RNA–Protein interactions for RNA: ENST00000480609.1

COL4A2-206, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 2

Gene COL4A2, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-206ENST00000480609 HPS5Q9UPZ3 1129 aa15.44■□□□□ 0.06
COL4A2-206ENST00000480609 TTLL1O95922 423 aa15.43■□□□□ 0.06
COL4A2-206ENST00000480609 TOP1P11387 765 aaKnown RBP15.43■□□□□ 0.06
COL4A2-206ENST00000480609 RRP1BQ14684 758 aaKnown RBP15.43■□□□□ 0.06
COL4A2-206ENST00000480609 CEP95Q96GE4 821 aa15.43■□□□□ 0.06
COL4A2-206ENST00000480609 GPHNQ9NQX3 736 aaPredicted RBP15.43■□□□□ 0.06
COL4A2-206ENST00000480609 KLF18A0A0U1RQI7 1052 aa15.42■□□□□ 0.06
COL4A2-206ENST00000480609 CCDC69A6NI79 296 aa15.42■□□□□ 0.06
COL4A2-206ENST00000480609 SNHG28P0DPA3 235 aa15.42■□□□□ 0.06
COL4A2-206ENST00000480609 FKBP1BP68106 108 aa15.42■□□□□ 0.06
COL4A2-206ENST00000480609 APOBRQ0VD83 1088 aa15.42■□□□□ 0.06
COL4A2-206ENST00000480609 ZNF654Q8IZM8 581 aa15.42■□□□□ 0.06
COL4A2-206ENST00000480609 STK11IPQ8N1F8 1099 aa15.42■□□□□ 0.06
COL4A2-206ENST00000480609 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.42■□□□□ 0.06
COL4A2-206ENST00000480609 RRAGCQ9HB90 399 aa15.42■□□□□ 0.06
COL4A2-206ENST00000480609 ZBTB21Q9ULJ3 1066 aa15.42■□□□□ 0.06
COL4A2-206ENST00000480609 SLC12A7Q9Y666 1083 aa15.42■□□□□ 0.06
COL4A2-206ENST00000480609 PAPPA2Q9BXP8 1791 aa15.41■□□□□ 0.06
COL4A2-206ENST00000480609 CCDC196A0A1B0GTZ2 297 aa15.41■□□□□ 0.06
COL4A2-206ENST00000480609 ZBTB43O43298 467 aa15.41■□□□□ 0.06
COL4A2-206ENST00000480609 DHX16O60231 1041 aaKnown RBP15.41■□□□□ 0.06
COL4A2-206ENST00000480609 LARGE1O95461 756 aa15.41■□□□□ 0.06
COL4A2-206ENST00000480609 PDIA4P13667 645 aaKnown RBP15.41■□□□□ 0.06
COL4A2-206ENST00000480609 SMARCA1P28370 1054 aa15.41■□□□□ 0.06
COL4A2-206ENST00000480609 ST3GAL1Q11201 340 aa15.41■□□□□ 0.06
COL4A2-206ENST00000480609 SYNE3Q6ZMZ3 975 aa15.41■□□□□ 0.06
COL4A2-206ENST00000480609 CATIPQ7Z7H3 387 aa15.41■□□□□ 0.06
COL4A2-206ENST00000480609 SIAH1Q8IUQ4 282 aa15.41■□□□□ 0.06
COL4A2-206ENST00000480609 TMEM47Q9BQJ4 181 aa15.41■□□□□ 0.06
COL4A2-206ENST00000480609 ZKSCAN3Q9BRR0 538 aa15.41■□□□□ 0.06
COL4A2-206ENST00000480609 SLKQ9H2G2 1235 aaPredicted RBP15.41■□□□□ 0.06
COL4A2-206ENST00000480609 SENP2Q9HC62 589 aa15.41■□□□□ 0.06
COL4A2-206ENST00000480609 CWC22Q9HCG8 908 aaKnown RBP15.41■□□□□ 0.06
COL4A2-206ENST00000480609 FAM196BA6NMK8 535 aa15.4■□□□□ 0.06
COL4A2-206ENST00000480609 PPP1R12BO60237 982 aaPredicted RBP15.4■□□□□ 0.06
COL4A2-206ENST00000480609 NMT2O60551 498 aa15.4■□□□□ 0.06
COL4A2-206ENST00000480609 USP2O75604 605 aaPredicted RBP15.4■□□□□ 0.06
COL4A2-206ENST00000480609 GH2P01242 217 aa15.4■□□□□ 0.06
COL4A2-206ENST00000480609 SLURP2P0DP57 97 aa15.4■□□□□ 0.06
COL4A2-206ENST00000480609 NF2P35240 595 aa15.4■□□□□ 0.06
COL4A2-206ENST00000480609 DDIT3P35638 169 aa15.4■□□□□ 0.06
COL4A2-206ENST00000480609 JAG1P78504 1218 aa15.4■□□□□ 0.06
COL4A2-206ENST00000480609 SCRN1Q12765 414 aa15.4■□□□□ 0.06
COL4A2-206ENST00000480609 MIGA2Q7L4E1 593 aa15.4■□□□□ 0.06
COL4A2-206ENST00000480609 USP48Q86UV5 1035 aa15.4■□□□□ 0.06
COL4A2-206ENST00000480609 SCYL3Q8IZE3 742 aa15.4■□□□□ 0.06
COL4A2-206ENST00000480609 PNMA1Q8ND90 353 aa15.4■□□□□ 0.06
COL4A2-206ENST00000480609 GMCL1P1Q8NEA9 526 aa15.4■□□□□ 0.06
COL4A2-206ENST00000480609 SMARCC2Q8TAQ2 1214 aa15.4■□□□□ 0.06
COL4A2-206ENST00000480609 CDCA5Q96FF9 252 aa15.4■□□□□ 0.06
COL4A2-206ENST00000480609 WDR18Q9BV38 432 aa15.4■□□□□ 0.06
COL4A2-206ENST00000480609 KAT14Q9H8E8 782 aa15.4■□□□□ 0.06
COL4A2-206ENST00000480609 FAM217BQ9NTX9 383 aaPredicted RBP15.4■□□□□ 0.06
COL4A2-206ENST00000480609 RBM28Q9NW13 759 aaKnown RBP15.4■□□□□ 0.06
COL4A2-206ENST00000480609 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.4■□□□□ 0.06
COL4A2-206ENST00000480609 ADM5C9JUS6 153 aa15.39■□□□□ 0.05
COL4A2-206ENST00000480609 ICA1Q05084 483 aa15.39■□□□□ 0.05
COL4A2-206ENST00000480609 SEPT2Q15019 361 aa15.39■□□□□ 0.05
COL4A2-206ENST00000480609 NTRK3Q16288 839 aa15.39■□□□□ 0.05
COL4A2-206ENST00000480609 EAPPQ56P03 285 aaPredicted RBP15.39■□□□□ 0.05
COL4A2-206ENST00000480609 NFXL1Q6ZNB6 911 aa15.39■□□□□ 0.05
COL4A2-206ENST00000480609 FANCBQ8NB91 859 aa15.39■□□□□ 0.05
COL4A2-206ENST00000480609 NMRK2Q9NPI5 230 aa15.39■□□□□ 0.05
COL4A2-206ENST00000480609 TMX2Q9Y320 296 aa15.39■□□□□ 0.05
COL4A2-206ENST00000480609 GOLGA8BA8MQT2 603 aa15.38■□□□□ 0.05
COL4A2-206ENST00000480609 IFNAR1P17181 557 aa15.38■□□□□ 0.05
COL4A2-206ENST00000480609 IREB2P48200 963 aaKnown RBP15.38■□□□□ 0.05
COL4A2-206ENST00000480609 GNAQP50148 359 aa15.38■□□□□ 0.05
COL4A2-206ENST00000480609 METAP2P50579 478 aaKnown RBP eCLIP15.38■□□□□ 0.05
COL4A2-206ENST00000480609 MAP3K9P80192 1104 aa15.38■□□□□ 0.05
COL4A2-206ENST00000480609 GRM4Q14833 912 aa15.38■□□□□ 0.05
COL4A2-206ENST00000480609 LZTS2Q9BRK4 669 aa15.38■□□□□ 0.05
COL4A2-206ENST00000480609 GLIS2Q9BZE0 524 aaPredicted RBP15.38■□□□□ 0.05
COL4A2-206ENST00000480609 SH2D4AQ9H788 454 aa15.38■□□□□ 0.05
COL4A2-206ENST00000480609 STX8Q9UNK0 236 aa15.38■□□□□ 0.05
COL4A2-206ENST00000480609 DOCK1Q14185 1865 aa15.37■□□□□ 0.05
COL4A2-206ENST00000480609 PALM3A6NDB9 673 aaPredicted RBP15.37■□□□□ 0.05
COL4A2-206ENST00000480609 CDKL5O76039 1030 aa15.37■□□□□ 0.05
COL4A2-206ENST00000480609 GDF11O95390 407 aa15.37■□□□□ 0.05
COL4A2-206ENST00000480609 ITGBL1O95965 494 aaPredicted RBP15.37■□□□□ 0.05
COL4A2-206ENST00000480609 POTEIP0CG38 1075 aa15.37■□□□□ 0.05
COL4A2-206ENST00000480609 POTEJP0CG39 1038 aa15.37■□□□□ 0.05
COL4A2-206ENST00000480609 EEF2P13639 858 aaKnown RBP15.37■□□□□ 0.05
COL4A2-206ENST00000480609 KIF5BP33176 963 aa15.37■□□□□ 0.05
COL4A2-206ENST00000480609 HMGN5P82970 282 aaKnown RBP15.37■□□□□ 0.05
COL4A2-206ENST00000480609 LDLRAD1Q5T700 205 aa15.37■□□□□ 0.05
COL4A2-206ENST00000480609 CHADLQ6NUI6 762 aa15.37■□□□□ 0.05
COL4A2-206ENST00000480609 CPLX2Q6PUV4 134 aaKnown RBP15.37■□□□□ 0.05
COL4A2-206ENST00000480609 GMCL1Q96IK5 515 aa15.37■□□□□ 0.05
COL4A2-206ENST00000480609 WRNIP1Q96S55 665 aa15.37■□□□□ 0.05
COL4A2-206ENST00000480609 ARHGEF10LQ9HCE6 1279 aa15.37■□□□□ 0.05
COL4A2-206ENST00000480609 CIZ1Q9ULV3 898 aaPredicted RBP15.37■□□□□ 0.05
COL4A2-206ENST00000480609 SCAF8Q9UPN6 1271 aaKnown RBP15.37■□□□□ 0.05
COL4A2-206ENST00000480609 STK36Q9NRP7 1315 aa15.37■□□□□ 0.05
COL4A2-206ENST00000480609 GOLGA8AA7E2F4 631 aa15.36■□□□□ 0.05
COL4A2-206ENST00000480609 USP17L5A8MUK1 530 aa15.36■□□□□ 0.05
COL4A2-206ENST00000480609 MPHOSPH10O00566 681 aaKnown RBP15.36■□□□□ 0.05
COL4A2-206ENST00000480609 PLA2G6O60733 806 aa15.36■□□□□ 0.05
COL4A2-206ENST00000480609 CTDNEP1O95476 244 aa15.36■□□□□ 0.05
COL4A2-206ENST00000480609 PDHBP11177 359 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms