RNA–Protein interactions for RNA: ENST00000482172.5

IFT88-206, Transcript of intraflagellar transport 88, humanhuman

TSL 3

Gene IFT88, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-206ENST00000482172 CALM3P0DP25 149 aa14.64□□□□□ -0.07
IFT88-206ENST00000482172 DCAF15Q66K64 600 aa14.64□□□□□ -0.07
IFT88-206ENST00000482172 TMEM179Q6ZVK1 233 aa14.64□□□□□ -0.07
IFT88-206ENST00000482172 LLPHQ9BRT6 129 aaKnown RBP14.64□□□□□ -0.07
IFT88-206ENST00000482172 SENP2Q9HC62 589 aa14.64□□□□□ -0.07
IFT88-206ENST00000482172 GINM1Q9NU53 330 aa14.64□□□□□ -0.07
IFT88-206ENST00000482172 MTMR4Q9NYA4 1195 aa14.64□□□□□ -0.07
IFT88-206ENST00000482172 HPS5Q9UPZ3 1129 aa14.64□□□□□ -0.07
IFT88-206ENST00000482172 FAM196BA6NMK8 535 aa14.63□□□□□ -0.07
IFT88-206ENST00000482172 GOLGA8BA8MQT2 603 aa14.63□□□□□ -0.07
IFT88-206ENST00000482172 TOP1P11387 765 aaKnown RBP14.63□□□□□ -0.07
IFT88-206ENST00000482172 ST3GAL1Q11201 340 aa14.63□□□□□ -0.07
IFT88-206ENST00000482172 SCRN1Q12765 414 aa14.63□□□□□ -0.07
IFT88-206ENST00000482172 ABCB5Q2M3G0 1257 aa14.63□□□□□ -0.07
IFT88-206ENST00000482172 SUPT20HL1Q3ZLR7 823 aa14.63□□□□□ -0.07
IFT88-206ENST00000482172 CATIPQ7Z7H3 387 aa14.63□□□□□ -0.07
IFT88-206ENST00000482172 SULF1Q8IWU6 871 aa14.63□□□□□ -0.07
IFT88-206ENST00000482172 CDAN1Q8IWY9 1227 aa14.63□□□□□ -0.07
IFT88-206ENST00000482172 ZNF654Q8IZM8 581 aa14.63□□□□□ -0.07
IFT88-206ENST00000482172 CEP95Q96GE4 821 aa14.63□□□□□ -0.07
IFT88-206ENST00000482172 MAP3K14Q99558 947 aa14.63□□□□□ -0.07
IFT88-206ENST00000482172 KANSL2Q9H9L4 492 aa14.63□□□□□ -0.07
IFT88-206ENST00000482172 CABP5Q9NP86 173 aa14.63□□□□□ -0.07
IFT88-206ENST00000482172 TTLL1O95922 423 aa14.62□□□□□ -0.07
IFT88-206ENST00000482172 SLURP2P0DP57 97 aa14.62□□□□□ -0.07
IFT88-206ENST00000482172 VEGFAP15692 232 aaPredicted RBP14.62□□□□□ -0.07
IFT88-206ENST00000482172 METAP2P50579 478 aaKnown RBP eCLIP14.62□□□□□ -0.07
IFT88-206ENST00000482172 STK3Q13188 491 aa14.62□□□□□ -0.07
IFT88-206ENST00000482172 NBPF12Q5TAG4 269 aaPredicted RBP14.62□□□□□ -0.07
IFT88-206ENST00000482172 CCDC83Q8IWF9 413 aa14.62□□□□□ -0.07
IFT88-206ENST00000482172 NECAB1Q8N987 351 aa14.62□□□□□ -0.07
IFT88-206ENST00000482172 KAT14Q9H8E8 782 aa14.62□□□□□ -0.07
IFT88-206ENST00000482172 NYAP2Q9P242 653 aa14.62□□□□□ -0.07
IFT88-206ENST00000482172 NAP1L2Q9ULW6 460 aaPredicted RBP14.62□□□□□ -0.07
IFT88-206ENST00000482172 CCDC196A0A1B0GTZ2 297 aa14.61□□□□□ -0.07
IFT88-206ENST00000482172 GOLGA8AA7E2F4 631 aa14.61□□□□□ -0.07
IFT88-206ENST00000482172 PHF20L1A8MW92 1017 aa14.61□□□□□ -0.07
IFT88-206ENST00000482172 MPHOSPH10O00566 681 aaKnown RBP14.61□□□□□ -0.07
IFT88-206ENST00000482172 CAP2P40123 477 aa14.61□□□□□ -0.07
IFT88-206ENST00000482172 TROAPQ12815 778 aa14.61□□□□□ -0.07
IFT88-206ENST00000482172 MIGA2Q7L4E1 593 aa14.61□□□□□ -0.07
IFT88-206ENST00000482172 FANCBQ8NB91 859 aa14.61□□□□□ -0.07
IFT88-206ENST00000482172 MKL1Q969V6 931 aa14.61□□□□□ -0.07
IFT88-206ENST00000482172 TMEM47Q9BQJ4 181 aa14.61□□□□□ -0.07
IFT88-206ENST00000482172 ZNF341Q9BYN7 854 aa14.61□□□□□ -0.07
IFT88-206ENST00000482172 ZNF112Q9UJU3 913 aa14.61□□□□□ -0.07
IFT88-206ENST00000482172 SYNPO2Q9UMS6 1093 aa14.61□□□□□ -0.07
IFT88-206ENST00000482172 STX8Q9UNK0 236 aa14.61□□□□□ -0.07
IFT88-206ENST00000482172 SCAF8Q9UPN6 1271 aaKnown RBP14.61□□□□□ -0.07
IFT88-206ENST00000482172 CTNND1O60716 968 aaKnown RBP14.6□□□□□ -0.07
IFT88-206ENST00000482172 ASNSP08243 561 aa14.6□□□□□ -0.07
IFT88-206ENST00000482172 PDIA4P13667 645 aaKnown RBP14.6□□□□□ -0.07
IFT88-206ENST00000482172 GUCY1A2P33402 732 aa14.6□□□□□ -0.07
IFT88-206ENST00000482172 DDIT3P35638 169 aa14.6□□□□□ -0.07
IFT88-206ENST00000482172 CCT2P78371 535 aaKnown RBP14.6□□□□□ -0.07
IFT88-206ENST00000482172 RRP1BQ14684 758 aaKnown RBP14.6□□□□□ -0.07
IFT88-206ENST00000482172 CPLX2Q6PUV4 134 aaKnown RBP14.6□□□□□ -0.07
IFT88-206ENST00000482172 CDC37L1Q7L3B6 337 aa14.6□□□□□ -0.07
IFT88-206ENST00000482172 KRT26Q7Z3Y9 468 aa14.6□□□□□ -0.07
IFT88-206ENST00000482172 MICU3Q86XE3 530 aa14.6□□□□□ -0.07
IFT88-206ENST00000482172 PNMA1Q8ND90 353 aa14.6□□□□□ -0.07
IFT88-206ENST00000482172 SMARCC2Q8TAQ2 1214 aa14.6□□□□□ -0.07
IFT88-206ENST00000482172 RBM28Q9NW13 759 aaKnown RBP14.6□□□□□ -0.07
IFT88-206ENST00000482172 CIZ1Q9ULV3 898 aaPredicted RBP14.6□□□□□ -0.07
IFT88-206ENST00000482172 SMC3Q9UQE7 1217 aa14.6□□□□□ -0.07
IFT88-206ENST00000482172 CDKL5O76039 1030 aa14.59□□□□□ -0.07
IFT88-206ENST00000482172 GDF11O95390 407 aa14.59□□□□□ -0.07
IFT88-206ENST00000482172 GH2P01242 217 aa14.59□□□□□ -0.07
IFT88-206ENST00000482172 KIF5BP33176 963 aa14.59□□□□□ -0.07
IFT88-206ENST00000482172 HMGN5P82970 282 aaKnown RBP14.59□□□□□ -0.07
IFT88-206ENST00000482172 SEPT2Q15019 361 aa14.59□□□□□ -0.07
IFT88-206ENST00000482172 RTN1Q16799 776 aa14.59□□□□□ -0.07
IFT88-206ENST00000482172 EAPPQ56P03 285 aaPredicted RBP14.59□□□□□ -0.07
IFT88-206ENST00000482172 SPRYD3Q8NCJ5 442 aa14.59□□□□□ -0.07
IFT88-206ENST00000482172 RRAGCQ9HB90 399 aa14.59□□□□□ -0.07
IFT88-206ENST00000482172 FAM217BQ9NTX9 383 aaPredicted RBP14.59□□□□□ -0.07
IFT88-206ENST00000482172 ZBTB21Q9ULJ3 1066 aa14.59□□□□□ -0.07
IFT88-206ENST00000482172 POLR2AP24928 1970 aaKnown RBP14.58□□□□□ -0.07
IFT88-206ENST00000482172 CPLX1O14810 134 aa14.58□□□□□ -0.08
IFT88-206ENST00000482172 CTDNEP1O95476 244 aa14.58□□□□□ -0.08
IFT88-206ENST00000482172 CDC27P30260 824 aa14.58□□□□□ -0.08
IFT88-206ENST00000482172 GNAQP50148 359 aa14.58□□□□□ -0.08
IFT88-206ENST00000482172 JAG1P78504 1218 aa14.58□□□□□ -0.08
IFT88-206ENST00000482172 ICA1Q05084 483 aa14.58□□□□□ -0.08
IFT88-206ENST00000482172 GRM4Q14833 912 aa14.58□□□□□ -0.08
IFT88-206ENST00000482172 NSUN7Q8NE18 718 aaKnown RBP14.58□□□□□ -0.08
IFT88-206ENST00000482172 CTCFLQ8NI51 663 aaPredicted RBP14.58□□□□□ -0.08
IFT88-206ENST00000482172 NUP133Q8WUM0 1156 aa14.58□□□□□ -0.08
IFT88-206ENST00000482172 MYL10Q9BUA6 226 aa14.58□□□□□ -0.08
IFT88-206ENST00000482172 NCOA5Q9HCD5 579 aaKnown RBP14.58□□□□□ -0.08
IFT88-206ENST00000482172 CLIP2Q9UDT6 1046 aa14.58□□□□□ -0.08
IFT88-206ENST00000482172 SSC5DA1L4H1 1573 aa14.57□□□□□ -0.08
IFT88-206ENST00000482172 ADM5C9JUS6 153 aa14.57□□□□□ -0.08
IFT88-206ENST00000482172 EEF2P13639 858 aaKnown RBP14.57□□□□□ -0.08
IFT88-206ENST00000482172 IFNAR1P17181 557 aa14.57□□□□□ -0.08
IFT88-206ENST00000482172 ADD1P35611 737 aaKnown RBP14.57□□□□□ -0.08
IFT88-206ENST00000482172 RAB3GAP1Q15042 981 aa14.57□□□□□ -0.08
IFT88-206ENST00000482172 NTRK3Q16288 839 aa14.57□□□□□ -0.08
IFT88-206ENST00000482172 USP48Q86UV5 1035 aa14.57□□□□□ -0.08
IFT88-206ENST00000482172 LDHDQ86WU2 507 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms