RNA–Protein interactions for RNA: ENST00000479899.5

CCDC58-205, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3 BASIC

Gene CCDC58, Length 545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-205ENST00000479899 A0A1B0GUL7 405 aa13.29□□□□□ -0.28
CCDC58-205ENST00000479899 TRIM32Q13049 653 aa13.29□□□□□ -0.28
CCDC58-205ENST00000479899 ALDH1L2Q3SY69 923 aa13.29□□□□□ -0.28
CCDC58-205ENST00000479899 PI16Q6UXB8 463 aa13.29□□□□□ -0.28
CCDC58-205ENST00000479899 XAGE2Q96GT9 111 aa13.29□□□□□ -0.28
CCDC58-205ENST00000479899 NEUROD6Q96NK8 337 aa13.29□□□□□ -0.28
CCDC58-205ENST00000479899 MEIS3Q99687 375 aa13.29□□□□□ -0.28
CCDC58-205ENST00000479899 NBPF3Q9H094 633 aa13.29□□□□□ -0.28
CCDC58-205ENST00000479899 MAST2Q6P0Q8 1798 aa13.28□□□□□ -0.28
CCDC58-205ENST00000479899 HMGCRP04035 888 aa13.28□□□□□ -0.28
CCDC58-205ENST00000479899 SYN1P17600 705 aa13.28□□□□□ -0.28
CCDC58-205ENST00000479899 RHBDL3P58872 404 aa13.28□□□□□ -0.28
CCDC58-205ENST00000479899 MAP3K10Q02779 954 aa13.28□□□□□ -0.28
CCDC58-205ENST00000479899 SLFN5Q08AF3 891 aa13.28□□□□□ -0.28
CCDC58-205ENST00000479899 TFCP2Q12800 502 aa13.28□□□□□ -0.28
CCDC58-205ENST00000479899 MVPQ14764 893 aaKnown RBP13.28□□□□□ -0.28
CCDC58-205ENST00000479899 ZNF280CQ8ND82 737 aa13.28□□□□□ -0.28
CCDC58-205ENST00000479899 RAI14Q9P0K7 980 aa13.28□□□□□ -0.28
CCDC58-205ENST00000479899 NOB1Q9ULX3 412 aaKnown RBP13.28□□□□□ -0.28
CCDC58-205ENST00000479899 DOCK3Q8IZD9 2030 aa13.28□□□□□ -0.28
CCDC58-205ENST00000479899 PLXNB2O15031 1838 aa13.27□□□□□ -0.28
CCDC58-205ENST00000479899 A0A1W2PPC1 479 aa13.27□□□□□ -0.29
CCDC58-205ENST00000479899 PABPC4Q13310 644 aaKnown RBP eCLIP13.27□□□□□ -0.295e-11■■■■□ 19.3
CCDC58-205ENST00000479899 RRP1BQ14684 758 aaKnown RBP13.27□□□□□ -0.29
CCDC58-205ENST00000479899 GORABQ5T7V8 394 aa13.27□□□□□ -0.29
CCDC58-205ENST00000479899 TBC1D9Q6ZT07 1266 aa13.27□□□□□ -0.29
CCDC58-205ENST00000479899 PROCA1Q8NCQ7 364 aaPredicted RBP13.27□□□□□ -0.29
CCDC58-205ENST00000479899 OSBPL5Q9H0X9 879 aaPredicted RBP13.27□□□□□ -0.29
CCDC58-205ENST00000479899 ASCC2Q9H1I8 757 aaPredicted RBP13.27□□□□□ -0.29
CCDC58-205ENST00000479899 COPRSQ9NQ92 184 aa13.27□□□□□ -0.29
CCDC58-205ENST00000479899 PDS5AQ29RF7 1337 aaKnown RBP13.27□□□□□ -0.29
CCDC58-205ENST00000479899 SIPA1L1O43166 1804 aa13.27□□□□□ -0.29
CCDC58-205ENST00000479899 GPR75-ASB3A0A0A6YYF3 556 aa13.26□□□□□ -0.29
CCDC58-205ENST00000479899 SRGAP3O43295 1099 aa13.26□□□□□ -0.29
CCDC58-205ENST00000479899 PEX10O60683 326 aa13.26□□□□□ -0.29
CCDC58-205ENST00000479899 CYP2B6P20813 491 aa13.26□□□□□ -0.29
CCDC58-205ENST00000479899 GCLCP48506 637 aaPredicted RBP13.26□□□□□ -0.29
CCDC58-205ENST00000479899 IRX3P78415 501 aaPredicted RBP13.26□□□□□ -0.29
CCDC58-205ENST00000479899 TEX11Q8IYF3 940 aa13.26□□□□□ -0.29
CCDC58-205ENST00000479899 ZNF384Q8TF68 577 aa13.26□□□□□ -0.29
CCDC58-205ENST00000479899 API5Q9BZZ5 524 aaKnown RBP13.26□□□□□ -0.29
CCDC58-205ENST00000479899 HMX1Q9NP08 348 aaPredicted RBP13.26□□□□□ -0.29
CCDC58-205ENST00000479899 HMG20BQ9P0W2 317 aa13.26□□□□□ -0.29
CCDC58-205ENST00000479899 AKAP2Q9Y2D5 859 aa13.26□□□□□ -0.29
CCDC58-205ENST00000479899 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.26□□□□□ -0.29
CCDC58-205ENST00000479899 A0A0C4DFX4 3053 aa13.25□□□□□ -0.29
CCDC58-205ENST00000479899 COL2A1P02458 1487 aaPredicted RBP13.25□□□□□ -0.29
CCDC58-205ENST00000479899 USP17L5A8MUK1 530 aa13.25□□□□□ -0.29
CCDC58-205ENST00000479899 LDHCP07864 332 aa13.25□□□□□ -0.29
CCDC58-205ENST00000479899 CAP2P40123 477 aa13.25□□□□□ -0.29
CCDC58-205ENST00000479899 GSTO1P78417 241 aa13.25□□□□□ -0.29
CCDC58-205ENST00000479899 MTMR2Q13614 643 aa13.25□□□□□ -0.29
CCDC58-205ENST00000479899 Q7L0L9 218 aa13.25□□□□□ -0.29
CCDC58-205ENST00000479899 SPATA5Q8NB90 893 aa13.25□□□□□ -0.29
CCDC58-205ENST00000479899 TRIB2Q92519 343 aa13.25□□□□□ -0.29
CCDC58-205ENST00000479899 NSUN4Q96CB9 384 aaKnown RBP13.25□□□□□ -0.29
CCDC58-205ENST00000479899 GDF15Q99988 308 aa13.25□□□□□ -0.29
CCDC58-205ENST00000479899 NOL10Q9BSC4 688 aaKnown RBP13.25□□□□□ -0.29
CCDC58-205ENST00000479899 C11orf49Q9H6J7 331 aa13.25□□□□□ -0.29
CCDC58-205ENST00000479899 AS3MTQ9HBK9 375 aa13.25□□□□□ -0.29
CCDC58-205ENST00000479899 HDAC5Q9UQL6 1122 aa13.25□□□□□ -0.29
CCDC58-205ENST00000479899 DNAH12Q6ZR08 3092 aa13.24□□□□□ -0.29
CCDC58-205ENST00000479899 RPTORQ8N122 1335 aa13.24□□□□□ -0.29
CCDC58-205ENST00000479899 LAPTM4BQ86VI4 370 aa13.24□□□□□ -0.29
CCDC58-205ENST00000479899 ANKLE1Q8NAG6 615 aa13.24□□□□□ -0.29
CCDC58-205ENST00000479899 SH3RF3Q8TEJ3 882 aaPredicted RBP13.24□□□□□ -0.29
CCDC58-205ENST00000479899 TRIM34Q9BYJ4 488 aa13.24□□□□□ -0.29
CCDC58-205ENST00000479899 AATFQ9NY61 560 aaKnown RBP eCLIP13.24□□□□□ -0.29
CCDC58-205ENST00000479899 TMOD4Q9NZQ9 345 aa13.24□□□□□ -0.29
CCDC58-205ENST00000479899 CDK5RAP2Q96SN8 1893 aa13.24□□□□□ -0.29
CCDC58-205ENST00000479899 GDF11O95390 407 aa13.23□□□□□ -0.29
CCDC58-205ENST00000479899 CAPN2P17655 700 aa13.23□□□□□ -0.29
CCDC58-205ENST00000479899 MAGEA10P43363 369 aaPredicted RBP13.23□□□□□ -0.29
CCDC58-205ENST00000479899 SHROOM1Q2M3G4 852 aaPredicted RBP13.23□□□□□ -0.29
CCDC58-205ENST00000479899 DEFB123Q8N688 67 aa13.23□□□□□ -0.29
CCDC58-205ENST00000479899 TATDN2Q93075 761 aa13.23□□□□□ -0.29
CCDC58-205ENST00000479899 PAGR1Q9BTK6 254 aa13.23□□□□□ -0.29
CCDC58-205ENST00000479899 TBC1D2Q9BYX2 928 aa13.23□□□□□ -0.29
CCDC58-205ENST00000479899 CWC22Q9HCG8 908 aaKnown RBP13.23□□□□□ -0.29
CCDC58-205ENST00000479899 LRP2BPQ9P2M1 347 aa13.23□□□□□ -0.29
CCDC58-205ENST00000479899 FRMPD3Q5JV73 1810 aa13.23□□□□□ -0.29
CCDC58-205ENST00000479899 ZKSCAN1P17029 563 aaPredicted RBP13.22□□□□□ -0.29
CCDC58-205ENST00000479899 FECHP22830 423 aa13.22□□□□□ -0.29
CCDC58-205ENST00000479899 MAPKAPK5Q8IW41 473 aa13.22□□□□□ -0.29
CCDC58-205ENST00000479899 CCAR1Q8IX12 1150 aaKnown RBP13.22□□□□□ -0.29
CCDC58-205ENST00000479899 CRACR2BQ8N4Y2 399 aaPredicted RBP13.22□□□□□ -0.29
CCDC58-205ENST00000479899 NUDT12Q9BQG2 462 aa13.22□□□□□ -0.29
CCDC58-205ENST00000479899 UBE2OQ9C0C9 1292 aaKnown RBP13.22□□□□□ -0.29
CCDC58-205ENST00000479899 SNRKQ9NRH2 765 aa13.22□□□□□ -0.29
CCDC58-205ENST00000479899 HERC5Q9UII4 1024 aaKnown RBP13.22□□□□□ -0.29
CCDC58-205ENST00000479899 GJD2Q9UKL4 321 aa13.22□□□□□ -0.29
CCDC58-205ENST00000479899 LAMA2P24043 3122 aaKnown RBP13.22□□□□□ -0.29
CCDC58-205ENST00000479899 FOCADQ5VW36 1801 aa13.22□□□□□ -0.29
CCDC58-205ENST00000479899 UNC80Q8N2C7 3258 aa13.21□□□□□ -0.29
CCDC58-205ENST00000479899 GNAI3P08754 354 aa13.21□□□□□ -0.29
CCDC58-205ENST00000479899 ARID4AP29374 1257 aaPredicted RBP13.21□□□□□ -0.29
CCDC58-205ENST00000479899 BMP8BP34820 402 aa13.21□□□□□ -0.29
CCDC58-205ENST00000479899 MCAMP43121 646 aa13.21□□□□□ -0.29
CCDC58-205ENST00000479899 HERVK_113P62684 666 aa13.21□□□□□ -0.29
CCDC58-205ENST00000479899 JAG1P78504 1218 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms