RNA–Protein interactions for RNA: ENST00000482227.5

CNKSR1-207, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 2

Gene CNKSR1, Length 2,507 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-207ENST00000482227 CCT6AP40227 531 aaKnown RBP17.56■□□□□ 0.4
CNKSR1-207ENST00000482227 DPYDQ12882 1025 aa17.56■□□□□ 0.4
CNKSR1-207ENST00000482227 FILIP1LQ4L180 1135 aa17.56■□□□□ 0.4
CNKSR1-207ENST00000482227 FBXW10Q5XX13 1052 aa17.56■□□□□ 0.4
CNKSR1-207ENST00000482227 DIS3L2Q8IYB7 885 aaKnown RBP17.56■□□□□ 0.4
CNKSR1-207ENST00000482227 IGDCC4Q8TDY8 1250 aa17.56■□□□□ 0.4
CNKSR1-207ENST00000482227 CHP1Q99653 195 aa17.56■□□□□ 0.4
CNKSR1-207ENST00000482227 SLC26A6Q9BXS9 759 aa17.56■□□□□ 0.4
CNKSR1-207ENST00000482227 CSRNP2Q9H175 543 aa17.56■□□□□ 0.4
CNKSR1-207ENST00000482227 SLC52A2Q9HAB3 445 aa17.56■□□□□ 0.4
CNKSR1-207ENST00000482227 GUCA1BQ9UMX6 200 aa17.56■□□□□ 0.4
CNKSR1-207ENST00000482227 KCNJ14Q9UNX9 436 aa17.56■□□□□ 0.4
CNKSR1-207ENST00000482227 TARSL2A2RTX5 802 aaKnown RBP17.56■□□□□ 0.4
CNKSR1-207ENST00000482227 MMP1P03956 469 aa17.56■□□□□ 0.4
CNKSR1-207ENST00000482227 ATP1A1P05023 1023 aaKnown RBP17.56■□□□□ 0.4
CNKSR1-207ENST00000482227 FAM76AQ8TAV0 307 aa17.56■□□□□ 0.4
CNKSR1-207ENST00000482227 PHRF1Q9P1Y6 1649 aaKnown RBP17.56■□□□□ 0.4
CNKSR1-207ENST00000482227 COBLO75128 1261 aa17.55■□□□□ 0.4
CNKSR1-207ENST00000482227 MCM3P25205 808 aa17.55■□□□□ 0.4
CNKSR1-207ENST00000482227 KCNH5Q8NCM2 988 aa17.55■□□□□ 0.4
CNKSR1-207ENST00000482227 SELENOOQ9BVL4 669 aa17.55■□□□□ 0.4
CNKSR1-207ENST00000482227 PHF8Q9UPP1 1060 aa17.55■□□□□ 0.4
CNKSR1-207ENST00000482227 GRIN2DO15399 1336 aa17.55■□□□□ 0.4
CNKSR1-207ENST00000482227 GOLGA8AA7E2F4 631 aa17.55■□□□□ 0.4
CNKSR1-207ENST00000482227 EBAG9O00559 213 aa17.55■□□□□ 0.4
CNKSR1-207ENST00000482227 AFMP43652 599 aa17.55■□□□□ 0.4
CNKSR1-207ENST00000482227 KRT31Q15323 416 aa17.55■□□□□ 0.4
CNKSR1-207ENST00000482227 PI16Q6UXB8 463 aa17.55■□□□□ 0.4
CNKSR1-207ENST00000482227 SH3RF1Q7Z6J0 888 aa17.55■□□□□ 0.4
CNKSR1-207ENST00000482227 LRRC10BA6NIK2 292 aa17.54■□□□□ 0.4
CNKSR1-207ENST00000482227 B4E1Z4 1266 aa17.54■□□□□ 0.4
CNKSR1-207ENST00000482227 ZAP70P43403 619 aa17.54■□□□□ 0.4
CNKSR1-207ENST00000482227 RILPL1Q5EBL4 403 aa17.54■□□□□ 0.4
CNKSR1-207ENST00000482227 NBPF14Q5TI25 921 aa17.54■□□□□ 0.4
CNKSR1-207ENST00000482227 CCNI2Q6ZMN8 369 aaPredicted RBP17.54■□□□□ 0.4
CNKSR1-207ENST00000482227 SECISBP2LQ93073 1101 aaKnown RBP17.54■□□□□ 0.4
CNKSR1-207ENST00000482227 CXorf56Q9H5V9 222 aa17.54■□□□□ 0.4
CNKSR1-207ENST00000482227 LY9Q9HBG7 655 aa17.54■□□□□ 0.4
CNKSR1-207ENST00000482227 GOLGA6CA6NDK9 693 aa17.54■□□□□ 0.4
CNKSR1-207ENST00000482227 GOLGA6DP0CG33 693 aa17.54■□□□□ 0.4
CNKSR1-207ENST00000482227 NR5A1Q13285 461 aa17.54■□□□□ 0.4
CNKSR1-207ENST00000482227 PAPD7Q5XG87 772 aaKnown RBP17.54■□□□□ 0.4
CNKSR1-207ENST00000482227 PAGE5Q96GU1 130 aa17.54■□□□□ 0.4
CNKSR1-207ENST00000482227 CRACR2AQ9BSW2 395 aa17.54■□□□□ 0.4
CNKSR1-207ENST00000482227 RABEP2Q9H5N1 569 aa17.54■□□□□ 0.4
CNKSR1-207ENST00000482227 STRN4Q9NRL3 753 aa17.54■□□□□ 0.4
CNKSR1-207ENST00000482227 GOLGA6AQ9NYA3 693 aa17.54■□□□□ 0.4
CNKSR1-207ENST00000482227 TFR2Q9UP52 801 aa17.54■□□□□ 0.4
CNKSR1-207ENST00000482227 SAR1BQ9Y6B6 198 aa17.54■□□□□ 0.4
CNKSR1-207ENST00000482227 EPN1Q9Y6I3 576 aaPredicted RBP17.54■□□□□ 0.4
CNKSR1-207ENST00000482227 SPEF2Q9C093 1822 aa17.54■□□□□ 0.4
CNKSR1-207ENST00000482227 STK36Q9NRP7 1315 aa17.54■□□□□ 0.4
CNKSR1-207ENST00000482227 ADAMTS7Q9UKP4 1686 aa17.53■□□□□ 0.4
CNKSR1-207ENST00000482227 NDUFA10O95299 355 aa17.53■□□□□ 0.4
CNKSR1-207ENST00000482227 FMNL1O95466 1100 aaPredicted RBP17.53■□□□□ 0.4
CNKSR1-207ENST00000482227 KRT9P35527 623 aa17.53■□□□□ 0.4
CNKSR1-207ENST00000482227 SSRP1Q08945 709 aaKnown RBP17.53■□□□□ 0.4
CNKSR1-207ENST00000482227 SGMS1Q86VZ5 419 aa17.53■□□□□ 0.4
CNKSR1-207ENST00000482227 PLBD2Q8NHP8 589 aa17.53■□□□□ 0.4
CNKSR1-207ENST00000482227 RBM33Q96EV2 1170 aaKnown RBP17.53■□□□□ 0.4
CNKSR1-207ENST00000482227 NUP88Q99567 741 aaPredicted RBP17.53■□□□□ 0.4
CNKSR1-207ENST00000482227 LIMA1Q9UHB6 759 aaKnown RBP17.53■□□□□ 0.4
CNKSR1-207ENST00000482227 SNRPA1P09661 255 aaKnown RBP17.53■□□□□ 0.4
CNKSR1-207ENST00000482227 BCAS4Q8TDM0 211 aa17.53■□□□□ 0.4
CNKSR1-207ENST00000482227 EPSTI1Q96J88 318 aa17.53■□□□□ 0.4
CNKSR1-207ENST00000482227 CAPZA3Q96KX2 299 aa17.53■□□□□ 0.4
CNKSR1-207ENST00000482227 SLIT3O75094 1523 aa17.52■□□□□ 0.4
CNKSR1-207ENST00000482227 N4BP3O15049 544 aa17.52■□□□□ 0.4
CNKSR1-207ENST00000482227 EIF3HO15372 352 aaKnown RBP eCLIP17.52■□□□□ 0.4
CNKSR1-207ENST00000482227 CIAO1O76071 339 aa17.52■□□□□ 0.4
CNKSR1-207ENST00000482227 PPFIA1Q13136 1202 aa17.52■□□□□ 0.4
CNKSR1-207ENST00000482227 XAGE2Q96GT9 111 aa17.52■□□□□ 0.4
CNKSR1-207ENST00000482227 VPS16Q9H269 839 aa17.52■□□□□ 0.4
CNKSR1-207ENST00000482227 INCENPQ9NQS7 918 aa17.52■□□□□ 0.4
CNKSR1-207ENST00000482227 PDE2AO00408 941 aaPredicted RBP17.52■□□□□ 0.39
CNKSR1-207ENST00000482227 MNAT1P51948 309 aa17.52■□□□□ 0.39
CNKSR1-207ENST00000482227 NFXL1Q6ZNB6 911 aa17.52■□□□□ 0.39
CNKSR1-207ENST00000482227 TMEM87BQ96K49 555 aa17.52■□□□□ 0.39
CNKSR1-207ENST00000482227 CAPS2Q9BXY5 557 aa17.52■□□□□ 0.39
CNKSR1-207ENST00000482227 FOXP1Q9H334 677 aaPredicted RBP17.52■□□□□ 0.39
CNKSR1-207ENST00000482227 AXIN2Q9Y2T1 843 aa17.52■□□□□ 0.39
CNKSR1-207ENST00000482227 BCL9LQ86UU0 1499 aa17.52■□□□□ 0.39
CNKSR1-207ENST00000482227 GOLGA6BA6NDN3 693 aa17.51■□□□□ 0.39
CNKSR1-207ENST00000482227 HERVK_113P62684 666 aa17.51■□□□□ 0.39
CNKSR1-207ENST00000482227 OXER1Q8TDS5 423 aa17.51■□□□□ 0.39
CNKSR1-207ENST00000482227 SH3GL2Q99962 352 aa17.51■□□□□ 0.39
CNKSR1-207ENST00000482227 LMTK3Q96Q04 1460 aa17.51■□□□□ 0.39
CNKSR1-207ENST00000482227 IFNAR1P17181 557 aa17.51■□□□□ 0.39
CNKSR1-207ENST00000482227 SAFBQ15424 915 aaKnown RBP eCLIP17.51■□□□□ 0.39
CNKSR1-207ENST00000482227 AENQ8WTP8 325 aaKnown RBP17.51■□□□□ 0.39
CNKSR1-207ENST00000482227 GSDMAQ96QA5 445 aa17.51■□□□□ 0.39
CNKSR1-207ENST00000482227 HAUS4Q9H6D7 363 aa17.51■□□□□ 0.39
CNKSR1-207ENST00000482227 CEP126Q9P2H0 1117 aa17.51■□□□□ 0.39
CNKSR1-207ENST00000482227 CTNND2Q9UQB3 1225 aa17.51■□□□□ 0.39
CNKSR1-207ENST00000482227 COPB1P53618 953 aaKnown RBP17.5■□□□□ 0.39
CNKSR1-207ENST00000482227 TMEM67Q5HYA8 995 aa17.5■□□□□ 0.39
CNKSR1-207ENST00000482227 CNPY4Q8N129 248 aa17.5■□□□□ 0.39
CNKSR1-207ENST00000482227 RPGRIP1Q96KN7 1286 aa17.5■□□□□ 0.39
CNKSR1-207ENST00000482227 TAB2Q9NYJ8 693 aa17.5■□□□□ 0.39
CNKSR1-207ENST00000482227 AFDNP55196 1824 aaKnown RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms