RNA–Protein interactions for RNA: ENST00000482904.1

RHBDF1-208, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-208ENST00000482904 TMEM179Q6ZVK1 233 aa28.21■■■□□ 2.11
RHBDF1-208ENST00000482904 ACER1Q8TDN7 264 aa28.21■■■□□ 2.11
RHBDF1-208ENST00000482904 COA7Q96BR5 231 aa28.21■■■□□ 2.11
RHBDF1-208ENST00000482904 SALL3Q9BXA9 1300 aa28.2■■■□□ 2.11
RHBDF1-208ENST00000482904 POTEFA5A3E0 1075 aa28.2■■■□□ 2.1
RHBDF1-208ENST00000482904 HERVK_113P62684 666 aa28.2■■■□□ 2.1
RHBDF1-208ENST00000482904 CTR9Q6PD62 1173 aa28.2■■■□□ 2.1
RHBDF1-208ENST00000482904 C12orf42Q96LP6 360 aa28.2■■■□□ 2.1
RHBDF1-208ENST00000482904 P2RX7Q99572 595 aaKnown RBP28.2■■■□□ 2.1
RHBDF1-208ENST00000482904 SUPT16HQ9Y5B9 1047 aaKnown RBP28.2■■■□□ 2.1
RHBDF1-208ENST00000482904 BAZ2AQ9UIF9 1905 aaKnown RBP28.2■■■□□ 2.1
RHBDF1-208ENST00000482904 M0R2C6 588 aa28.19■■■□□ 2.1
RHBDF1-208ENST00000482904 GNAT2P19087 354 aa28.19■■■□□ 2.1
RHBDF1-208ENST00000482904 GRK4P32298 578 aa28.19■■■□□ 2.1
RHBDF1-208ENST00000482904 GUCY1A2P33402 732 aa28.19■■■□□ 2.1
RHBDF1-208ENST00000482904 TDO2P48775 406 aa28.19■■■□□ 2.1
RHBDF1-208ENST00000482904 CDK8P49336 464 aa28.19■■■□□ 2.1
RHBDF1-208ENST00000482904 C16orf86Q6ZW13 317 aa28.19■■■□□ 2.1
RHBDF1-208ENST00000482904 BIN2Q9UBW5 565 aaPredicted RBP28.19■■■□□ 2.1
RHBDF1-208ENST00000482904 APPP05067 770 aa28.18■■■□□ 2.1
RHBDF1-208ENST00000482904 AKR1B1P15121 316 aa28.18■■■□□ 2.1
RHBDF1-208ENST00000482904 VCAM1P19320 739 aa28.18■■■□□ 2.1
RHBDF1-208ENST00000482904 GTF3C2Q8WUA4 911 aaPredicted RBP28.18■■■□□ 2.1
RHBDF1-208ENST00000482904 LNPKQ9C0E8 428 aa28.18■■■□□ 2.1
RHBDF1-208ENST00000482904 GABRQQ9UN88 632 aa28.18■■■□□ 2.1
RHBDF1-208ENST00000482904 MGAMO43451 1857 aa28.17■■■□□ 2.1
RHBDF1-208ENST00000482904 USP17L15C9J2P7 530 aa28.17■■■□□ 2.1
RHBDF1-208ENST00000482904 USP17L13C9JLJ4 530 aa28.17■■■□□ 2.1
RHBDF1-208ENST00000482904 USP17L11C9JVI0 530 aa28.17■■■□□ 2.1
RHBDF1-208ENST00000482904 USP17L18D6R9N7 530 aa28.17■■■□□ 2.1
RHBDF1-208ENST00000482904 USP17L22D6RA61 530 aa28.17■■■□□ 2.1
RHBDF1-208ENST00000482904 USP17L17D6RBQ6 530 aa28.17■■■□□ 2.1
RHBDF1-208ENST00000482904 USP17L19D6RCP7 530 aa28.17■■■□□ 2.1
RHBDF1-208ENST00000482904 USP17L20D6RJB6 530 aa28.17■■■□□ 2.1
RHBDF1-208ENST00000482904 SMIM22K7EJ46 135 aa28.17■■■□□ 2.1
RHBDF1-208ENST00000482904 FLT3LGP49771 235 aa28.17■■■□□ 2.1
RHBDF1-208ENST00000482904 ICA1Q05084 483 aa28.17■■■□□ 2.1
RHBDF1-208ENST00000482904 USP17L24Q0WX57 530 aa28.17■■■□□ 2.1
RHBDF1-208ENST00000482904 B4GALNT3Q6L9W6 998 aa28.17■■■□□ 2.1
RHBDF1-208ENST00000482904 GIMAP6Q6P9H5 292 aa28.17■■■□□ 2.1
RHBDF1-208ENST00000482904 SLAIN1Q8ND83 568 aa28.17■■■□□ 2.1
RHBDF1-208ENST00000482904 CCDC17Q96LX7 622 aa28.17■■■□□ 2.1
RHBDF1-208ENST00000482904 PAGR1Q9BTK6 254 aa28.17■■■□□ 2.1
RHBDF1-208ENST00000482904 MORF4L1Q9UBU8 362 aa28.17■■■□□ 2.1
RHBDF1-208ENST00000482904 GSG1L2A8MUP6 293 aa28.16■■■□□ 2.1
RHBDF1-208ENST00000482904 PDE1AP54750 535 aa28.16■■■□□ 2.1
RHBDF1-208ENST00000482904 ARHGEF10LQ9HCE6 1279 aa28.16■■■□□ 2.1
RHBDF1-208ENST00000482904 MINDY4BA8MYZ0 360 aa28.15■■■□□ 2.1
RHBDF1-208ENST00000482904 CLEC10AQ8IUN9 316 aa28.15■■■□□ 2.1
RHBDF1-208ENST00000482904 CCAR1Q8IX12 1150 aaKnown RBP28.15■■■□□ 2.1
RHBDF1-208ENST00000482904 GPRC5AQ8NFJ5 357 aa28.15■■■□□ 2.1
RHBDF1-208ENST00000482904 NACAP1Q9BZK3 213 aa28.15■■■□□ 2.1
RHBDF1-208ENST00000482904 SH2D4AQ9H788 454 aa28.15■■■□□ 2.1
RHBDF1-208ENST00000482904 EPB41L4AQ9HCS5 686 aaPredicted RBP28.15■■■□□ 2.1
RHBDF1-208ENST00000482904 STAP2Q9UGK3 403 aa28.15■■■□□ 2.1
RHBDF1-208ENST00000482904 MYH8P13535 1937 aa28.15■■■□□ 2.1
RHBDF1-208ENST00000482904 ADCY3O60266 1144 aa28.14■■■□□ 2.1
RHBDF1-208ENST00000482904 UBXN2AP68543 259 aa28.14■■■□□ 2.1
RHBDF1-208ENST00000482904 SBK1Q52WX2 424 aa28.14■■■□□ 2.1
RHBDF1-208ENST00000482904 SMC5Q8IY18 1101 aa28.14■■■□□ 2.1
RHBDF1-208ENST00000482904 STK11IPQ8N1F8 1099 aa28.14■■■□□ 2.1
RHBDF1-208ENST00000482904 EVI5LQ96CN4 794 aa28.14■■■□□ 2.1
RHBDF1-208ENST00000482904 SEC62Q99442 399 aaKnown RBP28.14■■■□□ 2.1
RHBDF1-208ENST00000482904 RPAP3Q9H6T3 665 aaPredicted RBP28.14■■■□□ 2.1
RHBDF1-208ENST00000482904 RBBP6Q7Z6E9 1792 aaKnown RBP28.14■■■□□ 2.09
RHBDF1-208ENST00000482904 ZMYM1Q5SVZ6 1142 aa28.13■■■□□ 2.09
RHBDF1-208ENST00000482904 TXNRD2Q9NNW7 524 aa28.13■■■□□ 2.09
RHBDF1-208ENST00000482904 ROBO3Q96MS0 1386 aa28.12■■■□□ 2.09
RHBDF1-208ENST00000482904 A0A1W2PRG0 241 aa28.12■■■□□ 2.09
RHBDF1-208ENST00000482904 PEX10O60683 326 aa28.12■■■□□ 2.09
RHBDF1-208ENST00000482904 EN2P19622 333 aaPredicted RBP28.12■■■□□ 2.09
RHBDF1-208ENST00000482904 ATP2B2Q01814 1243 aa28.12■■■□□ 2.09
RHBDF1-208ENST00000482904 CATSPERGQ6ZRH7 1159 aa28.12■■■□□ 2.09
RHBDF1-208ENST00000482904 TANGO6Q9C0B7 1094 aa28.12■■■□□ 2.09
RHBDF1-208ENST00000482904 MKNK2Q9HBH9 465 aa28.12■■■□□ 2.09
RHBDF1-208ENST00000482904 CWC22Q9HCG8 908 aaKnown RBP28.12■■■□□ 2.09
RHBDF1-208ENST00000482904 ELNP15502 786 aa28.11■■■□□ 2.09
RHBDF1-208ENST00000482904 ERVK-9P63128 1117 aa28.11■■■□□ 2.09
RHBDF1-208ENST00000482904 ERVK-24P63145 666 aa28.11■■■□□ 2.09
RHBDF1-208ENST00000482904 IRF5Q13568 498 aa28.11■■■□□ 2.09
RHBDF1-208ENST00000482904 RBPJLQ9UBG7 517 aa28.11■■■□□ 2.09
RHBDF1-208ENST00000482904 IGHDP01880 384 aa28.1■■■□□ 2.09
RHBDF1-208ENST00000482904 MTFR1Q15390 333 aa28.1■■■□□ 2.09
RHBDF1-208ENST00000482904 CHD1LQ86WJ1 897 aa28.1■■■□□ 2.09
RHBDF1-208ENST00000482904 PATL2C9JE40 543 aaKnown RBP28.09■■■□□ 2.09
RHBDF1-208ENST00000482904 MAPK4P31152 587 aa28.09■■■□□ 2.09
RHBDF1-208ENST00000482904 IFNL3Q8IZI9 196 aa28.09■■■□□ 2.09
RHBDF1-208ENST00000482904 PXYLP1Q8TE99 480 aa28.09■■■□□ 2.09
RHBDF1-208ENST00000482904 LPAR1Q92633 364 aa28.09■■■□□ 2.09
RHBDF1-208ENST00000482904 NAPBQ9H115 298 aa28.09■■■□□ 2.09
RHBDF1-208ENST00000482904 KANSL2Q9H9L4 492 aa28.09■■■□□ 2.09
RHBDF1-208ENST00000482904 ZNF287Q9HBT7 754 aa28.09■■■□□ 2.09
RHBDF1-208ENST00000482904 TRIM6-TRIM34B2RNG4 842 aa28.08■■■□□ 2.09
RHBDF1-208ENST00000482904 INHAP05111 366 aa28.08■■■□□ 2.09
RHBDF1-208ENST00000482904 CCL5P13501 91 aa28.08■■■□□ 2.09
RHBDF1-208ENST00000482904 TMX2Q9Y320 296 aa28.08■■■□□ 2.09
RHBDF1-208ENST00000482904 RABGAP1Q9Y3P9 1069 aa28.08■■■□□ 2.09
RHBDF1-208ENST00000482904 CCNA1P78396 465 aa28.07■■■□□ 2.08
RHBDF1-208ENST00000482904 IRX6P78412 446 aaPredicted RBP28.07■■■□□ 2.08
RHBDF1-208ENST00000482904 NUCB1Q02818 461 aa28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms