 GCLCP48506 637 aaPredicted RBP15.48■□□□□ 0.07
COL21A1-209ENST00000482933 FAM110CQ1W6H9 321 aa15.48■□□□□ 0.07
COL21A1-209ENST00000482933 TATDN1Q6P1N9 297 aa15.48■□□□□ 0.07
COL21A1-209ENST00000482933 ANKRD13CQ8N6S4 541 aa15.48■□□□□ 0.07
COL21A1-209ENST00000482933 CRNKL1Q9BZJ0 848 aaKnown RBP15.48■□□□□ 0.07
COL21A1-209ENST00000482933 PAG1Q9NWQ8 432 aa15.48■□□□□ 0.07
COL21A1-209ENST00000482933 ZBTB21Q9ULJ3 1066 aa15.48■□□□□ 0.07
COL21A1-209ENST00000482933 MGAMO43451 1857 aa15.48■□□□□ 0.07
COL21A1-209ENST00000482933 TNRC18O15417 2968 aaPredicted RBP15.47■□□□□ 0.07
COL21A1-209ENST00000482933 ZNF532Q9HCE3 1301 aa15.47■□□□□ 0.07
COL21A1-209ENST00000482933 POLR3DP05423 398 aaPredicted RBP15.47■□□□□ 0.07
COL21A1-209ENST00000482933 EN2P19622 333 aaPredicted RBP15.47■□□□□ 0.07
COL21A1-209ENST00000482933 GRK4P32298 578 aa15.47■□□□□ 0.07
COL21A1-209ENST00000482933 PRKCZQ05513 592 aa15.47■□□□□ 0.07
COL21A1-209ENST00000482933 MTMR2Q13614 643 aa15.47■□□□□ 0.07
COL21A1-209ENST00000482933 HAUS7Q99871 368 aa15.47■□□□□ 0.07
COL21A1-209ENST00000482933 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.47■□□□□ 0.07
COL21A1-209ENST00000482933 TNPO2O14787 897 aaKnown RBP15.46■□□□□ 0.07
COL21A1-209ENST00000482933 UBXN2AP68543 259 aa15.46■□□□□ 0.07
COL21A1-209ENST00000482933 PRPF38BQ5VTL8 546 aaKnown RBP15.46■□□□□ 0.07
COL21A1-209ENST00000482933 ASCC2Q9H1I8 757 aaPredicted RBP15.46■□□□□ 0.07
COL21A1-209ENST00000482933 EMILIN3Q9NT22 766 aa15.46■□□□□ 0.07
COL21A1-209ENST00000482933 TCRBV5S4A2TA0A5A2 114 aa15.45■□□□□ 0.06
COL21A1-209ENST00000482933 HRO43593 1189 aa15.45■□□□□ 0.06
COL21A1-209ENST00000482933 MYCP01106 439 aaPredicted RBP15.45■□□□□ 0.06
COL21A1-209ENST00000482933 HOXA7P31268 230 aaPredicted RBP15.45■□□□□ 0.06
COL21A1-209ENST00000482933 IRX3P78415 501 aaPredicted RBP15.45■□□□□ 0.06
COL21A1-209ENST00000482933 JAG1P78504 1218 aa15.45■□□□□ 0.06
COL21A1-209ENST00000482933 CERKLQ49MI3 558 aaPredicted RBP15.45■□□□□ 0.06
COL21A1-209ENST00000482933 COA7Q96BR5 231 aa15.45■□□□□ 0.06
COL21A1-209ENST00000482933 EDC3Q96F86 508 aaKnown RBP15.45■□□□□ 0.06
COL21A1-209ENST00000482933 CABP5Q9NP86 173 aa15.45■□□□□ 0.06
COL21A1-209ENST00000482933 RTN4Q9NQC3 1192 aaKnown RBP15.45■□□□□ 0.06
COL21A1-209ENST00000482933 KIAA0100Q14667 2235 aaKnown RBP15.45■□□□□ 0.06
COL21A1-209ENST00000482933 GH2P01242 217 aa15.44■□□□□ 0.06
COL21A1-209ENST00000482933 PTPREP23469 700 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms