RNA–Protein interactions for RNA: ENST00000477438.1

PARVB-206, Transcript of parvin beta, humanhuman

TSL 5

Gene PARVB, Length 421 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-206ENST00000477438 ZNF444Q8N0Y2 327 aaPredicted RBP12.57□□□□□ -0.4
PARVB-206ENST00000477438 SH2D4AQ9H788 454 aa12.57□□□□□ -0.4
PARVB-206ENST00000477438 EPB41L4AQ9HCS5 686 aaPredicted RBP12.57□□□□□ -0.4
PARVB-206ENST00000477438 TMOD4Q9NZQ9 345 aa12.57□□□□□ -0.4
PARVB-206ENST00000477438 ZBTB21Q9ULJ3 1066 aa12.57□□□□□ -0.4
PARVB-206ENST00000477438 ATP6V1DQ9Y5K8 247 aa12.57□□□□□ -0.4
PARVB-206ENST00000477438 THSD7BQ9C0I4 1608 aa12.57□□□□□ -0.4
PARVB-206ENST00000477438 CEP350Q5VT06 3117 aa12.57□□□□□ -0.4
PARVB-206ENST00000477438 ATAD5Q96QE3 1844 aa12.56□□□□□ -0.4
PARVB-206ENST00000477438 ZNF213O14771 459 aa12.56□□□□□ -0.4
PARVB-206ENST00000477438 BRD1O95696 1058 aa12.56□□□□□ -0.4
PARVB-206ENST00000477438 ALDH1A1P00352 501 aa12.56□□□□□ -0.4
PARVB-206ENST00000477438 GH2P01242 217 aa12.56□□□□□ -0.4
PARVB-206ENST00000477438 HSPD1P10809 573 aaKnown RBP12.56□□□□□ -0.4
PARVB-206ENST00000477438 PTPRAP18433 802 aa12.56□□□□□ -0.4
PARVB-206ENST00000477438 ATP2B2Q01814 1243 aa12.56□□□□□ -0.4
PARVB-206ENST00000477438 MAP3K10Q02779 954 aa12.56□□□□□ -0.4
PARVB-206ENST00000477438 IMMTQ16891 758 aaKnown RBP12.56□□□□□ -0.4
PARVB-206ENST00000477438 GADL1Q6ZQY3 521 aa12.56□□□□□ -0.4
PARVB-206ENST00000477438 TMEM179Q6ZVK1 233 aa12.56□□□□□ -0.4
PARVB-206ENST00000477438 RUFY3Q7L099 469 aa12.56□□□□□ -0.4
PARVB-206ENST00000477438 DNAJC5GQ8N7S2 189 aa12.56□□□□□ -0.4
PARVB-206ENST00000477438 DYNLL2Q96FJ2 89 aa12.56□□□□□ -0.4
PARVB-206ENST00000477438 CCDC17Q96LX7 622 aa12.56□□□□□ -0.4
PARVB-206ENST00000477438 RNF41Q9H4P4 317 aaPredicted RBP12.56□□□□□ -0.4
PARVB-206ENST00000477438 ARHGEF10LQ9HCE6 1279 aa12.56□□□□□ -0.4
PARVB-206ENST00000477438 U3KPZ7 1027 aaPredicted RBP12.56□□□□□ -0.4
PARVB-206ENST00000477438 ZMYM6O95789 1325 aa12.56□□□□□ -0.4
PARVB-206ENST00000477438 ROBO3Q96MS0 1386 aa12.56□□□□□ -0.4
PARVB-206ENST00000477438 IRF6O14896 467 aa12.55□□□□□ -0.4
PARVB-206ENST00000477438 RAD21O60216 631 aa12.55□□□□□ -0.4
PARVB-206ENST00000477438 MBD3O95983 291 aa12.55□□□□□ -0.4
PARVB-206ENST00000477438 TSPY3P0CV98 308 aa12.55□□□□□ -0.4
PARVB-206ENST00000477438 TSPY8P0CW00 308 aa12.55□□□□□ -0.4
PARVB-206ENST00000477438 CDK8P49336 464 aa12.55□□□□□ -0.4
PARVB-206ENST00000477438 PABPC4Q13310 644 aaKnown RBP eCLIP12.55□□□□□ -0.42e-12■■□□□ 11.8
PARVB-206ENST00000477438 RRP12Q5JTH9 1297 aaKnown RBP12.55□□□□□ -0.4
PARVB-206ENST00000477438 PPP4R3BQ5MIZ7 849 aa12.55□□□□□ -0.4
PARVB-206ENST00000477438 CREB3L3Q68CJ9 461 aa12.55□□□□□ -0.4
PARVB-206ENST00000477438 TATDN1Q6P1N9 297 aa12.55□□□□□ -0.4
PARVB-206ENST00000477438 FASTKD5Q7L8L6 764 aaKnown RBP12.55□□□□□ -0.4
PARVB-206ENST00000477438 METTL16Q86W50 562 aaKnown RBP12.55□□□□□ -0.4
PARVB-206ENST00000477438 SLC44A5Q8NCS7 719 aa12.55□□□□□ -0.4
PARVB-206ENST00000477438 ZNF280CQ8ND82 737 aa12.55□□□□□ -0.4
PARVB-206ENST00000477438 CNKSR2Q8WXI2 1034 aa12.55□□□□□ -0.4
PARVB-206ENST00000477438 DSCC1Q9BVC3 393 aa12.55□□□□□ -0.4
PARVB-206ENST00000477438 DNAJC18Q9H819 358 aa12.55□□□□□ -0.4
PARVB-206ENST00000477438 PDRG1Q9NUG6 133 aa12.55□□□□□ -0.4
PARVB-206ENST00000477438 RBM8AQ9Y5S9 174 aaKnown RBP12.55□□□□□ -0.4
PARVB-206ENST00000477438 DDX49Q9Y6V7 483 aaKnown RBP12.55□□□□□ -0.4
PARVB-206ENST00000477438 SIPA1L1O43166 1804 aa12.55□□□□□ -0.4
PARVB-206ENST00000477438 TSPY2A6NKD2 308 aa12.54□□□□□ -0.4
PARVB-206ENST00000477438 CXCL11O14625 94 aa12.54□□□□□ -0.4
PARVB-206ENST00000477438 HMGB1P09429 215 aaKnown RBP12.54□□□□□ -0.4
PARVB-206ENST00000477438 HSPA1AP0DMV8 641 aaKnown RBP12.54□□□□□ -0.4
PARVB-206ENST00000477438 HSPA1BP0DMV9 641 aaKnown RBP12.54□□□□□ -0.4
PARVB-206ENST00000477438 CASTP20810 708 aaKnown RBP12.54□□□□□ -0.4
PARVB-206ENST00000477438 SHMT1P34896 483 aa12.54□□□□□ -0.4
PARVB-206ENST00000477438 USP14P54578 494 aa12.54□□□□□ -0.4
PARVB-206ENST00000477438 PTH1RQ03431 593 aa12.54□□□□□ -0.4
PARVB-206ENST00000477438 ICA1Q05084 483 aa12.54□□□□□ -0.4
PARVB-206ENST00000477438 ALX1Q15699 326 aa12.54□□□□□ -0.4
PARVB-206ENST00000477438 CSPP1Q1MSJ5 1256 aa12.54□□□□□ -0.4
PARVB-206ENST00000477438 JMYQ8N9B5 988 aa12.54□□□□□ -0.4
PARVB-206ENST00000477438 RANBP6O60518 1105 aaKnown RBP12.53□□□□□ -0.4
PARVB-206ENST00000477438 PRDM1O75626 825 aa12.53□□□□□ -0.4
PARVB-206ENST00000477438 FGAP02671 866 aa12.53□□□□□ -0.4
PARVB-206ENST00000477438 SLURP2P0DP57 97 aa12.53□□□□□ -0.4
PARVB-206ENST00000477438 PCP11498 1178 aaKnown RBP12.53□□□□□ -0.4
PARVB-206ENST00000477438 NCLP19338 710 aaKnown RBP12.53□□□□□ -0.4
PARVB-206ENST00000477438 AK2P54819 239 aa12.53□□□□□ -0.4
PARVB-206ENST00000477438 HAND2P61296 217 aa12.53□□□□□ -0.4
PARVB-206ENST00000477438 CTDSPL2Q05D32 466 aa12.53□□□□□ -0.4
PARVB-206ENST00000477438 GABPAQ06546 454 aa12.53□□□□□ -0.4
PARVB-206ENST00000477438 TRDNQ13061 729 aa12.53□□□□□ -0.4
PARVB-206ENST00000477438 MTMR2Q13614 643 aa12.53□□□□□ -0.4
PARVB-206ENST00000477438 ZYXQ15942 572 aaKnown RBP12.53□□□□□ -0.4
PARVB-206ENST00000477438 MCTP1Q6DN14 999 aa12.53□□□□□ -0.4
PARVB-206ENST00000477438 MFSD6Q6ZSS7 791 aa12.53□□□□□ -0.4
PARVB-206ENST00000477438 RASEFQ8IZ41 740 aa12.53□□□□□ -0.4
PARVB-206ENST00000477438 JAKMIP1Q96N16 626 aaKnown RBP12.53□□□□□ -0.4
PARVB-206ENST00000477438 UPF3BQ9BZI7 483 aaKnown RBP12.53□□□□□ -0.4
PARVB-206ENST00000477438 IL25Q9H293 177 aa12.53□□□□□ -0.4
PARVB-206ENST00000477438 LMBRD1Q9NUN5 540 aa12.53□□□□□ -0.4
PARVB-206ENST00000477438 SAGE1Q9NXZ1 904 aa12.53□□□□□ -0.4
PARVB-206ENST00000477438 PNMA3Q9UL41 463 aa12.53□□□□□ -0.4
PARVB-206ENST00000477438 SMC3Q9UQE7 1217 aa12.53□□□□□ -0.4
PARVB-206ENST00000477438 USP17L10C9JJH3 530 aa12.52□□□□□ -0.41
PARVB-206ENST00000477438 SLC27A2O14975 620 aa12.52□□□□□ -0.41
PARVB-206ENST00000477438 TRPA1O75762 1119 aa12.52□□□□□ -0.41
PARVB-206ENST00000477438 PDCP20941 246 aa12.52□□□□□ -0.41
PARVB-206ENST00000477438 GJA5P36382 358 aa12.52□□□□□ -0.41
PARVB-206ENST00000477438 CTCFP49711 727 aaPredicted RBP12.52□□□□□ -0.41
PARVB-206ENST00000477438 SPP2Q13103 211 aa12.52□□□□□ -0.41
PARVB-206ENST00000477438 SEPT2Q15019 361 aa12.52□□□□□ -0.41
PARVB-206ENST00000477438 TAF1CQ15572 869 aaPredicted RBP12.52□□□□□ -0.41
PARVB-206ENST00000477438 BLOC1S2Q6QNY1 142 aa12.52□□□□□ -0.41
PARVB-206ENST00000477438 RALYLQ86SE5 291 aaKnown RBP12.52□□□□□ -0.41
PARVB-206ENST00000477438 CCDC84Q86UT8 332 aaPredicted RBP12.52□□□□□ -0.41
PARVB-206ENST00000477438 IFNL1Q8IU54 200 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms