RNA–Protein interactions for RNA: ENST00000482614.5

EXOSC3-205, Transcript of exosome component 3, humanhuman

TSL 5

Gene EXOSC3, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-205ENST00000482614 STRBPQ96SI9 672 aaKnown RBP18.44■□□□□ 0.54
EXOSC3-205ENST00000482614 USP17L15C9J2P7 530 aa18.43■□□□□ 0.54
EXOSC3-205ENST00000482614 USP17L13C9JLJ4 530 aa18.43■□□□□ 0.54
EXOSC3-205ENST00000482614 USP17L11C9JVI0 530 aa18.43■□□□□ 0.54
EXOSC3-205ENST00000482614 USP17L18D6R9N7 530 aa18.43■□□□□ 0.54
EXOSC3-205ENST00000482614 USP17L22D6RA61 530 aa18.43■□□□□ 0.54
EXOSC3-205ENST00000482614 USP17L17D6RBQ6 530 aa18.43■□□□□ 0.54
EXOSC3-205ENST00000482614 USP17L19D6RCP7 530 aa18.43■□□□□ 0.54
EXOSC3-205ENST00000482614 USP17L20D6RJB6 530 aa18.43■□□□□ 0.54
EXOSC3-205ENST00000482614 MX1P20591 662 aa18.43■□□□□ 0.54
EXOSC3-205ENST00000482614 GUCY1A2P33402 732 aa18.43■□□□□ 0.54
EXOSC3-205ENST00000482614 FLT3LGP49771 235 aa18.43■□□□□ 0.54
EXOSC3-205ENST00000482614 USP17L24Q0WX57 530 aa18.43■□□□□ 0.54
EXOSC3-205ENST00000482614 ZYXQ15942 572 aaKnown RBP18.43■□□□□ 0.54
EXOSC3-205ENST00000482614 TMEM179Q6ZVK1 233 aa18.43■□□□□ 0.54
EXOSC3-205ENST00000482614 SLC44A5Q8NCS7 719 aa18.43■□□□□ 0.54
EXOSC3-205ENST00000482614 SLAIN1Q8ND83 568 aa18.43■□□□□ 0.54
EXOSC3-205ENST00000482614 ACER1Q8TDN7 264 aa18.43■□□□□ 0.54
EXOSC3-205ENST00000482614 OTUD7AQ8TE49 926 aaPredicted RBP18.43■□□□□ 0.54
EXOSC3-205ENST00000482614 OSBP2Q969R2 916 aa18.43■□□□□ 0.54
EXOSC3-205ENST00000482614 CCDC17Q96LX7 622 aa18.43■□□□□ 0.54
EXOSC3-205ENST00000482614 EN2P19622 333 aaPredicted RBP18.42■□□□□ 0.54
EXOSC3-205ENST00000482614 CDK8P49336 464 aa18.42■□□□□ 0.54
EXOSC3-205ENST00000482614 UBXN2AP68543 259 aa18.42■□□□□ 0.54
EXOSC3-205ENST00000482614 IRF5Q13568 498 aa18.42■□□□□ 0.54
EXOSC3-205ENST00000482614 GIMAP6Q6P9H5 292 aa18.42■□□□□ 0.54
EXOSC3-205ENST00000482614 CTR9Q6PD62 1173 aa18.42■□□□□ 0.54
EXOSC3-205ENST00000482614 C16orf86Q6ZW13 317 aa18.42■□□□□ 0.54
EXOSC3-205ENST00000482614 ARPP21Q9UBL0 812 aaPredicted RBP18.42■□□□□ 0.54
EXOSC3-205ENST00000482614 BIN2Q9UBW5 565 aaPredicted RBP18.42■□□□□ 0.54
EXOSC3-205ENST00000482614 KIAA0100Q14667 2235 aaKnown RBP18.42■□□□□ 0.54
EXOSC3-205ENST00000482614 DOCK3Q8IZD9 2030 aa18.42■□□□□ 0.54
EXOSC3-205ENST00000482614 CYP2D7A0A087X1C5 515 aa18.41■□□□□ 0.54
EXOSC3-205ENST00000482614 ADCY3O60266 1144 aa18.41■□□□□ 0.54
EXOSC3-205ENST00000482614 MYCP01106 439 aaPredicted RBP18.41■□□□□ 0.54
EXOSC3-205ENST00000482614 GPRC5AQ8NFJ5 357 aa18.41■□□□□ 0.54
EXOSC3-205ENST00000482614 PXYLP1Q8TE99 480 aa18.41■□□□□ 0.54
EXOSC3-205ENST00000482614 SALL3Q9BXA9 1300 aa18.41■□□□□ 0.54
EXOSC3-205ENST00000482614 GSG1L2A8MUP6 293 aa18.4■□□□□ 0.54
EXOSC3-205ENST00000482614 GPAA1O43292 621 aa18.4■□□□□ 0.54
EXOSC3-205ENST00000482614 GNAT2P19087 354 aa18.4■□□□□ 0.54
EXOSC3-205ENST00000482614 SBK1Q52WX2 424 aa18.4■□□□□ 0.54
EXOSC3-205ENST00000482614 CATSPERGQ6ZRH7 1159 aa18.4■□□□□ 0.54
EXOSC3-205ENST00000482614 FSD1Q9BTV5 496 aa18.4■□□□□ 0.54
EXOSC3-205ENST00000482614 RBPJLQ9UBG7 517 aa18.4■□□□□ 0.54
EXOSC3-205ENST00000482614 CENPFP49454 3210 aa18.4■□□□□ 0.54
EXOSC3-205ENST00000482614 AKR1B1P15121 316 aa18.39■□□□□ 0.53
EXOSC3-205ENST00000482614 VCAM1P19320 739 aa18.39■□□□□ 0.53
EXOSC3-205ENST00000482614 MTFR1Q15390 333 aa18.39■□□□□ 0.53
EXOSC3-205ENST00000482614 RWDD1Q9H446 243 aaPredicted RBP18.39■□□□□ 0.53
EXOSC3-205ENST00000482614 ARHGEF10LQ9HCE6 1279 aa18.39■□□□□ 0.53
EXOSC3-205ENST00000482614 TXNRD2Q9NNW7 524 aa18.39■□□□□ 0.53
EXOSC3-205ENST00000482614 STAP2Q9UGK3 403 aa18.39■□□□□ 0.53
EXOSC3-205ENST00000482614 A0A1W2PRG0 241 aa18.38■□□□□ 0.53
EXOSC3-205ENST00000482614 SMIM22K7EJ46 135 aa18.38■□□□□ 0.53
EXOSC3-205ENST00000482614 M0R2C6 588 aa18.38■□□□□ 0.53
EXOSC3-205ENST00000482614 ERVK-9P63128 1117 aa18.38■□□□□ 0.53
EXOSC3-205ENST00000482614 ERVK-24P63145 666 aa18.38■□□□□ 0.53
EXOSC3-205ENST00000482614 PAGR1Q9BTK6 254 aa18.38■□□□□ 0.53
EXOSC3-205ENST00000482614 RPAP3Q9H6T3 665 aaPredicted RBP18.38■□□□□ 0.53
EXOSC3-205ENST00000482614 SH2D4AQ9H788 454 aa18.38■□□□□ 0.53
EXOSC3-205ENST00000482614 GJD2Q9UKL4 321 aa18.38■□□□□ 0.53
EXOSC3-205ENST00000482614 RABGAP1Q9Y3P9 1069 aa18.38■□□□□ 0.53
EXOSC3-205ENST00000482614 PATL2C9JE40 543 aaKnown RBP18.37■□□□□ 0.53
EXOSC3-205ENST00000482614 CCL5P13501 91 aa18.37■□□□□ 0.53
EXOSC3-205ENST00000482614 ELNP15502 786 aa18.37■□□□□ 0.53
EXOSC3-205ENST00000482614 MAPK4P31152 587 aa18.37■□□□□ 0.53
EXOSC3-205ENST00000482614 PDE1AP54750 535 aa18.37■□□□□ 0.53
EXOSC3-205ENST00000482614 ICA1Q05084 483 aa18.37■□□□□ 0.53
EXOSC3-205ENST00000482614 Q3C1V9 767 aa18.37■□□□□ 0.53
EXOSC3-205ENST00000482614 ZMYM1Q5SVZ6 1142 aa18.37■□□□□ 0.53
EXOSC3-205ENST00000482614 CCAR1Q8IX12 1150 aaKnown RBP18.37■□□□□ 0.53
EXOSC3-205ENST00000482614 EXOC6Q8TAG9 804 aa18.37■□□□□ 0.53
EXOSC3-205ENST00000482614 NKX2-3Q8TAU0 364 aa18.37■□□□□ 0.53
EXOSC3-205ENST00000482614 MINDY4BA8MYZ0 360 aa18.36■□□□□ 0.53
EXOSC3-205ENST00000482614 TNRC18O15417 2968 aaPredicted RBP18.36■□□□□ 0.53
EXOSC3-205ENST00000482614 PEX10O60683 326 aa18.36■□□□□ 0.53
EXOSC3-205ENST00000482614 APPP05067 770 aa18.36■□□□□ 0.53
EXOSC3-205ENST00000482614 GJB1P08034 283 aa18.36■□□□□ 0.53
EXOSC3-205ENST00000482614 TDO2P48775 406 aa18.36■□□□□ 0.53
EXOSC3-205ENST00000482614 LBX2Q6XYB7 198 aa18.36■□□□□ 0.53
EXOSC3-205ENST00000482614 SMC5Q8IY18 1101 aa18.36■□□□□ 0.53
EXOSC3-205ENST00000482614 EVI5LQ96CN4 794 aa18.36■□□□□ 0.53
EXOSC3-205ENST00000482614 RNF208Q9H0X6 261 aa18.36■□□□□ 0.53
EXOSC3-205ENST00000482614 KANSL2Q9H9L4 492 aa18.36■□□□□ 0.53
EXOSC3-205ENST00000482614 TMX2Q9Y320 296 aa18.36■□□□□ 0.53
EXOSC3-205ENST00000482614 INHAP05111 366 aa18.35■□□□□ 0.53
EXOSC3-205ENST00000482614 CCNA1P78396 465 aa18.35■□□□□ 0.53
EXOSC3-205ENST00000482614 POTEEQ6S8J3 1075 aa18.35■□□□□ 0.53
EXOSC3-205ENST00000482614 SIAH1Q8IUQ4 282 aa18.35■□□□□ 0.53
EXOSC3-205ENST00000482614 IFNL3Q8IZI9 196 aa18.35■□□□□ 0.53
EXOSC3-205ENST00000482614 LPAR1Q92633 364 aa18.35■□□□□ 0.53
EXOSC3-205ENST00000482614 SEC62Q99442 399 aaKnown RBP18.35■□□□□ 0.53
EXOSC3-205ENST00000482614 NUDT12Q9BQG2 462 aa18.35■□□□□ 0.53
EXOSC3-205ENST00000482614 NACAP1Q9BZK3 213 aa18.35■□□□□ 0.53
EXOSC3-205ENST00000482614 MKNK2Q9HBH9 465 aa18.35■□□□□ 0.53
EXOSC3-205ENST00000482614 EPB41L4AQ9HCS5 686 aaPredicted RBP18.35■□□□□ 0.53
EXOSC3-205ENST00000482614 HOXC10Q9NYD6 342 aa18.35■□□□□ 0.53
EXOSC3-205ENST00000482614 ROBO3Q96MS0 1386 aa18.34■□□□□ 0.53
EXOSC3-205ENST00000482614 CNMDO75829 334 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms