RNA–Protein interactions for RNA: ENST00000478563.1

CDK13-204, Transcript of cyclin dependent kinase 13, humanhuman

TSL 4

Gene CDK13, Length 700 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-204ENST00000478563 KRTAP4-11Q9BYQ6 195 aa8.7□□□□□ -1.02
CDK13-204ENST00000478563 TMEM260Q9NX78 707 aa8.7□□□□□ -1.02
CDK13-204ENST00000478563 CYP8B1Q9UNU6 501 aa8.7□□□□□ -1.02
CDK13-204ENST00000478563 WDR64B1ANS9 1081 aa8.69□□□□□ -1.02
CDK13-204ENST00000478563 IMPDH2P12268 514 aa8.69□□□□□ -1.02
CDK13-204ENST00000478563 HOXA10P31260 410 aaPredicted RBP8.69□□□□□ -1.02
CDK13-204ENST00000478563 LRRC14Q15048 493 aa8.69□□□□□ -1.02
CDK13-204ENST00000478563 ARSHQ5FYA8 562 aa8.69□□□□□ -1.02
CDK13-204ENST00000478563 LLGL2Q6P1M3 1020 aa8.69□□□□□ -1.02
CDK13-204ENST00000478563 RPUSD2Q8IZ73 545 aaKnown RBP8.69□□□□□ -1.02
CDK13-204ENST00000478563 FBLIM1Q8WUP2 373 aa8.69□□□□□ -1.02
CDK13-204ENST00000478563 GSX1Q9H4S2 264 aaPredicted RBP8.69□□□□□ -1.02
CDK13-204ENST00000478563 PFDN2Q9UHV9 154 aa8.69□□□□□ -1.02
CDK13-204ENST00000478563 GJB6O95452 261 aa8.68□□□□□ -1.02
CDK13-204ENST00000478563 CYP11A1P05108 521 aa8.68□□□□□ -1.02
CDK13-204ENST00000478563 GRIK1P39086 918 aa8.68□□□□□ -1.02
CDK13-204ENST00000478563 AMPD3Q01432 767 aa8.68□□□□□ -1.02
CDK13-204ENST00000478563 RUFY4Q6ZNE9 571 aa8.68□□□□□ -1.02
CDK13-204ENST00000478563 C16orf86Q6ZW13 317 aa8.68□□□□□ -1.02
CDK13-204ENST00000478563 RBBP8NLQ8NC74 664 aaPredicted RBP8.68□□□□□ -1.02
CDK13-204ENST00000478563 GATA6Q92908 595 aa8.68□□□□□ -1.02
CDK13-204ENST00000478563 PCDHB14Q9Y5E9 798 aa8.68□□□□□ -1.02
CDK13-204ENST00000478563 ACTL7BQ9Y614 415 aa8.68□□□□□ -1.02
CDK13-204ENST00000478563 FAM95CA0A1B0GW59 222 aa8.67□□□□□ -1.02
CDK13-204ENST00000478563 B2RBV5 119 aa8.67□□□□□ -1.02
CDK13-204ENST00000478563 GRIN3BO60391 1043 aa8.67□□□□□ -1.02
CDK13-204ENST00000478563 DDAH1O94760 285 aa8.67□□□□□ -1.02
CDK13-204ENST00000478563 ARNTP27540 789 aa8.67□□□□□ -1.02
CDK13-204ENST00000478563 CASP7P55210 303 aa8.67□□□□□ -1.02
CDK13-204ENST00000478563 TKFCQ3LXA3 575 aa8.67□□□□□ -1.02
CDK13-204ENST00000478563 C2orf27AQ580R0 203 aa8.67□□□□□ -1.02
CDK13-204ENST00000478563 GAL3ST3Q96A11 431 aa8.67□□□□□ -1.02
CDK13-204ENST00000478563 KDM2BQ8NHM5 1336 aa8.66□□□□□ -1.02
CDK13-204ENST00000478563 DIAPH1O60610 1272 aaKnown RBP8.66□□□□□ -1.02
CDK13-204ENST00000478563 PARNO95453 639 aaKnown RBP8.66□□□□□ -1.02
CDK13-204ENST00000478563 C8AP07357 584 aa8.66□□□□□ -1.02
CDK13-204ENST00000478563 RXRBP28702 533 aa8.66□□□□□ -1.02
CDK13-204ENST00000478563 ADMP35318 185 aa8.66□□□□□ -1.02
CDK13-204ENST00000478563 PTPN11Q06124 597 aaPredicted RBP8.66□□□□□ -1.02
CDK13-204ENST00000478563 PLEKHG6Q3KR16 790 aa8.66□□□□□ -1.02
CDK13-204ENST00000478563 TAF7LQ5H9L4 462 aa8.66□□□□□ -1.02
CDK13-204ENST00000478563 THAP3Q8WTV1 239 aaPredicted RBP8.66□□□□□ -1.02
CDK13-204ENST00000478563 FEZ1Q99689 392 aa8.66□□□□□ -1.02
CDK13-204ENST00000478563 EHMT1Q9H9B1 1298 aa8.66□□□□□ -1.02
CDK13-204ENST00000478563 DDX56Q9NY93 547 aaKnown RBP8.66□□□□□ -1.02
CDK13-204ENST00000478563 PIM2Q9P1W9 311 aa8.66□□□□□ -1.02
CDK13-204ENST00000478563 POLR3KQ9Y2Y1 108 aaPredicted RBP8.66□□□□□ -1.02
CDK13-204ENST00000478563 MASP1P48740 699 aa8.65□□□□□ -1.02
CDK13-204ENST00000478563 NFKBIBQ15653 356 aa8.65□□□□□ -1.02
CDK13-204ENST00000478563 SPATC1Q76KD6 591 aa8.65□□□□□ -1.02
CDK13-204ENST00000478563 TMX1Q9H3N1 280 aa8.65□□□□□ -1.02
CDK13-204ENST00000478563 ACSS3Q9H6R3 686 aa8.65□□□□□ -1.02
CDK13-204ENST00000478563 ANTXR1Q9H6X2 564 aa8.65□□□□□ -1.02
CDK13-204ENST00000478563 ARID4BQ4LE39 1312 aaPredicted RBP8.64□□□□□ -1.03
CDK13-204ENST00000478563 SYNGAP1Q96PV0 1343 aa8.64□□□□□ -1.03
CDK13-204ENST00000478563 USP11P51784 963 aa8.64□□□□□ -1.03
CDK13-204ENST00000478563 RPL6Q02878 288 aaKnown RBP8.64□□□□□ -1.03
CDK13-204ENST00000478563 MSMPQ1L6U9 139 aa8.64□□□□□ -1.03
CDK13-204ENST00000478563 PAOXQ6QHF9 649 aa8.64□□□□□ -1.03
CDK13-204ENST00000478563 C6orf15Q6UXA7 325 aaPredicted RBP8.64□□□□□ -1.03
CDK13-204ENST00000478563 SEZ6L2Q6UXD5 910 aa8.64□□□□□ -1.03
CDK13-204ENST00000478563 MPRIPQ6WCQ1 1025 aa8.64□□□□□ -1.03
CDK13-204ENST00000478563 ABI1Q8IZP0 508 aa8.64□□□□□ -1.03
CDK13-204ENST00000478563 WDR18Q9BV38 432 aa8.64□□□□□ -1.03
CDK13-204ENST00000478563 EMILIN2Q9BXX0 1053 aa8.64□□□□□ -1.03
CDK13-204ENST00000478563 FAM105AQ9NUU6 356 aa8.64□□□□□ -1.03
CDK13-204ENST00000478563 PTCH2Q9Y6C5 1203 aa8.64□□□□□ -1.03
CDK13-204ENST00000478563 A0A1W2PQH9 124 aa8.63□□□□□ -1.03
CDK13-204ENST00000478563 AOC2O75106 756 aa8.63□□□□□ -1.03
CDK13-204ENST00000478563 ASMTLO95671 621 aa8.63□□□□□ -1.03
CDK13-204ENST00000478563 SSRP1Q08945 709 aaKnown RBP8.63□□□□□ -1.03
CDK13-204ENST00000478563 CPSF6Q16630 551 aaKnown RBP eCLIP8.63□□□□□ -1.03
CDK13-204ENST00000478563 AKAP4Q5JQC9 854 aa8.63□□□□□ -1.03
CDK13-204ENST00000478563 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.63□□□□□ -1.03
CDK13-204ENST00000478563 ZAR1Q86SH2 424 aa8.63□□□□□ -1.03
CDK13-204ENST00000478563 TTC6Q86TZ1 520 aa8.63□□□□□ -1.03
CDK13-204ENST00000478563 FAM178BQ8IXR5 827 aa8.63□□□□□ -1.03
CDK13-204ENST00000478563 FBXL6Q8N531 539 aa8.63□□□□□ -1.03
CDK13-204ENST00000478563 STAG1Q8WVM7 1258 aa8.63□□□□□ -1.03
CDK13-204ENST00000478563 CORO1BQ9BR76 489 aa8.63□□□□□ -1.03
CDK13-204ENST00000478563 IRF2BPLQ9H1B7 796 aa8.63□□□□□ -1.03
CDK13-204ENST00000478563 SEMA6CQ9H3T2 930 aa8.63□□□□□ -1.03
CDK13-204ENST00000478563 ZMYM5Q9UJ78 669 aa8.63□□□□□ -1.03
CDK13-204ENST00000478563 ATE1O95260 518 aa8.62□□□□□ -1.03
CDK13-204ENST00000478563 HCLS1P14317 486 aaPredicted RBP8.62□□□□□ -1.03
CDK13-204ENST00000478563 FOSL1P15407 271 aa8.62□□□□□ -1.03
CDK13-204ENST00000478563 ZNF252P-AS1Q0IIN9 211 aa8.62□□□□□ -1.03
CDK13-204ENST00000478563 AP3B2Q13367 1082 aa8.62□□□□□ -1.03
CDK13-204ENST00000478563 HP1BP3Q5SSJ5 553 aaPredicted RBP8.62□□□□□ -1.03
CDK13-204ENST00000478563 NFXL1Q6ZNB6 911 aa8.62□□□□□ -1.03
CDK13-204ENST00000478563 C19orf47Q8N9M1 422 aaKnown RBP8.62□□□□□ -1.03
CDK13-204ENST00000478563 PPP1R9AQ9ULJ8 1098 aa8.62□□□□□ -1.03
CDK13-204ENST00000478563 G3BP2Q9UN86 482 aaKnown RBP8.62□□□□□ -1.03
CDK13-204ENST00000478563 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.61□□□□□ -1.03
CDK13-204ENST00000478563 NFICP08651 508 aa8.61□□□□□ -1.03
CDK13-204ENST00000478563 CDK8P49336 464 aa8.61□□□□□ -1.03
CDK13-204ENST00000478563 TCEA2Q15560 299 aa8.61□□□□□ -1.03
CDK13-204ENST00000478563 MAP1SQ66K74 1059 aaPredicted RBP8.61□□□□□ -1.03
CDK13-204ENST00000478563 MRM1Q6IN84 353 aaKnown RBP8.61□□□□□ -1.03
CDK13-204ENST00000478563 POU5F2Q8N7G0 328 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms