RNA–Protein interactions for RNA: ENST00000478359.5

TRAF3IP3-213, Transcript of TRAF3 interacting protein 3, humanhuman

TSL 1 (best)

Gene TRAF3IP3, Length 1,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP3-213ENST00000478359 RESP18Q5W5W9 173 aa14.35□□□□□ -0.11
TRAF3IP3-213ENST00000478359 TEX11Q8IYF3 940 aa14.35□□□□□ -0.11
TRAF3IP3-213ENST00000478359 ZNF579Q8NAF0 562 aaKnown RBP14.35□□□□□ -0.11
TRAF3IP3-213ENST00000478359 LZTS2Q9BRK4 669 aa14.35□□□□□ -0.11
TRAF3IP3-213ENST00000478359 DNAJC25Q9H1X3 360 aa14.35□□□□□ -0.11
TRAF3IP3-213ENST00000478359 QSER1Q2KHR3 1735 aa14.34□□□□□ -0.11
TRAF3IP3-213ENST00000478359 CDK5RAP2Q96SN8 1893 aa14.34□□□□□ -0.11
TRAF3IP3-213ENST00000478359 CNTNAP5Q8WYK1 1306 aa14.34□□□□□ -0.11
TRAF3IP3-213ENST00000478359 FOCADQ5VW36 1801 aa14.34□□□□□ -0.11
TRAF3IP3-213ENST00000478359 CYP2D6P10635 497 aa14.34□□□□□ -0.11
TRAF3IP3-213ENST00000478359 PLCB2Q00722 1185 aa14.34□□□□□ -0.11
TRAF3IP3-213ENST00000478359 PKN1Q16512 942 aa14.34□□□□□ -0.11
TRAF3IP3-213ENST00000478359 FAM47AQ5JRC9 791 aa14.34□□□□□ -0.11
TRAF3IP3-213ENST00000478359 LUZP1Q86V48 1076 aa14.34□□□□□ -0.11
TRAF3IP3-213ENST00000478359 CCDC34Q96HJ3 373 aa14.34□□□□□ -0.11
TRAF3IP3-213ENST00000478359 BPIFA3Q9BQP9 254 aa14.34□□□□□ -0.11
TRAF3IP3-213ENST00000478359 SH3GLB2Q9NR46 395 aa14.34□□□□□ -0.11
TRAF3IP3-213ENST00000478359 FAM13BQ9NYF5 915 aa14.34□□□□□ -0.11
TRAF3IP3-213ENST00000478359 KCNJ14Q9UNX9 436 aa14.34□□□□□ -0.11
TRAF3IP3-213ENST00000478359 V9GY48 417 aaPredicted RBP14.34□□□□□ -0.11
TRAF3IP3-213ENST00000478359 BECN2A8MW95 431 aa14.33□□□□□ -0.11
TRAF3IP3-213ENST00000478359 SMIM22K7EJ46 135 aa14.33□□□□□ -0.11
TRAF3IP3-213ENST00000478359 WDHD1O75717 1129 aaPredicted RBP14.33□□□□□ -0.11
TRAF3IP3-213ENST00000478359 CALML3P27482 149 aa14.33□□□□□ -0.11
TRAF3IP3-213ENST00000478359 MARCKSP29966 332 aaPredicted RBP14.33□□□□□ -0.11
TRAF3IP3-213ENST00000478359 RCSD1Q6JBY9 416 aa14.33□□□□□ -0.11
TRAF3IP3-213ENST00000478359 DPP8Q6V1X1 898 aaPredicted RBP14.33□□□□□ -0.11
TRAF3IP3-213ENST00000478359 C16orf86Q6ZW13 317 aa14.33□□□□□ -0.11
TRAF3IP3-213ENST00000478359 PNMA1Q8ND90 353 aa14.33□□□□□ -0.11
TRAF3IP3-213ENST00000478359 GPR101Q96P66 508 aaPredicted RBP14.33□□□□□ -0.11
TRAF3IP3-213ENST00000478359 PLEKHA8P1O95397 391 aa14.33□□□□□ -0.12
TRAF3IP3-213ENST00000478359 SCG2P13521 617 aa14.33□□□□□ -0.12
TRAF3IP3-213ENST00000478359 TRAPPC10P48553 1259 aa14.33□□□□□ -0.12
TRAF3IP3-213ENST00000478359 KIAA2012Q0VF49 1180 aa14.33□□□□□ -0.12
TRAF3IP3-213ENST00000478359 PFKFB3Q16875 520 aaPredicted RBP14.33□□□□□ -0.12
TRAF3IP3-213ENST00000478359 SARM1Q6SZW1 724 aa14.33□□□□□ -0.12
TRAF3IP3-213ENST00000478359 CMTR1Q8N1G2 835 aaKnown RBP14.33□□□□□ -0.12
TRAF3IP3-213ENST00000478359 TNS1Q9HBL0 1735 aaKnown RBP14.32□□□□□ -0.12
TRAF3IP3-213ENST00000478359 FLT1P17948 1338 aa14.32□□□□□ -0.12
TRAF3IP3-213ENST00000478359 MMP10P09238 476 aa14.32□□□□□ -0.12
TRAF3IP3-213ENST00000478359 PTPREP23469 700 aa14.32□□□□□ -0.12
TRAF3IP3-213ENST00000478359 KANK3Q6NY19 840 aa14.32□□□□□ -0.12
TRAF3IP3-213ENST00000478359 MAPKAPK5Q8IW41 473 aa14.32□□□□□ -0.12
TRAF3IP3-213ENST00000478359 TAOK2Q9UL54 1235 aa14.32□□□□□ -0.12
TRAF3IP3-213ENST00000478359 SRPRBQ9Y5M8 271 aaKnown RBP14.32□□□□□ -0.12
TRAF3IP3-213ENST00000478359 TRIM75PA6NK02 468 aa14.31□□□□□ -0.12
TRAF3IP3-213ENST00000478359 G3V3G9 751 aa14.31□□□□□ -0.12
TRAF3IP3-213ENST00000478359 UBE2Q2LH0YL09 131 aa14.31□□□□□ -0.12
TRAF3IP3-213ENST00000478359 TOB1P50616 345 aaPredicted RBP14.31□□□□□ -0.12
TRAF3IP3-213ENST00000478359 RHBDL3P58872 404 aa14.31□□□□□ -0.12
TRAF3IP3-213ENST00000478359 TPM4P67936 248 aa14.31□□□□□ -0.12
TRAF3IP3-213ENST00000478359 GTF2IP78347 998 aa14.31□□□□□ -0.12
TRAF3IP3-213ENST00000478359 GRM4Q14833 912 aa14.31□□□□□ -0.12
TRAF3IP3-213ENST00000478359 IQCB1Q15051 598 aa14.31□□□□□ -0.12
TRAF3IP3-213ENST00000478359 GRIK5Q16478 980 aa14.31□□□□□ -0.12
TRAF3IP3-213ENST00000478359 DCAF8Q5TAQ9 597 aa14.31□□□□□ -0.12
TRAF3IP3-213ENST00000478359 GALNT17Q6IS24 598 aa14.31□□□□□ -0.12
TRAF3IP3-213ENST00000478359 SHC4Q6S5L8 630 aa14.31□□□□□ -0.12
TRAF3IP3-213ENST00000478359 PODNQ7Z5L7 613 aa14.31□□□□□ -0.12
TRAF3IP3-213ENST00000478359 SRBD1Q8N5C6 995 aaKnown RBP14.31□□□□□ -0.12
TRAF3IP3-213ENST00000478359 IL17RBQ9NRM6 502 aa14.31□□□□□ -0.12
TRAF3IP3-213ENST00000478359 VPS54Q9P1Q0 977 aa14.31□□□□□ -0.12
TRAF3IP3-213ENST00000478359 MYH1P12882 1939 aa14.31□□□□□ -0.12
TRAF3IP3-213ENST00000478359 NMT2O60551 498 aa14.31□□□□□ -0.12
TRAF3IP3-213ENST00000478359 RASA1P20936 1047 aa14.31□□□□□ -0.12
TRAF3IP3-213ENST00000478359 SMARCA1P28370 1054 aa14.31□□□□□ -0.12
TRAF3IP3-213ENST00000478359 CDC25BP30305 580 aa14.31□□□□□ -0.12
TRAF3IP3-213ENST00000478359 FKBP1AP62942 108 aaKnown RBP14.31□□□□□ -0.12
TRAF3IP3-213ENST00000478359 NR5A1Q13285 461 aa14.31□□□□□ -0.12
TRAF3IP3-213ENST00000478359 STYK1Q6J9G0 422 aa14.31□□□□□ -0.12
TRAF3IP3-213ENST00000478359 CCDC148Q8NFR7 591 aa14.31□□□□□ -0.12
TRAF3IP3-213ENST00000478359 NEDD1Q8NHV4 660 aa14.31□□□□□ -0.12
TRAF3IP3-213ENST00000478359 FERMT2Q96AC1 680 aa14.31□□□□□ -0.12
TRAF3IP3-213ENST00000478359 CABP5Q9NP86 173 aa14.31□□□□□ -0.12
TRAF3IP3-213ENST00000478359 KCNH3Q9ULD8 1083 aa14.31□□□□□ -0.12
TRAF3IP3-213ENST00000478359 MYO3BQ8WXR4 1341 aa14.3□□□□□ -0.12
TRAF3IP3-213ENST00000478359 CDK8P49336 464 aa14.3□□□□□ -0.12
TRAF3IP3-213ENST00000478359 PLCD1P51178 756 aa14.3□□□□□ -0.12
TRAF3IP3-213ENST00000478359 NLRP12P59046 1061 aa14.3□□□□□ -0.12
TRAF3IP3-213ENST00000478359 PPP4R3BQ5MIZ7 849 aa14.3□□□□□ -0.12
TRAF3IP3-213ENST00000478359 HHIPL2Q6UWX4 724 aa14.3□□□□□ -0.12
TRAF3IP3-213ENST00000478359 DYNLL2Q96FJ2 89 aa14.3□□□□□ -0.12
TRAF3IP3-213ENST00000478359 MRIQ9BWK5 157 aa14.3□□□□□ -0.12
TRAF3IP3-213ENST00000478359 TRIM5Q9C035 493 aa14.3□□□□□ -0.12
TRAF3IP3-213ENST00000478359 TUBE1Q9UJT0 475 aa14.3□□□□□ -0.12
TRAF3IP3-213ENST00000478359 FBXO2Q9UK22 296 aaPredicted RBP14.3□□□□□ -0.12
TRAF3IP3-213ENST00000478359 DAGLAQ9Y4D2 1042 aa14.3□□□□□ -0.12
TRAF3IP3-213ENST00000478359 COL11A2P13942 1736 aaPredicted RBP14.3□□□□□ -0.12
TRAF3IP3-213ENST00000478359 PLIN4Q96Q06 1357 aa14.29□□□□□ -0.12
TRAF3IP3-213ENST00000478359 SMTNL1A8MU46 457 aa14.29□□□□□ -0.12
TRAF3IP3-213ENST00000478359 H0YIN7 160 aa14.29□□□□□ -0.12
TRAF3IP3-213ENST00000478359 PLA2G4DQ86XP0 818 aa14.29□□□□□ -0.12
TRAF3IP3-213ENST00000478359 PYM1Q9BRP8 204 aaKnown RBP14.29□□□□□ -0.12
TRAF3IP3-213ENST00000478359 SWAP70Q9UH65 585 aa14.29□□□□□ -0.12
TRAF3IP3-213ENST00000478359 EP400Q96L91 3159 aa14.29□□□□□ -0.12
TRAF3IP3-213ENST00000478359 RIMBP2O15034 1052 aa14.29□□□□□ -0.12
TRAF3IP3-213ENST00000478359 NLRP5P59047 1200 aa14.29□□□□□ -0.12
TRAF3IP3-213ENST00000478359 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.29□□□□□ -0.12
TRAF3IP3-213ENST00000478359 KRBA2Q6ZNG9 492 aa14.29□□□□□ -0.12
TRAF3IP3-213ENST00000478359 SLC51AQ86UW1 340 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms