RNA–Protein interactions for RNA: ENST00000480624.5

MACF1-217, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-217ENST00000480624 TROAPQ12815 778 aa13.23□□□□□ -0.29
MACF1-217ENST00000480624 NBPF12Q5TAG4 269 aaPredicted RBP13.23□□□□□ -0.29
MACF1-217ENST00000480624 SYNE3Q6ZMZ3 975 aa13.23□□□□□ -0.29
MACF1-217ENST00000480624 MIGA2Q7L4E1 593 aa13.23□□□□□ -0.29
MACF1-217ENST00000480624 NSUN7Q8NE18 718 aaKnown RBP13.23□□□□□ -0.29
MACF1-217ENST00000480624 SMARCC2Q8TAQ2 1214 aa13.23□□□□□ -0.29
MACF1-217ENST00000480624 TMEM47Q9BQJ4 181 aa13.23□□□□□ -0.29
MACF1-217ENST00000480624 LLPHQ9BRT6 129 aaKnown RBP13.23□□□□□ -0.29
MACF1-217ENST00000480624 TAF1DQ9H5J8 278 aaPredicted RBP13.23□□□□□ -0.29
MACF1-217ENST00000480624 GOLGA8AA7E2F4 631 aa13.22□□□□□ -0.29
MACF1-217ENST00000480624 PHF20L1A8MW92 1017 aa13.22□□□□□ -0.29
MACF1-217ENST00000480624 JAK2O60674 1132 aa13.22□□□□□ -0.29
MACF1-217ENST00000480624 DDAH1O94760 285 aa13.22□□□□□ -0.29
MACF1-217ENST00000480624 GDF11O95390 407 aa13.22□□□□□ -0.29
MACF1-217ENST00000480624 ABCB5Q2M3G0 1257 aa13.22□□□□□ -0.29
MACF1-217ENST00000480624 PRAMEF18Q5VWM3 479 aa13.22□□□□□ -0.29
MACF1-217ENST00000480624 CATIPQ7Z7H3 387 aa13.22□□□□□ -0.29
MACF1-217ENST00000480624 MICU3Q86XE3 530 aa13.22□□□□□ -0.29
MACF1-217ENST00000480624 CLEC10AQ8IUN9 316 aa13.22□□□□□ -0.29
MACF1-217ENST00000480624 SIAH1Q8IUQ4 282 aa13.22□□□□□ -0.29
MACF1-217ENST00000480624 CCDC144CPQ8IYA2 1237 aa13.22□□□□□ -0.29
MACF1-217ENST00000480624 FANCBQ8NB91 859 aa13.22□□□□□ -0.29
MACF1-217ENST00000480624 KAT14Q9H8E8 782 aa13.22□□□□□ -0.29
MACF1-217ENST00000480624 SMC3Q9UQE7 1217 aa13.22□□□□□ -0.29
MACF1-217ENST00000480624 PPP2R3BQ9Y5P8 575 aa13.22□□□□□ -0.29
MACF1-217ENST00000480624 WDR90Q96KV7 1748 aa13.22□□□□□ -0.29
MACF1-217ENST00000480624 GREB1LQ9C091 1923 aaPredicted RBP13.21□□□□□ -0.29
MACF1-217ENST00000480624 IQCA1LA6NCM1 817 aa13.21□□□□□ -0.29
MACF1-217ENST00000480624 MPHOSPH10O00566 681 aaKnown RBP13.21□□□□□ -0.29
MACF1-217ENST00000480624 TOP1P11387 765 aaKnown RBP13.21□□□□□ -0.29
MACF1-217ENST00000480624 GJB2P29033 226 aa13.21□□□□□ -0.29
MACF1-217ENST00000480624 SEPT2Q15019 361 aa13.21□□□□□ -0.29
MACF1-217ENST00000480624 NTRK3Q16288 839 aa13.21□□□□□ -0.29
MACF1-217ENST00000480624 IFFO2Q5TF58 517 aa13.21□□□□□ -0.29
MACF1-217ENST00000480624 TMEM179Q6ZVK1 233 aa13.21□□□□□ -0.29
MACF1-217ENST00000480624 PNMA1Q8ND90 353 aa13.21□□□□□ -0.29
MACF1-217ENST00000480624 ZC3H15Q8WU90 426 aaKnown RBP13.21□□□□□ -0.29
MACF1-217ENST00000480624 NUP133Q8WUM0 1156 aa13.21□□□□□ -0.29
MACF1-217ENST00000480624 DCPSQ96C86 337 aaKnown RBP13.21□□□□□ -0.29
MACF1-217ENST00000480624 CHMP4CQ96CF2 233 aa13.21□□□□□ -0.29
MACF1-217ENST00000480624 CHMP5Q9NZZ3 219 aa13.21□□□□□ -0.29
MACF1-217ENST00000480624 CIZ1Q9ULV3 898 aaPredicted RBP13.21□□□□□ -0.29
MACF1-217ENST00000480624 STX8Q9UNK0 236 aa13.21□□□□□ -0.29
MACF1-217ENST00000480624 PTPDC1A2A3K4 754 aa13.2□□□□□ -0.3
MACF1-217ENST00000480624 DHX16O60231 1041 aaKnown RBP13.2□□□□□ -0.3
MACF1-217ENST00000480624 GH2P01242 217 aa13.2□□□□□ -0.3
MACF1-217ENST00000480624 CALM1P0DP23 149 aa13.2□□□□□ -0.3
MACF1-217ENST00000480624 CALM2P0DP24 149 aa13.2□□□□□ -0.3
MACF1-217ENST00000480624 CALM3P0DP25 149 aa13.2□□□□□ -0.3
MACF1-217ENST00000480624 FDPSP14324 419 aaKnown RBP13.2□□□□□ -0.3
MACF1-217ENST00000480624 CAP2P40123 477 aa13.2□□□□□ -0.3
MACF1-217ENST00000480624 PPP2R5BQ15173 497 aa13.2□□□□□ -0.3
MACF1-217ENST00000480624 RTN1Q16799 776 aa13.2□□□□□ -0.3
MACF1-217ENST00000480624 DLK2Q6UY11 383 aa13.2□□□□□ -0.3
MACF1-217ENST00000480624 MKL1Q969V6 931 aa13.2□□□□□ -0.3
MACF1-217ENST00000480624 MAP3K14Q99558 947 aa13.2□□□□□ -0.3
MACF1-217ENST00000480624 KANSL2Q9H9L4 492 aa13.2□□□□□ -0.3
MACF1-217ENST00000480624 NYAP2Q9P242 653 aa13.2□□□□□ -0.3
MACF1-217ENST00000480624 CLIP2Q9UDT6 1046 aa13.2□□□□□ -0.3
MACF1-217ENST00000480624 ZNF112Q9UJU3 913 aa13.2□□□□□ -0.3
MACF1-217ENST00000480624 SCN4AP35499 1836 aa13.19□□□□□ -0.3
MACF1-217ENST00000480624 ADM5C9JUS6 153 aa13.19□□□□□ -0.3
MACF1-217ENST00000480624 TTLL1O95922 423 aa13.19□□□□□ -0.3
MACF1-217ENST00000480624 EEF2P13639 858 aaKnown RBP13.19□□□□□ -0.3
MACF1-217ENST00000480624 FUT2Q10981 343 aa13.19□□□□□ -0.3
MACF1-217ENST00000480624 GRM4Q14833 912 aa13.19□□□□□ -0.3
MACF1-217ENST00000480624 PPP4R3BQ5MIZ7 849 aa13.19□□□□□ -0.3
MACF1-217ENST00000480624 ZNF784Q8NCA9 323 aaPredicted RBP13.19□□□□□ -0.3
MACF1-217ENST00000480624 DDX11Q96FC9 970 aa13.19□□□□□ -0.3
MACF1-217ENST00000480624 CABP5Q9NP86 173 aa13.19□□□□□ -0.3
MACF1-217ENST00000480624 ZBTB21Q9ULJ3 1066 aa13.19□□□□□ -0.3
MACF1-217ENST00000480624 ZDHHC9Q9Y397 364 aa13.19□□□□□ -0.3
MACF1-217ENST00000480624 SSC5DA1L4H1 1573 aa13.19□□□□□ -0.3
MACF1-217ENST00000480624 CCDC196A0A1B0GTZ2 297 aa13.18□□□□□ -0.3
MACF1-217ENST00000480624 CPLX1O14810 134 aa13.18□□□□□ -0.3
MACF1-217ENST00000480624 PPFIA3O75145 1194 aa13.18□□□□□ -0.3
MACF1-217ENST00000480624 IFNAR1P17181 557 aa13.18□□□□□ -0.3
MACF1-217ENST00000480624 PKP1Q13835 747 aa13.18□□□□□ -0.3
MACF1-217ENST00000480624 SUPT20HL1Q3ZLR7 823 aa13.18□□□□□ -0.3
MACF1-217ENST00000480624 DCAF15Q66K64 600 aa13.18□□□□□ -0.3
MACF1-217ENST00000480624 NBPF11Q86T75 865 aa13.18□□□□□ -0.3
MACF1-217ENST00000480624 USP48Q86UV5 1035 aa13.18□□□□□ -0.3
MACF1-217ENST00000480624 PNMA8AQ86V59 439 aaPredicted RBP13.18□□□□□ -0.3
MACF1-217ENST00000480624 SULF1Q8IWU6 871 aa13.18□□□□□ -0.3
MACF1-217ENST00000480624 HOOK2Q96ED9 719 aa13.18□□□□□ -0.3
MACF1-217ENST00000480624 ZNF341Q9BYN7 854 aa13.18□□□□□ -0.3
MACF1-217ENST00000480624 MYH8P13535 1937 aa13.17□□□□□ -0.3
MACF1-217ENST00000480624 PALM3A6NDB9 673 aaPredicted RBP13.17□□□□□ -0.3
MACF1-217ENST00000480624 USP17L5A8MUK1 530 aa13.17□□□□□ -0.3
MACF1-217ENST00000480624 CTNND1O60716 968 aaKnown RBP13.17□□□□□ -0.3
MACF1-217ENST00000480624 PLEKHA8P1O95397 391 aa13.17□□□□□ -0.3
MACF1-217ENST00000480624 SNHG28P0DPA3 235 aa13.17□□□□□ -0.3
MACF1-217ENST00000480624 SYT1P21579 422 aa13.17□□□□□ -0.3
MACF1-217ENST00000480624 HMGN5P82970 282 aaKnown RBP13.17□□□□□ -0.3
MACF1-217ENST00000480624 ICA1Q05084 483 aa13.17□□□□□ -0.3
MACF1-217ENST00000480624 RAB3GAP1Q15042 981 aa13.17□□□□□ -0.3
MACF1-217ENST00000480624 EAPPQ56P03 285 aaPredicted RBP13.17□□□□□ -0.3
MACF1-217ENST00000480624 CPLX2Q6PUV4 134 aaKnown RBP13.17□□□□□ -0.3
MACF1-217ENST00000480624 TMTC3Q6ZXV5 915 aa13.17□□□□□ -0.3
MACF1-217ENST00000480624 RASGRP2Q7LDG7 609 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms