RNA–Protein interactions for RNA: ENST00000480943.5

VPS50-215, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 801 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-215ENST00000480943 OR13H1Q8NG92 308 aa8.48□□□□□ -1.05
VPS50-215ENST00000480943 PLD4Q96BZ4 506 aa8.48□□□□□ -1.05
VPS50-215ENST00000480943 COG3Q96JB2 828 aa8.48□□□□□ -1.05
VPS50-215ENST00000480943 ARID3AQ99856 593 aa8.48□□□□□ -1.05
VPS50-215ENST00000480943 CARD10Q9BWT7 1032 aa8.48□□□□□ -1.05
VPS50-215ENST00000480943 MTMR7Q9Y216 660 aa8.48□□□□□ -1.05
VPS50-215ENST00000480943 USTQ9Y2C2 406 aa8.48□□□□□ -1.05
VPS50-215ENST00000480943 FOSL1P15407 271 aa8.47□□□□□ -1.05
VPS50-215ENST00000480943 EZH2Q15910 746 aaKnown RBP8.47□□□□□ -1.05
VPS50-215ENST00000480943 NOM1Q5C9Z4 860 aaKnown RBP8.47□□□□□ -1.05
VPS50-215ENST00000480943 TTC39BQ5VTQ0 682 aaPredicted RBP8.47□□□□□ -1.05
VPS50-215ENST00000480943 GDF6Q6KF10 455 aaPredicted RBP8.47□□□□□ -1.05
VPS50-215ENST00000480943 ANKRD24Q8TF21 1146 aa8.47□□□□□ -1.05
VPS50-215ENST00000480943 NSD3Q9BZ95 1437 aa8.46□□□□□ -1.05
VPS50-215ENST00000480943 SART1O43290 800 aaKnown RBP8.46□□□□□ -1.06
VPS50-215ENST00000480943 PCSK2P16519 638 aa8.46□□□□□ -1.06
VPS50-215ENST00000480943 MPSTP25325 297 aa8.46□□□□□ -1.06
VPS50-215ENST00000480943 EDEM1Q92611 657 aa8.46□□□□□ -1.06
VPS50-215ENST00000480943 LTV1Q96GA3 475 aaPredicted RBP8.46□□□□□ -1.06
VPS50-215ENST00000480943 POLR3GLQ9BT43 218 aa8.46□□□□□ -1.06
VPS50-215ENST00000480943 GGNBP2Q9H3C7 697 aa8.46□□□□□ -1.06
VPS50-215ENST00000480943 NLRP2Q9NX02 1062 aa8.46□□□□□ -1.06
VPS50-215ENST00000480943 ABI2Q9NYB9 513 aaPredicted RBP8.46□□□□□ -1.06
VPS50-215ENST00000480943 HIF3AQ9Y2N7 669 aa8.46□□□□□ -1.06
VPS50-215ENST00000480943 RPLP1P05386 114 aaKnown RBP8.45□□□□□ -1.06
VPS50-215ENST00000480943 FBLN1P23142 703 aa8.45□□□□□ -1.06
VPS50-215ENST00000480943 DNM1Q05193 864 aaKnown RBP8.45□□□□□ -1.06
VPS50-215ENST00000480943 HYAL2Q12891 473 aa8.45□□□□□ -1.06
VPS50-215ENST00000480943 MTMR3Q13615 1198 aa8.45□□□□□ -1.06
VPS50-215ENST00000480943 PDE12Q6L8Q7 609 aaKnown RBP8.45□□□□□ -1.06
VPS50-215ENST00000480943 PHLDB3Q6NSJ2 640 aa8.45□□□□□ -1.06
VPS50-215ENST00000480943 ZNF438Q7Z4V0 828 aa8.45□□□□□ -1.06
VPS50-215ENST00000480943 MARCH10Q8NA82 808 aaPredicted RBP8.45□□□□□ -1.06
VPS50-215ENST00000480943 CAMKK2Q96RR4 588 aa8.45□□□□□ -1.06
VPS50-215ENST00000480943 MAP3K19Q56UN5 1328 aa8.45□□□□□ -1.06
VPS50-215ENST00000480943 RTL1A6NKG5 1358 aa8.45□□□□□ -1.06
VPS50-215ENST00000480943 PARD3Q8TEW0 1356 aa8.45□□□□□ -1.06
VPS50-215ENST00000480943 SRCAPQ6ZRS2 3230 aa8.44□□□□□ -1.06
VPS50-215ENST00000480943 PKD1L3Q7Z443 1732 aa8.44□□□□□ -1.06
VPS50-215ENST00000480943 CASZ1Q86V15 1759 aa8.44□□□□□ -1.06
VPS50-215ENST00000480943 EXOC5O00471 708 aa8.44□□□□□ -1.06
VPS50-215ENST00000480943 FYB1O15117 783 aa8.44□□□□□ -1.06
VPS50-215ENST00000480943 PAPLNO95428 1278 aa8.44□□□□□ -1.06
VPS50-215ENST00000480943 HSPA5P11021 654 aaKnown RBP8.44□□□□□ -1.06
VPS50-215ENST00000480943 EIF1AXP47813 144 aaKnown RBP8.44□□□□□ -1.06
VPS50-215ENST00000480943 AMPHP49418 695 aa8.44□□□□□ -1.06
VPS50-215ENST00000480943 B4GALNT3Q6L9W6 998 aa8.44□□□□□ -1.06
VPS50-215ENST00000480943 IP6K1Q92551 441 aa8.44□□□□□ -1.06
VPS50-215ENST00000480943 SPACA7Q96KW9 195 aa8.44□□□□□ -1.06
VPS50-215ENST00000480943 OSBPL1AQ9BXW6 950 aa8.44□□□□□ -1.06
VPS50-215ENST00000480943 KRTAP9-3Q9BYQ3 159 aa8.44□□□□□ -1.06
VPS50-215ENST00000480943 ELP3Q9H9T3 547 aa8.44□□□□□ -1.06
VPS50-215ENST00000480943 BSDC1Q9NW68 430 aaPredicted RBP8.44□□□□□ -1.06
VPS50-215ENST00000480943 ITGB4P16144 1822 aa8.44□□□□□ -1.06
VPS50-215ENST00000480943 TUBGCP6Q96RT7 1819 aa8.44□□□□□ -1.06
VPS50-215ENST00000480943 LY75O60449 1722 aa8.43□□□□□ -1.06
VPS50-215ENST00000480943 PDGFAP04085 211 aa8.43□□□□□ -1.06
VPS50-215ENST00000480943 BMP3P12645 472 aa8.43□□□□□ -1.06
VPS50-215ENST00000480943 IL2RBP14784 551 aa8.43□□□□□ -1.06
VPS50-215ENST00000480943 HOXC9P31274 260 aa8.43□□□□□ -1.06
VPS50-215ENST00000480943 R3HDM1Q15032 1099 aaKnown RBP8.43□□□□□ -1.06
VPS50-215ENST00000480943 RRS1Q15050 365 aaKnown RBP8.43□□□□□ -1.06
VPS50-215ENST00000480943 COL13A1Q5TAT6 717 aaPredicted RBP8.43□□□□□ -1.06
VPS50-215ENST00000480943 ALKBH2Q6NS38 261 aa8.43□□□□□ -1.06
VPS50-215ENST00000480943 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.43□□□□□ -1.06
VPS50-215ENST00000480943 TTC16Q8NEE8 873 aa8.43□□□□□ -1.06
VPS50-215ENST00000480943 TMEM63CQ9P1W3 806 aa8.43□□□□□ -1.06
VPS50-215ENST00000480943 BCL9O00512 1426 aa8.43□□□□□ -1.06
VPS50-215ENST00000480943 SMG6Q86US8 1419 aaKnown RBP8.43□□□□□ -1.06
VPS50-215ENST00000480943 VIRMAQ69YN4 1812 aaKnown RBP8.43□□□□□ -1.06
VPS50-215ENST00000480943 ABL1P00519 1130 aa8.42□□□□□ -1.06
VPS50-215ENST00000480943 MZF1P28698 734 aaPredicted RBP8.42□□□□□ -1.06
VPS50-215ENST00000480943 CD68P34810 354 aaPredicted RBP8.42□□□□□ -1.06
VPS50-215ENST00000480943 PTF1AQ7RTS3 328 aa8.42□□□□□ -1.06
VPS50-215ENST00000480943 FLCNQ8NFG4 579 aa8.42□□□□□ -1.06
VPS50-215ENST00000480943 MFSD14AQ96MC6 490 aa8.42□□□□□ -1.06
VPS50-215ENST00000480943 PPME1Q9Y570 386 aa8.42□□□□□ -1.06
VPS50-215ENST00000480943 MEGF6O75095 1541 aa8.42□□□□□ -1.06
VPS50-215ENST00000480943 TOGARAM1Q9Y4F4 1720 aa8.42□□□□□ -1.06
VPS50-215ENST00000480943 QSER1Q2KHR3 1735 aa8.41□□□□□ -1.06
VPS50-215ENST00000480943 PAPPAQ13219 1627 aa8.41□□□□□ -1.06
VPS50-215ENST00000480943 FLT4P35916 1363 aa8.41□□□□□ -1.06
VPS50-215ENST00000480943 FAM13AO94988 1023 aa8.41□□□□□ -1.06
VPS50-215ENST00000480943 AAMPQ13685 434 aa8.41□□□□□ -1.06
VPS50-215ENST00000480943 C8orf34Q49A92 452 aa8.41□□□□□ -1.06
VPS50-215ENST00000480943 BHLHE22Q8NFJ8 381 aaPredicted RBP8.41□□□□□ -1.06
VPS50-215ENST00000480943 METTL22Q9BUU2 404 aaPredicted RBP8.41□□□□□ -1.06
VPS50-215ENST00000480943 TRIM33Q9UPN9 1127 aa8.41□□□□□ -1.06
VPS50-215ENST00000480943 TAF1LQ8IZX4 1826 aa8.4□□□□□ -1.06
VPS50-215ENST00000480943 CGNL1Q0VF96 1302 aa8.4□□□□□ -1.06
VPS50-215ENST00000480943 KIF4AO95239 1232 aa8.4□□□□□ -1.06
VPS50-215ENST00000480943 CYP2E1P05181 493 aaPredicted RBP8.4□□□□□ -1.06
VPS50-215ENST00000480943 NPR3P17342 541 aa8.4□□□□□ -1.06
VPS50-215ENST00000480943 ATP11AP98196 1134 aa8.4□□□□□ -1.06
VPS50-215ENST00000480943 ZNF211Q13398 564 aaPredicted RBP8.4□□□□□ -1.06
VPS50-215ENST00000480943 NCAPG2Q86XI2 1143 aa8.4□□□□□ -1.06
VPS50-215ENST00000480943 USHBP1Q8N6Y0 703 aa8.4□□□□□ -1.06
VPS50-215ENST00000480943 ACSBG1Q96GR2 724 aa8.4□□□□□ -1.06
VPS50-215ENST00000480943 TOX2Q96NM4 488 aa8.4□□□□□ -1.06
VPS50-215ENST00000480943 POLIQ9UNA4 740 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms