RNA–Protein interactions for RNA: ENST00000479653.5

CCDC18-208, Transcript of coiled-coil domain containing 18, humanhuman

TSL 3

Gene CCDC18, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-208ENST00000479653 TMEM31Q5JXX7 168 aa13.86□□□□□ -0.19
CCDC18-208ENST00000479653 C1orf53Q5VUE5 145 aa13.86□□□□□ -0.19
CCDC18-208ENST00000479653 SPTY2D1Q68D10 685 aaPredicted RBP13.86□□□□□ -0.19
CCDC18-208ENST00000479653 PBX4Q9BYU1 374 aa13.86□□□□□ -0.19
CCDC18-208ENST00000479653 CEP126Q9P2H0 1117 aa13.86□□□□□ -0.19
CCDC18-208ENST00000479653 HERC5Q9UII4 1024 aaKnown RBP13.86□□□□□ -0.19
CCDC18-208ENST00000479653 KIAA0355O15063 1070 aa13.85□□□□□ -0.19
CCDC18-208ENST00000479653 SEPT4O43236 478 aa13.85□□□□□ -0.19
CCDC18-208ENST00000479653 CNMDO75829 334 aa13.85□□□□□ -0.19
CCDC18-208ENST00000479653 HOXC6P09630 235 aa13.85□□□□□ -0.19
CCDC18-208ENST00000479653 JAG1P78504 1218 aa13.85□□□□□ -0.19
CCDC18-208ENST00000479653 MECOMQ03112 1051 aa13.85□□□□□ -0.19
CCDC18-208ENST00000479653 POLA2Q14181 598 aa13.85□□□□□ -0.19
CCDC18-208ENST00000479653 GRB14Q14449 540 aa13.85□□□□□ -0.19
CCDC18-208ENST00000479653 CCDC27Q2M243 656 aa13.85□□□□□ -0.19
CCDC18-208ENST00000479653 MICALL1Q8N3F8 863 aa13.85□□□□□ -0.19
CCDC18-208ENST00000479653 TRIM34Q9BYJ4 488 aa13.85□□□□□ -0.19
CCDC18-208ENST00000479653 SIL1Q9H173 461 aa13.85□□□□□ -0.19
CCDC18-208ENST00000479653 EMILIN3Q9NT22 766 aa13.85□□□□□ -0.19
CCDC18-208ENST00000479653 PI4KBQ9UBF8 816 aa13.85□□□□□ -0.19
CCDC18-208ENST00000479653 LOC285556D6RIA3 1793 aa13.85□□□□□ -0.19
CCDC18-208ENST00000479653 IL16Q14005 1332 aa13.85□□□□□ -0.19
CCDC18-208ENST00000479653 GDF11O95390 407 aa13.84□□□□□ -0.19
CCDC18-208ENST00000479653 TFF2Q03403 129 aa13.84□□□□□ -0.19
CCDC18-208ENST00000479653 ZYXQ15942 572 aaKnown RBP13.84□□□□□ -0.19
CCDC18-208ENST00000479653 SHROOM1Q2M3G4 852 aaPredicted RBP13.84□□□□□ -0.19
CCDC18-208ENST00000479653 PRAMEF19Q5SWL8 479 aa13.84□□□□□ -0.19
CCDC18-208ENST00000479653 CCDC102BQ68D86 513 aa13.84□□□□□ -0.19
CCDC18-208ENST00000479653 USP17L2Q6R6M4 530 aa13.84□□□□□ -0.19
CCDC18-208ENST00000479653 ERICH6Q7L0X2 663 aa13.84□□□□□ -0.19
CCDC18-208ENST00000479653 ATG9AQ7Z3C6 839 aa13.84□□□□□ -0.19
CCDC18-208ENST00000479653 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.84□□□□□ -0.19
CCDC18-208ENST00000479653 CXXC1Q9P0U4 656 aaPredicted RBP13.84□□□□□ -0.19
CCDC18-208ENST00000479653 USP17L15C9J2P7 530 aa13.83□□□□□ -0.2
CCDC18-208ENST00000479653 USP17L13C9JLJ4 530 aa13.83□□□□□ -0.2
CCDC18-208ENST00000479653 USP17L11C9JVI0 530 aa13.83□□□□□ -0.2
CCDC18-208ENST00000479653 USP17L18D6R9N7 530 aa13.83□□□□□ -0.2
CCDC18-208ENST00000479653 USP17L22D6RA61 530 aa13.83□□□□□ -0.2
CCDC18-208ENST00000479653 USP17L17D6RBQ6 530 aa13.83□□□□□ -0.2
CCDC18-208ENST00000479653 USP17L19D6RCP7 530 aa13.83□□□□□ -0.2
CCDC18-208ENST00000479653 USP17L20D6RJB6 530 aa13.83□□□□□ -0.2
CCDC18-208ENST00000479653 USP17L24Q0WX57 530 aa13.83□□□□□ -0.2
CCDC18-208ENST00000479653 RASGRF1Q13972 1273 aa13.83□□□□□ -0.2
CCDC18-208ENST00000479653 SKIV2LQ15477 1246 aaKnown RBP13.83□□□□□ -0.2
CCDC18-208ENST00000479653 AAK1Q2M2I8 961 aa13.83□□□□□ -0.2
CCDC18-208ENST00000479653 TEX11Q8IYF3 940 aa13.83□□□□□ -0.2
CCDC18-208ENST00000479653 CRACR2BQ8N4Y2 399 aaPredicted RBP13.83□□□□□ -0.2
CCDC18-208ENST00000479653 SLC44A5Q8NCS7 719 aa13.83□□□□□ -0.2
CCDC18-208ENST00000479653 SNX27Q96L92 541 aa13.83□□□□□ -0.2
CCDC18-208ENST00000479653 MSRAQ9UJ68 235 aa13.83□□□□□ -0.2
CCDC18-208ENST00000479653 LDHCP07864 332 aa13.82□□□□□ -0.2
CCDC18-208ENST00000479653 ADORA1P30542 326 aa13.82□□□□□ -0.2
CCDC18-208ENST00000479653 RFX5P48382 616 aaPredicted RBP13.82□□□□□ -0.2
CCDC18-208ENST00000479653 KCNQ1P51787 676 aa13.82□□□□□ -0.2
CCDC18-208ENST00000479653 GSTO1P78417 241 aa13.82□□□□□ -0.2
CCDC18-208ENST00000479653 FAM47AQ5JRC9 791 aa13.82□□□□□ -0.2
CCDC18-208ENST00000479653 FEZ1Q99689 392 aa13.82□□□□□ -0.2
CCDC18-208ENST00000479653 BTBD7Q9P203 1132 aa13.82□□□□□ -0.2
CCDC18-208ENST00000479653 PHF24Q9UPV7 400 aa13.82□□□□□ -0.2
CCDC18-208ENST00000479653 SALL2Q9Y467 1007 aaPredicted RBP13.82□□□□□ -0.2
CCDC18-208ENST00000479653 DCDC2CA8MYV0 355 aa13.81□□□□□ -0.2
CCDC18-208ENST00000479653 ANP32CO43423 234 aa13.81□□□□□ -0.2
CCDC18-208ENST00000479653 MAP4K4O95819 1239 aaPredicted RBP13.81□□□□□ -0.2
CCDC18-208ENST00000479653 ADORA2AP29274 412 aa13.81□□□□□ -0.2
CCDC18-208ENST00000479653 FAAP100Q0VG06 881 aa13.81□□□□□ -0.2
CCDC18-208ENST00000479653 OLFML2BQ68BL8 750 aa13.81□□□□□ -0.2
CCDC18-208ENST00000479653 CCDC174Q6PII3 467 aa13.81□□□□□ -0.2
CCDC18-208ENST00000479653 RNF180Q86T96 592 aa13.81□□□□□ -0.2
CCDC18-208ENST00000479653 DHX36Q9H2U1 1008 aaKnown RBP13.81□□□□□ -0.2
CCDC18-208ENST00000479653 SLC28A3Q9HAS3 691 aa13.81□□□□□ -0.2
CCDC18-208ENST00000479653 XPNPEP3Q9NQH7 507 aa13.81□□□□□ -0.2
CCDC18-208ENST00000479653 ZBTB21Q9ULJ3 1066 aa13.81□□□□□ -0.2
CCDC18-208ENST00000479653 CHD9Q3L8U1 2897 aa13.81□□□□□ -0.2
CCDC18-208ENST00000479653 FAM86C2PA6NEL3 165 aa13.8□□□□□ -0.2
CCDC18-208ENST00000479653 TIMP1P01033 207 aa13.8□□□□□ -0.2
CCDC18-208ENST00000479653 CATSPERGQ6ZRH7 1159 aa13.8□□□□□ -0.2
CCDC18-208ENST00000479653 FOXP4Q8IVH2 680 aaPredicted RBP13.8□□□□□ -0.2
CCDC18-208ENST00000479653 ZNF384Q8TF68 577 aa13.8□□□□□ -0.2
CCDC18-208ENST00000479653 NKX2-4Q9H2Z4 354 aa13.8□□□□□ -0.2
CCDC18-208ENST00000479653 FOXD4L1Q9NU39 408 aa13.8□□□□□ -0.2
CCDC18-208ENST00000479653 RAI14Q9P0K7 980 aa13.8□□□□□ -0.2
CCDC18-208ENST00000479653 MUC6Q6W4X9 2439 aa13.79□□□□□ -0.2
CCDC18-208ENST00000479653 A0A1W2PQ45 241 aaPredicted RBP13.79□□□□□ -0.2
CCDC18-208ENST00000479653 A0A1W2PQY0 241 aa13.79□□□□□ -0.2
CCDC18-208ENST00000479653 PGK1P00558 417 aa13.79□□□□□ -0.2
CCDC18-208ENST00000479653 IGHA2P01877 340 aa13.79□□□□□ -0.2
CCDC18-208ENST00000479653 RARBP10826 455 aa13.79□□□□□ -0.2
CCDC18-208ENST00000479653 TIMM10P62072 90 aa13.79□□□□□ -0.2
CCDC18-208ENST00000479653 PPIGQ13427 754 aaKnown RBP eCLIP13.79□□□□□ -0.2
CCDC18-208ENST00000479653 RAB30Q15771 203 aa13.79□□□□□ -0.2
CCDC18-208ENST00000479653 TMEM240Q5SV17 173 aa13.79□□□□□ -0.2
CCDC18-208ENST00000479653 C16orf59Q7L2K0 433 aa13.79□□□□□ -0.2
CCDC18-208ENST00000479653 SH3RF3Q8TEJ3 882 aaPredicted RBP13.79□□□□□ -0.2
CCDC18-208ENST00000479653 NOL10Q9BSC4 688 aaKnown RBP13.79□□□□□ -0.2
CCDC18-208ENST00000479653 USP44Q9H0E7 712 aa13.79□□□□□ -0.2
CCDC18-208ENST00000479653 GINM1Q9NU53 330 aa13.79□□□□□ -0.2
CCDC18-208ENST00000479653 SLC5A4Q9NY91 659 aa13.79□□□□□ -0.2
CCDC18-208ENST00000479653 APBB1O00213 710 aa13.78□□□□□ -0.2
CCDC18-208ENST00000479653 STRNO43815 780 aa13.78□□□□□ -0.2
CCDC18-208ENST00000479653 GPR37L1O60883 481 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms