RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 AAMPQ13685 434 aa17.73■□□□□ 0.43
USP11-207ENST00000478596 TRPV1Q8NER1 839 aa17.73■□□□□ 0.43
USP11-207ENST00000478596 FAM163AQ96GL9 167 aaPredicted RBP17.73■□□□□ 0.43
USP11-207ENST00000478596 NECAB3Q96P71 396 aaPredicted RBP17.73■□□□□ 0.43
USP11-207ENST00000478596 SRGAP3O43295 1099 aa17.72■□□□□ 0.43
USP11-207ENST00000478596 GLRX3O76003 335 aaKnown RBP17.72■□□□□ 0.43
USP11-207ENST00000478596 RRP1BQ14684 758 aaKnown RBP17.72■□□□□ 0.43
USP11-207ENST00000478596 CXXC1Q9P0U4 656 aaPredicted RBP17.72■□□□□ 0.43
USP11-207ENST00000478596 CHD9Q3L8U1 2897 aa17.72■□□□□ 0.43
USP11-207ENST00000478596 SLC15A5A6NIM6 579 aa17.71■□□□□ 0.43
USP11-207ENST00000478596 KIAA0355O15063 1070 aa17.71■□□□□ 0.43
USP11-207ENST00000478596 ZBTB22O15209 634 aa17.71■□□□□ 0.43
USP11-207ENST00000478596 CYBAP13498 195 aa17.71■□□□□ 0.43
USP11-207ENST00000478596 ATP2B2Q01814 1243 aa17.71■□□□□ 0.43
USP11-207ENST00000478596 TLE2Q04725 743 aa17.71■□□□□ 0.43
USP11-207ENST00000478596 SLF2Q8IX21 1173 aa17.71■□□□□ 0.43
USP11-207ENST00000478596 ANKRD44Q8N8A2 993 aa17.71■□□□□ 0.43
USP11-207ENST00000478596 PRDM12Q9H4Q4 367 aa17.71■□□□□ 0.43
USP11-207ENST00000478596 CWC22Q9HCG8 908 aaKnown RBP17.71■□□□□ 0.43
USP11-207ENST00000478596 GNL3LQ9NVN8 582 aaKnown RBP17.71■□□□□ 0.43
USP11-207ENST00000478596 C19orf81C9J6K1 198 aa17.7■□□□□ 0.42
USP11-207ENST00000478596 SEMA3EO15041 775 aa17.7■□□□□ 0.42
USP11-207ENST00000478596 CLTBP09497 229 aa17.7■□□□□ 0.42
USP11-207ENST00000478596 CYP2C19P33261 490 aa17.7■□□□□ 0.42
USP11-207ENST00000478596 FPGSQ05932 587 aa17.7■□□□□ 0.42
USP11-207ENST00000478596 OS9Q13438 667 aaPredicted RBP17.7■□□□□ 0.42
USP11-207ENST00000478596 ADGRE1Q14246 886 aa17.7■□□□□ 0.42
USP11-207ENST00000478596 TMEM31Q5JXX7 168 aa17.7■□□□□ 0.42
USP11-207ENST00000478596 CEP85Q6P2H3 762 aa17.7■□□□□ 0.42
USP11-207ENST00000478596 ZGPATQ8N5A5 531 aaKnown RBP17.7■□□□□ 0.42
USP11-207ENST00000478596 PAGR1Q9BTK6 254 aa17.7■□□□□ 0.42
USP11-207ENST00000478596 DENND2AQ9ULE3 1009 aa17.7■□□□□ 0.42
USP11-207ENST00000478596 PTPREP23469 700 aa17.69■□□□□ 0.42
USP11-207ENST00000478596 ADCYAP1R1P41586 468 aa17.69■□□□□ 0.42
USP11-207ENST00000478596 BTDP43251 543 aa17.69■□□□□ 0.42
USP11-207ENST00000478596 RHBDL3P58872 404 aa17.69■□□□□ 0.42
USP11-207ENST00000478596 CCNA1P78396 465 aa17.69■□□□□ 0.42
USP11-207ENST00000478596 CCDC85BQ15834 202 aaPredicted RBP17.69■□□□□ 0.42
USP11-207ENST00000478596 ALYREFQ86V81 257 aaKnown RBP17.69■□□□□ 0.42
USP11-207ENST00000478596 KLHDC4Q8TBB5 520 aa17.69■□□□□ 0.42
USP11-207ENST00000478596 TSPYL2Q9H2G4 693 aaPredicted RBP17.69■□□□□ 0.42
USP11-207ENST00000478596 EPHX3Q9H6B9 360 aa17.69■□□□□ 0.42
USP11-207ENST00000478596 RAG1P15918 1043 aa17.68■□□□□ 0.42
USP11-207ENST00000478596 GRB14Q14449 540 aa17.68■□□□□ 0.42
USP11-207ENST00000478596 DZIP1Q86YF9 867 aaKnown RBP17.68■□□□□ 0.42
USP11-207ENST00000478596 PBX4Q9BYU1 374 aa17.68■□□□□ 0.42
USP11-207ENST00000478596 HERC5Q9UII4 1024 aaKnown RBP17.68■□□□□ 0.42
USP11-207ENST00000478596 RABGAP1Q9Y3P9 1069 aa17.68■□□□□ 0.42
USP11-207ENST00000478596 MYH13Q9UKX3 1938 aa17.68■□□□□ 0.42
USP11-207ENST00000478596 MUC6Q6W4X9 2439 aa17.68■□□□□ 0.42
USP11-207ENST00000478596 GPR75-ASB3A0A0A6YYF3 556 aa17.67■□□□□ 0.42
USP11-207ENST00000478596 SEPT4O43236 478 aa17.67■□□□□ 0.42
USP11-207ENST00000478596 ASNSP08243 561 aa17.67■□□□□ 0.42
USP11-207ENST00000478596 AAK1Q2M2I8 961 aa17.67■□□□□ 0.42
USP11-207ENST00000478596 RPAP2Q8IXW5 612 aaPredicted RBP17.67■□□□□ 0.42
USP11-207ENST00000478596 NPLOC4Q8TAT6 608 aa17.67■□□□□ 0.42
USP11-207ENST00000478596 SIL1Q9H173 461 aa17.67■□□□□ 0.42
USP11-207ENST00000478596 MROH7-TTC4A0A0A0MT08 1334 aa17.67■□□□□ 0.42
USP11-207ENST00000478596 PNMA6EA0A0J9YXQ4 647 aa17.66■□□□□ 0.42
USP11-207ENST00000478596 USP17L10C9JJH3 530 aa17.66■□□□□ 0.42
USP11-207ENST00000478596 CNMDO75829 334 aa17.66■□□□□ 0.42
USP11-207ENST00000478596 MAP4K4O95819 1239 aaPredicted RBP17.66■□□□□ 0.42
USP11-207ENST00000478596 PBX2P40425 430 aa17.66■□□□□ 0.42
USP11-207ENST00000478596 LRRC41Q15345 812 aa17.66■□□□□ 0.42
USP11-207ENST00000478596 FERMT2Q96AC1 680 aa17.66■□□□□ 0.42
USP11-207ENST00000478596 NDUFB9Q9Y6M9 179 aa17.66■□□□□ 0.42
USP11-207ENST00000478596 EYA2O00167 538 aa17.65■□□□□ 0.42
USP11-207ENST00000478596 GPR37L1O60883 481 aa17.65■□□□□ 0.42
USP11-207ENST00000478596 IGFBP4P22692 258 aa17.65■□□□□ 0.42
USP11-207ENST00000478596 ATP8B2P98198 1209 aa17.65■□□□□ 0.42
USP11-207ENST00000478596 MTX1Q13505 466 aa17.65■□□□□ 0.42
USP11-207ENST00000478596 RASIP1Q5U651 963 aa17.65■□□□□ 0.42
USP11-207ENST00000478596 OLFML2BQ68BL8 750 aa17.65■□□□□ 0.42
USP11-207ENST00000478596 BCL11AQ9H165 835 aa17.65■□□□□ 0.42
USP11-207ENST00000478596 PHF24Q9UPV7 400 aa17.65■□□□□ 0.42
USP11-207ENST00000478596 IVNS1ABPQ9Y6Y0 642 aa17.65■□□□□ 0.42
USP11-207ENST00000478596 ATAD5Q96QE3 1844 aa17.64■□□□□ 0.41
USP11-207ENST00000478596 APBB1O00213 710 aa17.64■□□□□ 0.41
USP11-207ENST00000478596 CCDC136Q96JN2 1154 aa17.64■□□□□ 0.41
USP11-207ENST00000478596 RWDD1Q9H446 243 aaPredicted RBP17.64■□□□□ 0.41
USP11-207ENST00000478596 EMILIN3Q9NT22 766 aa17.64■□□□□ 0.41
USP11-207ENST00000478596 GINM1Q9NU53 330 aa17.64■□□□□ 0.41
USP11-207ENST00000478596 ZBTB47Q9UFB7 747 aaPredicted RBP17.64■□□□□ 0.41
USP11-207ENST00000478596 PCDHB15Q9Y5E8 787 aa17.64■□□□□ 0.41
USP11-207ENST00000478596 PDS5AQ29RF7 1337 aaKnown RBP17.64■□□□□ 0.41
USP11-207ENST00000478596 MYH2Q9UKX2 1941 aa17.64■□□□□ 0.41
USP11-207ENST00000478596 SURF6O75683 361 aaKnown RBP17.63■□□□□ 0.41
USP11-207ENST00000478596 MYCNP04198 464 aaPredicted RBP17.63■□□□□ 0.41
USP11-207ENST00000478596 PHKA1P46020 1223 aa17.63■□□□□ 0.41
USP11-207ENST00000478596 WDR78Q5VTH9 848 aa17.63■□□□□ 0.41
USP11-207ENST00000478596 ERICH6BQ5W0A0 696 aa17.63■□□□□ 0.41
USP11-207ENST00000478596 ANO1Q5XXA6 986 aa17.63■□□□□ 0.41
USP11-207ENST00000478596 CCDC129Q6ZRS4 1044 aa17.63■□□□□ 0.41
USP11-207ENST00000478596 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.63■□□□□ 0.414e-7■□□□□ 9
USP11-207ENST00000478596 C11orf16Q9NQ32 467 aa17.63■□□□□ 0.41
USP11-207ENST00000478596 TMEM39AQ9NV64 488 aa17.63■□□□□ 0.41
USP11-207ENST00000478596 PA2G4Q9UQ80 394 aaKnown RBP17.63■□□□□ 0.41
USP11-207ENST00000478596 JAG1P78504 1218 aa17.62■□□□□ 0.41
USP11-207ENST00000478596 TFF2Q03403 129 aa17.62■□□□□ 0.41
USP11-207ENST00000478596 G3BP1Q13283 466 aaKnown RBP eCLIP17.62■□□□□ 0.413e-6■■■□□ 15.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms