RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 C17orf53Q8N3J3 647 aaPredicted RBP15.94■□□□□ 0.14
NPHP4-208ENST00000478423 ERCC3P19447 782 aa15.94■□□□□ 0.14
NPHP4-208ENST00000478423 RAPGEF1Q13905 1077 aa15.94■□□□□ 0.14
NPHP4-208ENST00000478423 GAS2L3Q86XJ1 694 aa15.94■□□□□ 0.14
NPHP4-208ENST00000478423 PLVAPQ9BX97 442 aa15.94■□□□□ 0.14
NPHP4-208ENST00000478423 MCM6Q14566 821 aa15.94■□□□□ 0.14
NPHP4-208ENST00000478423 INF2Q27J81 1249 aa15.94■□□□□ 0.14
NPHP4-208ENST00000478423 GPKOWQ92917 476 aaPredicted RBP eCLIP15.94■□□□□ 0.14
NPHP4-208ENST00000478423 PCP11498 1178 aaKnown RBP15.94■□□□□ 0.14
NPHP4-208ENST00000478423 CMA1P23946 247 aa15.94■□□□□ 0.14
NPHP4-208ENST00000478423 GRM1Q13255 1194 aa15.94■□□□□ 0.14
NPHP4-208ENST00000478423 PRKG1Q13976 671 aa15.94■□□□□ 0.14
NPHP4-208ENST00000478423 HOOK3Q86VS8 718 aa15.94■□□□□ 0.14
NPHP4-208ENST00000478423 LCORLQ8N3X6 602 aa15.94■□□□□ 0.14
NPHP4-208ENST00000478423 QRICH2Q9H0J4 1663 aa15.93■□□□□ 0.14
NPHP4-208ENST00000478423 CETN3O15182 167 aa15.93■□□□□ 0.14
NPHP4-208ENST00000478423 LARGE1O95461 756 aa15.93■□□□□ 0.14
NPHP4-208ENST00000478423 CCDC122Q5T0U0 273 aa15.93■□□□□ 0.14
NPHP4-208ENST00000478423 CLIC6Q96NY7 704 aa15.93■□□□□ 0.14
NPHP4-208ENST00000478423 CTR9Q6PD62 1173 aa15.93■□□□□ 0.14
NPHP4-208ENST00000478423 FAM212AQ96EL1 285 aa15.93■□□□□ 0.14
NPHP4-208ENST00000478423 CNKSR1Q969H4 720 aa15.93■□□□□ 0.14
NPHP4-208ENST00000478423 RRAGDQ9NQL2 400 aaPredicted RBP15.93■□□□□ 0.14
NPHP4-208ENST00000478423 TAB2Q9NYJ8 693 aa15.93■□□□□ 0.14
NPHP4-208ENST00000478423 THRAP3Q9Y2W1 955 aaKnown RBP15.93■□□□□ 0.14
NPHP4-208ENST00000478423 PPRC1Q5VV67 1664 aaKnown RBP15.93■□□□□ 0.14
NPHP4-208ENST00000478423 KRT9P35527 623 aa15.92■□□□□ 0.14
NPHP4-208ENST00000478423 CAPZA3Q96KX2 299 aa15.92■□□□□ 0.14
NPHP4-208ENST00000478423 SYNCQ9H7C4 482 aa15.92■□□□□ 0.14
NPHP4-208ENST00000478423 HOMER2Q9NSB8 354 aa15.92■□□□□ 0.14
NPHP4-208ENST00000478423 GOLGA6L10A0A0M3HER8 536 aa15.92■□□□□ 0.14
NPHP4-208ENST00000478423 BBOX1O75936 387 aa15.92■□□□□ 0.14
NPHP4-208ENST00000478423 MYCLP12524 364 aaPredicted RBP15.92■□□□□ 0.14
NPHP4-208ENST00000478423 SLFNL1Q499Z3 407 aa15.92■□□□□ 0.14
NPHP4-208ENST00000478423 CEP112Q8N8E3 955 aa15.92■□□□□ 0.14
NPHP4-208ENST00000478423 PIH1D3Q9NQM4 214 aaKnown RBP15.92■□□□□ 0.14
NPHP4-208ENST00000478423 CLIC4Q9Y696 253 aa15.92■□□□□ 0.14
NPHP4-208ENST00000478423 FRMPD2Q68DX3 1309 aaPredicted RBP15.92■□□□□ 0.14
NPHP4-208ENST00000478423 LRRIQ1Q96JM4 1722 aa15.92■□□□□ 0.14
NPHP4-208ENST00000478423 CLEC4GQ6UXB4 293 aa15.92■□□□□ 0.14
NPHP4-208ENST00000478423 MAATS1Q7Z4T9 603 aa15.92■□□□□ 0.14
NPHP4-208ENST00000478423 DNM3Q9UQ16 869 aa15.92■□□□□ 0.14
NPHP4-208ENST00000478423 ARHGEF35A5YM69 484 aa15.92■□□□□ 0.14
NPHP4-208ENST00000478423 MCAMP43121 646 aa15.92■□□□□ 0.14
NPHP4-208ENST00000478423 FNBP4Q8N3X1 1017 aaPredicted RBP15.92■□□□□ 0.14
NPHP4-208ENST00000478423 SELENOOQ9BVL4 669 aa15.92■□□□□ 0.14
NPHP4-208ENST00000478423 XPO4Q9C0E2 1151 aaKnown RBP15.92■□□□□ 0.14
NPHP4-208ENST00000478423 ZSWIM5Q9P217 1185 aa15.92■□□□□ 0.14
NPHP4-208ENST00000478423 FRMD4BQ9Y2L6 1034 aa15.92■□□□□ 0.14
NPHP4-208ENST00000478423 PTPRMP28827 1452 aa15.91■□□□□ 0.14
NPHP4-208ENST00000478423 ZNF827Q17R98 1081 aa15.91■□□□□ 0.14
NPHP4-208ENST00000478423 RGS22Q8NE09 1264 aa15.91■□□□□ 0.14
NPHP4-208ENST00000478423 TMOD4Q9NZQ9 345 aa15.91■□□□□ 0.14
NPHP4-208ENST00000478423 DDX39AO00148 427 aaKnown RBP15.91■□□□□ 0.14
NPHP4-208ENST00000478423 DDAH1O94760 285 aa15.91■□□□□ 0.14
NPHP4-208ENST00000478423 NDUFA8P51970 172 aa15.91■□□□□ 0.14
NPHP4-208ENST00000478423 TBC1D7Q9P0N9 293 aa15.91■□□□□ 0.14
NPHP4-208ENST00000478423 ATP10DQ9P241 1426 aa15.91■□□□□ 0.14
NPHP4-208ENST00000478423 CERKLQ49MI3 558 aaPredicted RBP15.91■□□□□ 0.14
NPHP4-208ENST00000478423 KIFC2Q96AC6 838 aa15.91■□□□□ 0.14
NPHP4-208ENST00000478423 CARMIL3Q8ND23 1372 aa15.9■□□□□ 0.14
NPHP4-208ENST00000478423 SHTN1A0MZ66 631 aa15.9■□□□□ 0.14
NPHP4-208ENST00000478423 EPB41P11171 864 aaKnown RBP15.9■□□□□ 0.14
NPHP4-208ENST00000478423 PTGDRQ13258 359 aa15.9■□□□□ 0.14
NPHP4-208ENST00000478423 MAEAQ7L5Y9 396 aa15.9■□□□□ 0.14
NPHP4-208ENST00000478423 SEPT12Q8IYM1 358 aa15.9■□□□□ 0.14
NPHP4-208ENST00000478423 DIP2CQ9Y2E4 1556 aa15.9■□□□□ 0.14
NPHP4-208ENST00000478423 TNS3Q68CZ2 1445 aa15.9■□□□□ 0.14
NPHP4-208ENST00000478423 CCDC169A6NNP5 214 aa15.9■□□□□ 0.14
NPHP4-208ENST00000478423 NBPF26B4DH59 902 aa15.9■□□□□ 0.14
NPHP4-208ENST00000478423 NBPF10Q6P3W6 841 aaKnown RBP15.9■□□□□ 0.14
NPHP4-208ENST00000478423 KRT27Q7Z3Y8 459 aa15.9■□□□□ 0.14
NPHP4-208ENST00000478423 NBPF15Q8N660 670 aa15.9■□□□□ 0.14
NPHP4-208ENST00000478423 GOLGA1Q92805 767 aa15.9■□□□□ 0.14
NPHP4-208ENST00000478423 GPHNQ9NQX3 736 aaPredicted RBP15.9■□□□□ 0.14
NPHP4-208ENST00000478423 DIXDC1Q155Q3 683 aa15.9■□□□□ 0.14
NPHP4-208ENST00000478423 CHURC1Q8WUH1 139 aa15.9■□□□□ 0.14
NPHP4-208ENST00000478423 RNF26Q9BY78 433 aaPredicted RBP15.9■□□□□ 0.14
NPHP4-208ENST00000478423 PSTPIP2Q9H939 334 aa15.9■□□□□ 0.14
NPHP4-208ENST00000478423 BCS1LQ9Y276 419 aa15.9■□□□□ 0.14
NPHP4-208ENST00000478423 GOLGA6L7A0A1B0GV03 622 aa15.9■□□□□ 0.14
NPHP4-208ENST00000478423 NELFCDQ8IXH7 590 aa15.9■□□□□ 0.14
NPHP4-208ENST00000478423 LMBR1Q8WVP7 490 aa15.9■□□□□ 0.14
NPHP4-208ENST00000478423 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.9■□□□□ 0.14
NPHP4-208ENST00000478423 RTEL1Q9NZ71 1219 aa15.9■□□□□ 0.14
NPHP4-208ENST00000478423 CYP2D7A0A087X1C5 515 aa15.89■□□□□ 0.13
NPHP4-208ENST00000478423 ICA1Q05084 483 aa15.89■□□□□ 0.13
NPHP4-208ENST00000478423 NELFBQ8WX92 580 aa15.89■□□□□ 0.13
NPHP4-208ENST00000478423 TRIM14Q14142 442 aa15.89■□□□□ 0.13
NPHP4-208ENST00000478423 SLC39A14Q15043 492 aa15.89■□□□□ 0.13
NPHP4-208ENST00000478423 PPP1R9BQ96SB3 815 aa15.89■□□□□ 0.13
NPHP4-208ENST00000478423 FTOQ9C0B1 505 aaKnown RBP eCLIP15.89■□□□□ 0.13
NPHP4-208ENST00000478423 IMPACTQ9P2X3 320 aa15.89■□□□□ 0.13
NPHP4-208ENST00000478423 TCP10L2B9ZVM9 353 aa15.89■□□□□ 0.13
NPHP4-208ENST00000478423 RPS6KA4O75676 772 aa15.89■□□□□ 0.13
NPHP4-208ENST00000478423 PPEF1O14829 653 aaPredicted RBP15.88■□□□□ 0.13
NPHP4-208ENST00000478423 HARSP12081 509 aaKnown RBP15.88■□□□□ 0.13
NPHP4-208ENST00000478423 ACTN2P35609 894 aa15.88■□□□□ 0.13
NPHP4-208ENST00000478423 TECP42680 631 aa15.88■□□□□ 0.13
NPHP4-208ENST00000478423 ZRSR2Q15696 482 aaKnown RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms