RNA–Protein interactions for RNA: ENST00000482563.1

RBM39-233, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 1,737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-233ENST00000482563 PARD3BQ8TEW8 1205 aa9.05□□□□□ -0.96
RBM39-233ENST00000482563 BHLHE41Q9C0J9 482 aaPredicted RBP9.05□□□□□ -0.96
RBM39-233ENST00000482563 CYP8B1Q9UNU6 501 aa9.05□□□□□ -0.96
RBM39-233ENST00000482563 TRAV20A0A0B4J274 112 aa9.04□□□□□ -0.96
RBM39-233ENST00000482563 PRSS47A8MTI9 375 aa9.04□□□□□ -0.96
RBM39-233ENST00000482563 PHF20L1A8MW92 1017 aa9.04□□□□□ -0.96
RBM39-233ENST00000482563 PMM2O15305 246 aa9.04□□□□□ -0.96
RBM39-233ENST00000482563 DNAJA2O60884 412 aa9.04□□□□□ -0.96
RBM39-233ENST00000482563 PRKD3O94806 890 aa9.04□□□□□ -0.96
RBM39-233ENST00000482563 C6orf222P0C671 652 aaPredicted RBP9.04□□□□□ -0.96
RBM39-233ENST00000482563 PF4V1P10720 104 aa9.04□□□□□ -0.96
RBM39-233ENST00000482563 LPOP22079 712 aaPredicted RBP9.04□□□□□ -0.96
RBM39-233ENST00000482563 GRB10Q13322 594 aa9.04□□□□□ -0.96
RBM39-233ENST00000482563 XRRA1Q6P2D8 792 aa9.04□□□□□ -0.96
RBM39-233ENST00000482563 MPRIPQ6WCQ1 1025 aa9.04□□□□□ -0.96
RBM39-233ENST00000482563 BRAPQ7Z569 592 aa9.04□□□□□ -0.96
RBM39-233ENST00000482563 SCUBE1Q8IWY4 988 aa9.04□□□□□ -0.96
RBM39-233ENST00000482563 TTC1Q99614 292 aa9.04□□□□□ -0.96
RBM39-233ENST00000482563 PHAXQ9H814 394 aaKnown RBP9.04□□□□□ -0.96
RBM39-233ENST00000482563 DDX21Q9NR30 783 aaKnown RBP eCLIP9.04□□□□□ -0.96
RBM39-233ENST00000482563 ZFATQ9P243 1243 aa9.04□□□□□ -0.96
RBM39-233ENST00000482563 TPX2Q9ULW0 747 aaKnown RBP9.04□□□□□ -0.96
RBM39-233ENST00000482563 SLC12A7Q9Y666 1083 aa9.04□□□□□ -0.96
RBM39-233ENST00000482563 MORC2Q9Y6X9 1032 aaPredicted RBP9.04□□□□□ -0.96
RBM39-233ENST00000482563 TARSP26639 723 aaKnown RBP9.03□□□□□ -0.96
RBM39-233ENST00000482563 GTF2E1P29083 439 aaPredicted RBP9.03□□□□□ -0.96
RBM39-233ENST00000482563 CHAF1AQ13111 956 aaPredicted RBP9.03□□□□□ -0.96
RBM39-233ENST00000482563 SKOR2Q2VWA4 1001 aaPredicted RBP9.03□□□□□ -0.96
RBM39-233ENST00000482563 INAVAQ3KP66 663 aa9.03□□□□□ -0.96
RBM39-233ENST00000482563 LVRNQ6Q4G3 990 aa9.03□□□□□ -0.96
RBM39-233ENST00000482563 SLC9A7Q96T83 725 aa9.03□□□□□ -0.96
RBM39-233ENST00000482563 SLC12A5Q9H2X9 1139 aa9.03□□□□□ -0.96
RBM39-233ENST00000482563 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.03□□□□□ -0.96
RBM39-233ENST00000482563 SAGE1Q9NXZ1 904 aa9.03□□□□□ -0.96
RBM39-233ENST00000482563 DACH1Q9UI36 760 aa9.03□□□□□ -0.96
RBM39-233ENST00000482563 PRR36Q9H6K5 1346 aa9.03□□□□□ -0.96
RBM39-233ENST00000482563 FAM86C2PA6NEL3 165 aa9.02□□□□□ -0.96
RBM39-233ENST00000482563 HTR3BO95264 441 aa9.02□□□□□ -0.96
RBM39-233ENST00000482563 COPB2P35606 906 aa9.02□□□□□ -0.96
RBM39-233ENST00000482563 IARSP41252 1262 aaKnown RBP9.02□□□□□ -0.96
RBM39-233ENST00000482563 GEMIN4P57678 1058 aaKnown RBP9.02□□□□□ -0.96
RBM39-233ENST00000482563 LRRFIP1Q32MZ4 808 aaKnown RBP9.02□□□□□ -0.96
RBM39-233ENST00000482563 OVOS1Q6IE37 1185 aa9.02□□□□□ -0.96
RBM39-233ENST00000482563 CLIP3Q96DZ5 547 aa9.02□□□□□ -0.96
RBM39-233ENST00000482563 SELENOOQ9BVL4 669 aa9.02□□□□□ -0.96
RBM39-233ENST00000482563 SLC52A2Q9HAB3 445 aa9.02□□□□□ -0.96
RBM39-233ENST00000482563 C11orf16Q9NQ32 467 aa9.02□□□□□ -0.96
RBM39-233ENST00000482563 M0R2C6 588 aa9.02□□□□□ -0.97
RBM39-233ENST00000482563 CAPNS1P04632 268 aa9.02□□□□□ -0.97
RBM39-233ENST00000482563 GRIA2P42262 883 aa9.02□□□□□ -0.97
RBM39-233ENST00000482563 PPP2R2AP63151 447 aa9.02□□□□□ -0.97
RBM39-233ENST00000482563 STK3Q13188 491 aa9.02□□□□□ -0.97
RBM39-233ENST00000482563 KRT25Q7Z3Z0 450 aa9.02□□□□□ -0.97
RBM39-233ENST00000482563 CPA6Q8N4T0 437 aa9.02□□□□□ -0.97
RBM39-233ENST00000482563 CEP120Q8N960 986 aa9.02□□□□□ -0.97
RBM39-233ENST00000482563 PI4K2BQ8TCG2 481 aa9.02□□□□□ -0.97
RBM39-233ENST00000482563 NXPE3Q969Y0 559 aa9.02□□□□□ -0.97
RBM39-233ENST00000482563 ATG4CQ96DT6 458 aa9.02□□□□□ -0.97
RBM39-233ENST00000482563 SCLYQ96I15 445 aa9.02□□□□□ -0.97
RBM39-233ENST00000482563 FUBP3Q96I24 572 aaKnown RBP eCLIP9.02□□□□□ -0.976e-6■■□□□ 13.2
RBM39-233ENST00000482563 ZCCHC2Q9C0B9 1178 aaKnown RBP9.02□□□□□ -0.97
RBM39-233ENST00000482563 IFT22Q9H7X7 185 aa9.02□□□□□ -0.97
RBM39-233ENST00000482563 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.02□□□□□ -0.97
RBM39-233ENST00000482563 KLHL11Q9NVR0 708 aa9.02□□□□□ -0.97
RBM39-233ENST00000482563 PNMA8BQ9ULN7 279 aaPredicted RBP9.02□□□□□ -0.97
RBM39-233ENST00000482563 FRMPD2Q68DX3 1309 aaPredicted RBP9.01□□□□□ -0.97
RBM39-233ENST00000482563 ASGR2P07307 311 aa9.01□□□□□ -0.97
RBM39-233ENST00000482563 CT47B1P0C2W7 299 aaPredicted RBP9.01□□□□□ -0.97
RBM39-233ENST00000482563 NME1P15531 152 aaKnown RBP9.01□□□□□ -0.97
RBM39-233ENST00000482563 NME2P22392 152 aa9.01□□□□□ -0.97
RBM39-233ENST00000482563 KRT72Q14CN4 511 aa9.01□□□□□ -0.97
RBM39-233ENST00000482563 C1orf228Q6PIY5 440 aa9.01□□□□□ -0.97
RBM39-233ENST00000482563 THSD4Q6ZMP0 1018 aa9.01□□□□□ -0.97
RBM39-233ENST00000482563 NCAPG2Q86XI2 1143 aa9.01□□□□□ -0.97
RBM39-233ENST00000482563 CLASRPQ8N2M8 674 aaKnown RBP9.01□□□□□ -0.97
RBM39-233ENST00000482563 GSTCDQ8NEC7 633 aa9.01□□□□□ -0.97
RBM39-233ENST00000482563 USP7Q93009 1102 aa9.01□□□□□ -0.97
RBM39-233ENST00000482563 OSBP2Q969R2 916 aa9.01□□□□□ -0.97
RBM39-233ENST00000482563 AARSD1Q9BTE6 412 aaKnown RBP9.01□□□□□ -0.97
RBM39-233ENST00000482563 LGR4Q9BXB1 951 aa9.01□□□□□ -0.97
RBM39-233ENST00000482563 CNNM2Q9H8M5 875 aa9.01□□□□□ -0.97
RBM39-233ENST00000482563 EFCC1Q9HA90 598 aa9.01□□□□□ -0.97
RBM39-233ENST00000482563 STRN4Q9NRL3 753 aa9.01□□□□□ -0.97
RBM39-233ENST00000482563 SUSD2Q9UGT4 822 aa9.01□□□□□ -0.97
RBM39-233ENST00000482563 CORINQ9Y5Q5 1042 aa9.01□□□□□ -0.97
RBM39-233ENST00000482563 SETD1BQ9UPS6 1966 aaKnown RBP9.01□□□□□ -0.97
RBM39-233ENST00000482563 U2AF1L5P0DN76 240 aaPredicted RBP9□□□□□ -0.97
RBM39-233ENST00000482563 GPSM2P81274 684 aa9□□□□□ -0.97
RBM39-233ENST00000482563 U2AF1Q01081 240 aaKnown RBP eCLIP9□□□□□ -0.973e-7■□□□□ 9.7
RBM39-233ENST00000482563 SV2CQ496J9 727 aa9□□□□□ -0.97
RBM39-233ENST00000482563 CCDC93Q567U6 631 aa9□□□□□ -0.97
RBM39-233ENST00000482563 SLC27A3Q5K4L6 730 aa9□□□□□ -0.97
RBM39-233ENST00000482563 GPR158Q5T848 1215 aa9□□□□□ -0.97
RBM39-233ENST00000482563 INTS3Q68E01 1043 aaKnown RBP9□□□□□ -0.97
RBM39-233ENST00000482563 LLGL2Q6P1M3 1020 aa9□□□□□ -0.97
RBM39-233ENST00000482563 SUGP1Q8IWZ8 645 aaKnown RBP9□□□□□ -0.97
RBM39-233ENST00000482563 MUC3BQ9H195 1237 aa9□□□□□ -0.97
RBM39-233ENST00000482563 VTA1Q9NP79 307 aa9□□□□□ -0.97
RBM39-233ENST00000482563 AAASQ9NRG9 546 aa9□□□□□ -0.97
RBM39-233ENST00000482563 FNIP2Q9P278 1114 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms