RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 A0A1W2PRG0 241 aa11.73□□□□□ -0.53
TMEM39A-207ENST00000482162 USP17L15C9J2P7 530 aa11.73□□□□□ -0.53
TMEM39A-207ENST00000482162 USP17L13C9JLJ4 530 aa11.73□□□□□ -0.53
TMEM39A-207ENST00000482162 USP17L11C9JVI0 530 aa11.73□□□□□ -0.53
TMEM39A-207ENST00000482162 USP17L18D6R9N7 530 aa11.73□□□□□ -0.53
TMEM39A-207ENST00000482162 USP17L22D6RA61 530 aa11.73□□□□□ -0.53
TMEM39A-207ENST00000482162 USP17L17D6RBQ6 530 aa11.73□□□□□ -0.53
TMEM39A-207ENST00000482162 USP17L19D6RCP7 530 aa11.73□□□□□ -0.53
TMEM39A-207ENST00000482162 USP17L20D6RJB6 530 aa11.73□□□□□ -0.53
TMEM39A-207ENST00000482162 SMIM22K7EJ46 135 aa11.73□□□□□ -0.53
TMEM39A-207ENST00000482162 XRCC5P13010 732 aaKnown RBP11.73□□□□□ -0.53
TMEM39A-207ENST00000482162 ELNP15502 786 aa11.73□□□□□ -0.53
TMEM39A-207ENST00000482162 USP14P54578 494 aa11.73□□□□□ -0.53
TMEM39A-207ENST00000482162 UBXN2AP68543 259 aa11.73□□□□□ -0.53
TMEM39A-207ENST00000482162 USP17L24Q0WX57 530 aa11.73□□□□□ -0.53
TMEM39A-207ENST00000482162 SEPT2Q15019 361 aa11.73□□□□□ -0.53
TMEM39A-207ENST00000482162 Q3C1V9 767 aa11.73□□□□□ -0.53
TMEM39A-207ENST00000482162 ZSCAN25Q6NSZ9 544 aa11.73□□□□□ -0.53
TMEM39A-207ENST00000482162 KBTBD3Q8NAB2 608 aa11.73□□□□□ -0.53
TMEM39A-207ENST00000482162 STRBPQ96SI9 672 aaKnown RBP11.73□□□□□ -0.53
TMEM39A-207ENST00000482162 CRISPLD2Q9H0B8 497 aa11.73□□□□□ -0.53
TMEM39A-207ENST00000482162 PUS7LQ9H0K6 701 aaKnown RBP11.73□□□□□ -0.53
TMEM39A-207ENST00000482162 UNC93B1Q9H1C4 597 aa11.73□□□□□ -0.53
TMEM39A-207ENST00000482162 CABP5Q9NP86 173 aa11.73□□□□□ -0.53
TMEM39A-207ENST00000482162 BRCA2P51587 3418 aa11.73□□□□□ -0.53
TMEM39A-207ENST00000482162 USP17L12C9JPN9 530 aa11.72□□□□□ -0.53
TMEM39A-207ENST00000482162 USP17L21D6R901 530 aa11.72□□□□□ -0.53
TMEM39A-207ENST00000482162 PEX10O60683 326 aa11.72□□□□□ -0.53
TMEM39A-207ENST00000482162 CNMDO75829 334 aa11.72□□□□□ -0.53
TMEM39A-207ENST00000482162 SGPL1O95470 568 aa11.72□□□□□ -0.53
TMEM39A-207ENST00000482162 MYCP01106 439 aaPredicted RBP11.72□□□□□ -0.53
TMEM39A-207ENST00000482162 INHAP05111 366 aa11.72□□□□□ -0.53
TMEM39A-207ENST00000482162 VCAM1P19320 739 aa11.72□□□□□ -0.53
TMEM39A-207ENST00000482162 RRP1P56182 461 aaKnown RBP11.72□□□□□ -0.53
TMEM39A-207ENST00000482162 RAB3GAP1Q15042 981 aa11.72□□□□□ -0.53
TMEM39A-207ENST00000482162 GIMAP6Q6P9H5 292 aa11.72□□□□□ -0.53
TMEM39A-207ENST00000482162 TMEM179Q6ZVK1 233 aa11.72□□□□□ -0.53
TMEM39A-207ENST00000482162 SLC44A5Q8NCS7 719 aa11.72□□□□□ -0.53
TMEM39A-207ENST00000482162 CCDC17Q96LX7 622 aa11.72□□□□□ -0.53
TMEM39A-207ENST00000482162 RNF208Q9H0X6 261 aa11.72□□□□□ -0.53
TMEM39A-207ENST00000482162 RABGAP1Q9Y3P9 1069 aa11.72□□□□□ -0.53
TMEM39A-207ENST00000482162 CEP290O15078 2479 aa11.71□□□□□ -0.53
TMEM39A-207ENST00000482162 TTC41PQ6P2S7 1318 aa11.71□□□□□ -0.53
TMEM39A-207ENST00000482162 SALL3Q9BXA9 1300 aa11.71□□□□□ -0.53
TMEM39A-207ENST00000482162 IGHA2P01877 340 aa11.71□□□□□ -0.53
TMEM39A-207ENST00000482162 MAPK4P31152 587 aa11.71□□□□□ -0.53
TMEM39A-207ENST00000482162 CDK8P49336 464 aa11.71□□□□□ -0.53
TMEM39A-207ENST00000482162 ERVK-9P63128 1117 aa11.71□□□□□ -0.53
TMEM39A-207ENST00000482162 ERVK-24P63145 666 aa11.71□□□□□ -0.53
TMEM39A-207ENST00000482162 SBK1Q52WX2 424 aa11.71□□□□□ -0.53
TMEM39A-207ENST00000482162 MORN1Q5T089 497 aa11.71□□□□□ -0.53
TMEM39A-207ENST00000482162 MAP3K21Q5TCX8 1036 aa11.71□□□□□ -0.53
TMEM39A-207ENST00000482162 CTR9Q6PD62 1173 aa11.71□□□□□ -0.53
TMEM39A-207ENST00000482162 C16orf86Q6ZW13 317 aa11.71□□□□□ -0.53
TMEM39A-207ENST00000482162 PI4K2BQ8TCG2 481 aa11.71□□□□□ -0.53
TMEM39A-207ENST00000482162 U2AF1L4Q8WU68 220 aaKnown RBP11.71□□□□□ -0.53
TMEM39A-207ENST00000482162 OSBP2Q969R2 916 aa11.71□□□□□ -0.53
TMEM39A-207ENST00000482162 DYNLL2Q96FJ2 89 aa11.71□□□□□ -0.53
TMEM39A-207ENST00000482162 PORCNQ9H237 461 aa11.71□□□□□ -0.53
TMEM39A-207ENST00000482162 CYP2D7A0A087X1C5 515 aa11.7□□□□□ -0.54
TMEM39A-207ENST00000482162 GSG1L2A8MUP6 293 aa11.7□□□□□ -0.54
TMEM39A-207ENST00000482162 RNF113AO15541 343 aaKnown RBP11.7□□□□□ -0.54
TMEM39A-207ENST00000482162 HMGCRP04035 888 aa11.7□□□□□ -0.54
TMEM39A-207ENST00000482162 ZFYP08048 801 aaPredicted RBP11.7□□□□□ -0.54
TMEM39A-207ENST00000482162 KIAA1755Q5JYT7 1200 aa11.7□□□□□ -0.54
TMEM39A-207ENST00000482162 SOCS4Q8WXH5 440 aa11.7□□□□□ -0.54
TMEM39A-207ENST00000482162 APPBP2Q92624 585 aa11.7□□□□□ -0.54
TMEM39A-207ENST00000482162 GPATCH3Q96I76 525 aa11.7□□□□□ -0.54
TMEM39A-207ENST00000482162 FEZ1Q99689 392 aa11.7□□□□□ -0.54
TMEM39A-207ENST00000482162 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.7□□□□□ -0.54
TMEM39A-207ENST00000482162 PCDH10Q9P2E7 1040 aa11.7□□□□□ -0.54
TMEM39A-207ENST00000482162 BIN2Q9UBW5 565 aaPredicted RBP11.7□□□□□ -0.54
TMEM39A-207ENST00000482162 TMX2Q9Y320 296 aa11.7□□□□□ -0.54
TMEM39A-207ENST00000482162 SLC4A4Q9Y6R1 1079 aa11.7□□□□□ -0.54
TMEM39A-207ENST00000482162 PLXNB2O15031 1838 aa11.7□□□□□ -0.54
TMEM39A-207ENST00000482162 AKR1B1P15121 316 aa11.69□□□□□ -0.54
TMEM39A-207ENST00000482162 KCNA4P22459 653 aa11.69□□□□□ -0.54
TMEM39A-207ENST00000482162 HDAC1Q13547 482 aaPredicted RBP11.69□□□□□ -0.54
TMEM39A-207ENST00000482162 COG2Q14746 738 aa11.69□□□□□ -0.54
TMEM39A-207ENST00000482162 TSHZ3Q63HK5 1081 aa11.69□□□□□ -0.54
TMEM39A-207ENST00000482162 OTUD7AQ8TE49 926 aaPredicted RBP11.69□□□□□ -0.54
TMEM39A-207ENST00000482162 LPAR1Q92633 364 aa11.69□□□□□ -0.54
TMEM39A-207ENST00000482162 NUDT12Q9BQG2 462 aa11.69□□□□□ -0.54
TMEM39A-207ENST00000482162 BCL11AQ9H165 835 aa11.69□□□□□ -0.54
TMEM39A-207ENST00000482162 RPAP3Q9H6T3 665 aaPredicted RBP11.69□□□□□ -0.54
TMEM39A-207ENST00000482162 HOXC10Q9NYD6 342 aa11.69□□□□□ -0.54
TMEM39A-207ENST00000482162 BTBD7Q9P203 1132 aa11.69□□□□□ -0.54
TMEM39A-207ENST00000482162 ADAMTS5Q9UNA0 930 aa11.69□□□□□ -0.54
TMEM39A-207ENST00000482162 NAV1Q8NEY1 1877 aa11.69□□□□□ -0.54
TMEM39A-207ENST00000482162 RPTORQ8N122 1335 aa11.68□□□□□ -0.54
TMEM39A-207ENST00000482162 SPDYE16A6NNV3 312 aaPredicted RBP11.68□□□□□ -0.54
TMEM39A-207ENST00000482162 GLRX3O76003 335 aaKnown RBP11.68□□□□□ -0.54
TMEM39A-207ENST00000482162 HOXC6P09630 235 aa11.68□□□□□ -0.54
TMEM39A-207ENST00000482162 MNX1P50219 401 aaPredicted RBP11.68□□□□□ -0.54
TMEM39A-207ENST00000482162 AAMPQ13685 434 aa11.68□□□□□ -0.54
TMEM39A-207ENST00000482162 ZYXQ15942 572 aaKnown RBP11.68□□□□□ -0.54
TMEM39A-207ENST00000482162 GPR142Q7Z601 462 aa11.68□□□□□ -0.54
TMEM39A-207ENST00000482162 PLEKHH3Q7Z736 793 aa11.68□□□□□ -0.54
TMEM39A-207ENST00000482162 TRMT44Q8IYL2 757 aaKnown RBP11.68□□□□□ -0.54
TMEM39A-207ENST00000482162 TRIB2Q92519 343 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms