RNA–Protein interactions for RNA: ENST00000477546.5

TRAIP-206, Transcript of TRAF interacting protein, humanhuman

TSL 2

Gene TRAIP, Length 1,175 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-206ENST00000477546 UIMC1Q96RL1 719 aa12.95□□□□□ -0.34
TRAIP-206ENST00000477546 WDR18Q9BV38 432 aa12.95□□□□□ -0.34
TRAIP-206ENST00000477546 DDX4Q9NQI0 724 aaKnown RBP12.95□□□□□ -0.34
TRAIP-206ENST00000477546 LRRC37A2A6NM11 1700 aa12.95□□□□□ -0.34
TRAIP-206ENST00000477546 PLXNA1Q9UIW2 1896 aa12.95□□□□□ -0.34
TRAIP-206ENST00000477546 CHD7Q9P2D1 2997 aa12.94□□□□□ -0.34
TRAIP-206ENST00000477546 FAM196BA6NMK8 535 aa12.94□□□□□ -0.34
TRAIP-206ENST00000477546 ST18O60284 1047 aa12.94□□□□□ -0.34
TRAIP-206ENST00000477546 PDE8BO95263 885 aa12.94□□□□□ -0.34
TRAIP-206ENST00000477546 TIMP1P01033 207 aa12.94□□□□□ -0.34
TRAIP-206ENST00000477546 FAAP100Q0VG06 881 aa12.94□□□□□ -0.34
TRAIP-206ENST00000477546 OLFML2BQ68BL8 750 aa12.94□□□□□ -0.34
TRAIP-206ENST00000477546 MFSD5Q6N075 450 aa12.94□□□□□ -0.34
TRAIP-206ENST00000477546 C16orf59Q7L2K0 433 aa12.94□□□□□ -0.34
TRAIP-206ENST00000477546 ANKRD33Q7Z3H0 272 aa12.94□□□□□ -0.34
TRAIP-206ENST00000477546 TOX2Q96NM4 488 aa12.94□□□□□ -0.34
TRAIP-206ENST00000477546 RABGAP1Q9Y3P9 1069 aa12.94□□□□□ -0.34
TRAIP-206ENST00000477546 NDUFB9Q9Y6M9 179 aa12.94□□□□□ -0.34
TRAIP-206ENST00000477546 IVNS1ABPQ9Y6Y0 642 aa12.94□□□□□ -0.34
TRAIP-206ENST00000477546 GAKO14976 1311 aa12.93□□□□□ -0.34
TRAIP-206ENST00000477546 GRM8O00222 908 aa12.93□□□□□ -0.34
TRAIP-206ENST00000477546 IFIT1P09914 478 aaKnown RBP12.93□□□□□ -0.34
TRAIP-206ENST00000477546 POU3F3P20264 500 aaPredicted RBP12.93□□□□□ -0.34
TRAIP-206ENST00000477546 PICALMQ13492 652 aa12.93□□□□□ -0.34
TRAIP-206ENST00000477546 FAM47AQ5JRC9 791 aa12.93□□□□□ -0.34
TRAIP-206ENST00000477546 WDR78Q5VTH9 848 aa12.93□□□□□ -0.34
TRAIP-206ENST00000477546 PSRC1Q6PGN9 363 aaPredicted RBP12.93□□□□□ -0.34
TRAIP-206ENST00000477546 CD320Q9NPF0 282 aa12.93□□□□□ -0.34
TRAIP-206ENST00000477546 YBX2Q9Y2T7 364 aaKnown RBP12.93□□□□□ -0.34
TRAIP-206ENST00000477546 REV3LO60673 3130 aa12.92□□□□□ -0.34
TRAIP-206ENST00000477546 DCDC2CA8MYV0 355 aa12.92□□□□□ -0.34
TRAIP-206ENST00000477546 C19orf81C9J6K1 198 aa12.92□□□□□ -0.34
TRAIP-206ENST00000477546 F6X3S4 739 aa12.92□□□□□ -0.34
TRAIP-206ENST00000477546 HNRNPUQ00839 825 aaKnown RBP eCLIP12.92□□□□□ -0.34
TRAIP-206ENST00000477546 PUM3Q15397 648 aaKnown RBP12.92□□□□□ -0.34
TRAIP-206ENST00000477546 HLA-CQ95604 372 aa12.92□□□□□ -0.34
TRAIP-206ENST00000477546 TBX21Q9UL17 535 aa12.92□□□□□ -0.34
TRAIP-206ENST00000477546 SALL1Q9NSC2 1324 aa12.91□□□□□ -0.34
TRAIP-206ENST00000477546 A0A1W2PQ45 241 aaPredicted RBP12.91□□□□□ -0.34
TRAIP-206ENST00000477546 A0A1W2PQY0 241 aa12.91□□□□□ -0.34
TRAIP-206ENST00000477546 GTPBP6O43824 516 aaPredicted RBP12.91□□□□□ -0.34
TRAIP-206ENST00000477546 NPM3O75607 178 aaKnown RBP12.91□□□□□ -0.34
TRAIP-206ENST00000477546 CNMDO75829 334 aa12.91□□□□□ -0.34
TRAIP-206ENST00000477546 FGFR2P21802 821 aa12.91□□□□□ -0.34
TRAIP-206ENST00000477546 RRP1BQ14684 758 aaKnown RBP12.91□□□□□ -0.34
TRAIP-206ENST00000477546 CSPP1Q1MSJ5 1256 aa12.91□□□□□ -0.34
TRAIP-206ENST00000477546 LRRC24Q50LG9 513 aa12.91□□□□□ -0.34
TRAIP-206ENST00000477546 BEND3Q5T5X7 828 aa12.91□□□□□ -0.34
TRAIP-206ENST00000477546 PPP2R2DQ66LE6 453 aa12.91□□□□□ -0.34
TRAIP-206ENST00000477546 MTIF3Q9H2K0 278 aaKnown RBP12.91□□□□□ -0.34
TRAIP-206ENST00000477546 MTCH2Q9Y6C9 303 aa12.91□□□□□ -0.34
TRAIP-206ENST00000477546 ALADP13716 330 aa12.9□□□□□ -0.34
TRAIP-206ENST00000477546 SLC5A1P13866 664 aa12.9□□□□□ -0.34
TRAIP-206ENST00000477546 CSF2RAP15509 400 aa12.9□□□□□ -0.34
TRAIP-206ENST00000477546 SLC4A10Q6U841 1118 aa12.9□□□□□ -0.34
TRAIP-206ENST00000477546 ZNF365Q70YC5 407 aa12.9□□□□□ -0.34
TRAIP-206ENST00000477546 SMC4Q9NTJ3 1288 aa12.9□□□□□ -0.34
TRAIP-206ENST00000477546 USP17L10C9JJH3 530 aa12.89□□□□□ -0.35
TRAIP-206ENST00000477546 ASNSP08243 561 aa12.89□□□□□ -0.35
TRAIP-206ENST00000477546 RNF180Q86T96 592 aa12.89□□□□□ -0.35
TRAIP-206ENST00000477546 DPP9Q86TI2 863 aa12.89□□□□□ -0.35
TRAIP-206ENST00000477546 TRMT2AQ8IZ69 625 aaKnown RBP12.89□□□□□ -0.35
TRAIP-206ENST00000477546 TMEM199Q8N511 208 aa12.89□□□□□ -0.35
TRAIP-206ENST00000477546 MRPL50Q8N5N7 158 aaKnown RBP12.89□□□□□ -0.35
TRAIP-206ENST00000477546 SSH1Q8WYL5 1049 aa12.89□□□□□ -0.35
TRAIP-206ENST00000477546 XPNPEP3Q9NQH7 507 aa12.89□□□□□ -0.35
TRAIP-206ENST00000477546 ZDBF2Q9HCK1 2354 aa12.89□□□□□ -0.35
TRAIP-206ENST00000477546 PRRC2BQ5JSZ5 2229 aaKnown RBP12.89□□□□□ -0.35
TRAIP-206ENST00000477546 ACRP10323 421 aa12.88□□□□□ -0.35
TRAIP-206ENST00000477546 RARBP10826 455 aa12.88□□□□□ -0.35
TRAIP-206ENST00000477546 BTDP43251 543 aa12.88□□□□□ -0.35
TRAIP-206ENST00000477546 SLF2Q8IX21 1173 aa12.88□□□□□ -0.35
TRAIP-206ENST00000477546 GJD3Q8N144 294 aa12.88□□□□□ -0.35
TRAIP-206ENST00000477546 FAM163AQ96GL9 167 aaPredicted RBP12.88□□□□□ -0.35
TRAIP-206ENST00000477546 C9orf78Q9NZ63 289 aaPredicted RBP12.88□□□□□ -0.35
TRAIP-206ENST00000477546 HERC5Q9UII4 1024 aaKnown RBP12.88□□□□□ -0.35
TRAIP-206ENST00000477546 PTPRCP08575 1304 aa12.88□□□□□ -0.35
TRAIP-206ENST00000477546 CT47B1P0C2W7 299 aaPredicted RBP12.87□□□□□ -0.35
TRAIP-206ENST00000477546 ADORA2AP29274 412 aa12.87□□□□□ -0.35
TRAIP-206ENST00000477546 ALDH1L2Q3SY69 923 aa12.87□□□□□ -0.35
TRAIP-206ENST00000477546 DZIP1Q86YF9 867 aaKnown RBP12.87□□□□□ -0.35
TRAIP-206ENST00000477546 ZGPATQ8N5A5 531 aaKnown RBP12.87□□□□□ -0.35
TRAIP-206ENST00000477546 LPIN2Q92539 896 aa12.87□□□□□ -0.35
TRAIP-206ENST00000477546 PHOX2BQ99453 314 aa12.87□□□□□ -0.35
TRAIP-206ENST00000477546 SRCIN1Q9C0H9 1055 aa12.87□□□□□ -0.35
TRAIP-206ENST00000477546 STARD7Q9NQZ5 370 aa12.87□□□□□ -0.35
TRAIP-206ENST00000477546 PCDHA11Q9Y5I1 949 aa12.87□□□□□ -0.35
TRAIP-206ENST00000477546 ATAD5Q96QE3 1844 aa12.87□□□□□ -0.35
TRAIP-206ENST00000477546 MROH7Q68CQ1 1323 aa12.87□□□□□ -0.35
TRAIP-206ENST00000477546 APBB1O00213 710 aa12.86□□□□□ -0.35
TRAIP-206ENST00000477546 STRNO43815 780 aa12.86□□□□□ -0.35
TRAIP-206ENST00000477546 PGK1P00558 417 aa12.86□□□□□ -0.35
TRAIP-206ENST00000477546 RHBDL3P58872 404 aa12.86□□□□□ -0.35
TRAIP-206ENST00000477546 PRAMEF19Q5SWL8 479 aa12.86□□□□□ -0.35
TRAIP-206ENST00000477546 USP17L2Q6R6M4 530 aa12.86□□□□□ -0.35
TRAIP-206ENST00000477546 LBX2Q6XYB7 198 aa12.86□□□□□ -0.35
TRAIP-206ENST00000477546 NUP133Q8WUM0 1156 aa12.86□□□□□ -0.35
TRAIP-206ENST00000477546 KAZALD1Q96I82 304 aa12.86□□□□□ -0.35
TRAIP-206ENST00000477546 SUCLG2Q96I99 432 aa12.86□□□□□ -0.35
TRAIP-206ENST00000477546 TSEN34Q9BSV6 310 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms