RNA–Protein interactions for RNA: ENST00000481484.1

VPS13D-208, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 360 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-208ENST00000481484 TBC1D8O95759 1140 aa5.11□□□□□ -1.59
VPS13D-208ENST00000481484 JUNDP17535 347 aa5.11□□□□□ -1.59
VPS13D-208ENST00000481484 CAPN2P17655 700 aa5.11□□□□□ -1.59
VPS13D-208ENST00000481484 GSTO1P78417 241 aa5.11□□□□□ -1.59
VPS13D-208ENST00000481484 SP3Q02447 781 aa5.11□□□□□ -1.59
VPS13D-208ENST00000481484 CRHR2Q13324 411 aa5.11□□□□□ -1.59
VPS13D-208ENST00000481484 PRKG1Q13976 671 aa5.11□□□□□ -1.59
VPS13D-208ENST00000481484 APOBEC3HQ6NTF7 200 aaKnown RBP5.11□□□□□ -1.59
VPS13D-208ENST00000481484 ATF7IPQ6VMQ6 1270 aa5.11□□□□□ -1.59
VPS13D-208ENST00000481484 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.11□□□□□ -1.59
VPS13D-208ENST00000481484 OTOP1Q7RTM1 612 aa5.11□□□□□ -1.59
VPS13D-208ENST00000481484 ATG9AQ7Z3C6 839 aa5.11□□□□□ -1.59
VPS13D-208ENST00000481484 FAM151AQ8WW52 585 aa5.11□□□□□ -1.59
VPS13D-208ENST00000481484 BRI3BPQ8WY22 251 aa5.11□□□□□ -1.59
VPS13D-208ENST00000481484 IDI2Q9BXS1 227 aa5.11□□□□□ -1.59
VPS13D-208ENST00000481484 ELP3Q9H9T3 547 aa5.11□□□□□ -1.59
VPS13D-208ENST00000481484 EFCC1Q9HA90 598 aa5.11□□□□□ -1.59
VPS13D-208ENST00000481484 SCAF8Q9UPN6 1271 aaKnown RBP5.11□□□□□ -1.59
VPS13D-208ENST00000481484 KCNH4Q9UQ05 1017 aa5.11□□□□□ -1.59
VPS13D-208ENST00000481484 SLC45A1Q9Y2W3 748 aa5.11□□□□□ -1.59
VPS13D-208ENST00000481484 DAGLAQ9Y4D2 1042 aa5.11□□□□□ -1.59
VPS13D-208ENST00000481484 TRIM17Q9Y577 477 aa5.11□□□□□ -1.59
VPS13D-208ENST00000481484 LRRFIP2Q9Y608 721 aaKnown RBP5.11□□□□□ -1.59
VPS13D-208ENST00000481484 SNCAIPQ9Y6H5 919 aa5.11□□□□□ -1.59
VPS13D-208ENST00000481484 MROH7-TTC4A0A0A0MT08 1334 aa5.11□□□□□ -1.59
VPS13D-208ENST00000481484 AOX1Q06278 1338 aa5.11□□□□□ -1.59
VPS13D-208ENST00000481484 DOCK3Q8IZD9 2030 aa5.11□□□□□ -1.59
VPS13D-208ENST00000481484 SPTLC1O15269 473 aa5.1□□□□□ -1.59
VPS13D-208ENST00000481484 SRGAP3O43295 1099 aa5.1□□□□□ -1.59
VPS13D-208ENST00000481484 TLR2O60603 784 aa5.1□□□□□ -1.59
VPS13D-208ENST00000481484 DGAT1O75907 488 aa5.1□□□□□ -1.59
VPS13D-208ENST00000481484 GNAI2P04899 355 aa5.1□□□□□ -1.59
VPS13D-208ENST00000481484 UQCRFS1P1P0C7P4 283 aa5.1□□□□□ -1.59
VPS13D-208ENST00000481484 ARID4AP29374 1257 aaPredicted RBP5.1□□□□□ -1.59
VPS13D-208ENST00000481484 PRDX5P30044 214 aa5.1□□□□□ -1.59
VPS13D-208ENST00000481484 SOX10P56693 466 aa5.1□□□□□ -1.59
VPS13D-208ENST00000481484 RASGRF1Q13972 1273 aa5.1□□□□□ -1.59
VPS13D-208ENST00000481484 SLC9C1Q4G0N8 1177 aa5.1□□□□□ -1.59
VPS13D-208ENST00000481484 FRMPD3Q5JV73 1810 aa5.1□□□□□ -1.59
VPS13D-208ENST00000481484 CCDC102BQ68D86 513 aa5.1□□□□□ -1.59
VPS13D-208ENST00000481484 DESI1Q6ICB0 168 aa5.1□□□□□ -1.59
VPS13D-208ENST00000481484 ZBED9Q6R2W3 1325 aa5.1□□□□□ -1.59
VPS13D-208ENST00000481484 ANKRD23Q86SG2 305 aa5.1□□□□□ -1.59
VPS13D-208ENST00000481484 NBPF11Q86T75 865 aa5.1□□□□□ -1.59
VPS13D-208ENST00000481484 FTSJ3Q8IY81 847 aaKnown RBP5.1□□□□□ -1.59
VPS13D-208ENST00000481484 KLHDC4Q8TBB5 520 aa5.1□□□□□ -1.59
VPS13D-208ENST00000481484 MEIS3Q99687 375 aa5.1□□□□□ -1.59
VPS13D-208ENST00000481484 NOL10Q9BSC4 688 aaKnown RBP5.1□□□□□ -1.59
VPS13D-208ENST00000481484 SIL1Q9H173 461 aa5.1□□□□□ -1.59
VPS13D-208ENST00000481484 GPR108Q9NPR9 543 aa5.1□□□□□ -1.59
VPS13D-208ENST00000481484 ZNF236Q9UL36 1845 aa5.1□□□□□ -1.59
VPS13D-208ENST00000481484 NOB1Q9ULX3 412 aaKnown RBP5.1□□□□□ -1.59
VPS13D-208ENST00000481484 IQSEC3Q9UPP2 1182 aaPredicted RBP5.1□□□□□ -1.59
VPS13D-208ENST00000481484 PCDHAC2Q9Y5I4 1007 aa5.1□□□□□ -1.59
VPS13D-208ENST00000481484 A0A0G2JMZ2 1700 aa5.09□□□□□ -1.59
VPS13D-208ENST00000481484 ADGRA2Q96PE1 1338 aa5.09□□□□□ -1.59
VPS13D-208ENST00000481484 A0A1B0GUL7 405 aa5.09□□□□□ -1.59
VPS13D-208ENST00000481484 TNFRSF10AO00220 468 aa5.09□□□□□ -1.59
VPS13D-208ENST00000481484 CXCL11O14625 94 aa5.09□□□□□ -1.59
VPS13D-208ENST00000481484 LDHCP07864 332 aa5.09□□□□□ -1.59
VPS13D-208ENST00000481484 TRIM27P14373 513 aa5.09□□□□□ -1.59
VPS13D-208ENST00000481484 HOXD10P28358 340 aa5.09□□□□□ -1.59
VPS13D-208ENST00000481484 PHKA1P46020 1223 aa5.09□□□□□ -1.59
VPS13D-208ENST00000481484 FOXC1Q12948 553 aa5.09□□□□□ -1.59
VPS13D-208ENST00000481484 TRIM32Q13049 653 aa5.09□□□□□ -1.59
VPS13D-208ENST00000481484 MTMR2Q13614 643 aa5.09□□□□□ -1.59
VPS13D-208ENST00000481484 TUSC1Q2TAM9 212 aa5.09□□□□□ -1.59
VPS13D-208ENST00000481484 GORABQ5T7V8 394 aa5.09□□□□□ -1.59
VPS13D-208ENST00000481484 ZKSCAN2Q63HK3 967 aa5.09□□□□□ -1.59
VPS13D-208ENST00000481484 CDC42EP5Q6NZY7 148 aa5.09□□□□□ -1.59
VPS13D-208ENST00000481484 ERICH6Q7L0X2 663 aa5.09□□□□□ -1.59
VPS13D-208ENST00000481484 FASTKD5Q7L8L6 764 aaKnown RBP5.09□□□□□ -1.59
VPS13D-208ENST00000481484 SCYL3Q8IZE3 742 aa5.09□□□□□ -1.59
VPS13D-208ENST00000481484 CD99L2Q8TCZ2 262 aa5.09□□□□□ -1.59
VPS13D-208ENST00000481484 ZNF333Q96JL9 665 aa5.09□□□□□ -1.59
VPS13D-208ENST00000481484 PICK1Q9NRD5 415 aa5.09□□□□□ -1.59
VPS13D-208ENST00000481484 GINM1Q9NU53 330 aa5.09□□□□□ -1.59
VPS13D-208ENST00000481484 TOR4AQ9NXH8 423 aa5.09□□□□□ -1.59
VPS13D-208ENST00000481484 HERC5Q9UII4 1024 aaKnown RBP5.09□□□□□ -1.59
VPS13D-208ENST00000481484 ZNF112Q9UJU3 913 aa5.09□□□□□ -1.59
VPS13D-208ENST00000481484 PTPN22Q9Y2R2 807 aa5.09□□□□□ -1.59
VPS13D-208ENST00000481484 PCDHB15Q9Y5E8 787 aa5.09□□□□□ -1.59
VPS13D-208ENST00000481484 A0A0G2JLL6 359 aaPredicted RBP5.08□□□□□ -1.6
VPS13D-208ENST00000481484 BTBD19C9JJ37 291 aa5.08□□□□□ -1.6
VPS13D-208ENST00000481484 WNT7AO00755 349 aa5.08□□□□□ -1.6
VPS13D-208ENST00000481484 BTDP43251 543 aa5.08□□□□□ -1.6
VPS13D-208ENST00000481484 RGS3P49796 1198 aa5.08□□□□□ -1.6
VPS13D-208ENST00000481484 CACNB3P54284 484 aa5.08□□□□□ -1.6
VPS13D-208ENST00000481484 LACTBP83111 547 aaPredicted RBP5.08□□□□□ -1.6
VPS13D-208ENST00000481484 G3BP1Q13283 466 aaKnown RBP eCLIP5.08□□□□□ -1.6
VPS13D-208ENST00000481484 PABPC4Q13310 644 aaKnown RBP eCLIP5.08□□□□□ -1.6
VPS13D-208ENST00000481484 GRIK5Q16478 980 aa5.08□□□□□ -1.6
VPS13D-208ENST00000481484 PTCRAQ6ISU1 281 aaPredicted RBP5.08□□□□□ -1.6
VPS13D-208ENST00000481484 PRRT2Q7Z6L0 340 aaPredicted RBP5.08□□□□□ -1.6
VPS13D-208ENST00000481484 ERC1Q8IUD2 1116 aa5.08□□□□□ -1.6
VPS13D-208ENST00000481484 FAM43AQ8N2R8 423 aa5.08□□□□□ -1.6
VPS13D-208ENST00000481484 PROCA1Q8NCQ7 364 aaPredicted RBP5.08□□□□□ -1.6
VPS13D-208ENST00000481484 PRR7Q8TB68 274 aa5.08□□□□□ -1.6
VPS13D-208ENST00000481484 GTF3C2Q8WUA4 911 aaPredicted RBP5.08□□□□□ -1.6
VPS13D-208ENST00000481484 XAGE2Q96GT9 111 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms