RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 MDM2Q00987 491 aaPredicted RBP17.28■□□□□ 0.36
CLSTN1-205ENST00000477264 RHOXF2Q9BQY4 288 aa17.28■□□□□ 0.36
CLSTN1-205ENST00000477264 CCNL1Q9UK58 526 aaPredicted RBP17.28■□□□□ 0.36
CLSTN1-205ENST00000477264 TARSL2A2RTX5 802 aaKnown RBP17.27■□□□□ 0.36
CLSTN1-205ENST00000477264 LRRIQ3A6PVS8 624 aaPredicted RBP17.27■□□□□ 0.36
CLSTN1-205ENST00000477264 RNF113AO15541 343 aaKnown RBP17.27■□□□□ 0.36
CLSTN1-205ENST00000477264 BMP6P22004 513 aa17.27■□□□□ 0.36
CLSTN1-205ENST00000477264 MTF1Q14872 753 aa17.27■□□□□ 0.36
CLSTN1-205ENST00000477264 HLFQ16534 295 aa17.27■□□□□ 0.36
CLSTN1-205ENST00000477264 CPLX2Q6PUV4 134 aaKnown RBP17.27■□□□□ 0.36
CLSTN1-205ENST00000477264 MB21D2Q8IYB1 491 aaPredicted RBP17.27■□□□□ 0.36
CLSTN1-205ENST00000477264 SLC35F6Q8N357 371 aa17.27■□□□□ 0.36
CLSTN1-205ENST00000477264 LINC00116Q8NCU8 138 aa17.27■□□□□ 0.36
CLSTN1-205ENST00000477264 ZBTB9Q96C00 473 aa17.27■□□□□ 0.36
CLSTN1-205ENST00000477264 TACO1Q9BSH4 297 aaKnown RBP17.27■□□□□ 0.36
CLSTN1-205ENST00000477264 ERLIN2O94905 339 aa17.26■□□□□ 0.35
CLSTN1-205ENST00000477264 SARSP49591 514 aaKnown RBP17.26■□□□□ 0.35
CLSTN1-205ENST00000477264 LONRF3Q496Y0 759 aa17.26■□□□□ 0.35
CLSTN1-205ENST00000477264 TMTC1Q8IUR5 882 aa17.26■□□□□ 0.35
CLSTN1-205ENST00000477264 KRI1Q8N9T8 703 aaKnown RBP17.26■□□□□ 0.35
CLSTN1-205ENST00000477264 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.26■□□□□ 0.35
CLSTN1-205ENST00000477264 CDC27P30260 824 aa17.26■□□□□ 0.35
CLSTN1-205ENST00000477264 PBX1P40424 430 aa17.26■□□□□ 0.35
CLSTN1-205ENST00000477264 CASP7P55210 303 aa17.26■□□□□ 0.35
CLSTN1-205ENST00000477264 KCNQ4P56696 695 aa17.26■□□□□ 0.35
CLSTN1-205ENST00000477264 EPHA10Q5JZY3 1008 aa17.26■□□□□ 0.35
CLSTN1-205ENST00000477264 GBP6Q6ZN66 633 aa17.26■□□□□ 0.35
CLSTN1-205ENST00000477264 FOXP4Q8IVH2 680 aaPredicted RBP17.26■□□□□ 0.35
CLSTN1-205ENST00000477264 IGSF22Q8N9C0 903 aa17.26■□□□□ 0.35
CLSTN1-205ENST00000477264 NCOA7Q8NI08 942 aa17.26■□□□□ 0.35
CLSTN1-205ENST00000477264 ALG1Q9BT22 464 aa17.26■□□□□ 0.35
CLSTN1-205ENST00000477264 IRX2Q9BZI1 471 aaPredicted RBP17.26■□□□□ 0.35
CLSTN1-205ENST00000477264 LY75O60449 1722 aa17.26■□□□□ 0.35
CLSTN1-205ENST00000477264 CDHR2Q9BYE9 1310 aa17.26■□□□□ 0.35
CLSTN1-205ENST00000477264 CNTNAP4Q9C0A0 1308 aa17.26■□□□□ 0.35
CLSTN1-205ENST00000477264 LOC102724159A0A0B4J2E5 919 aa17.25■□□□□ 0.35
CLSTN1-205ENST00000477264 GOLIM4O00461 696 aa17.25■□□□□ 0.35
CLSTN1-205ENST00000477264 SYF2O95926 243 aaKnown RBP17.25■□□□□ 0.35
CLSTN1-205ENST00000477264 GPTP24298 496 aa17.25■□□□□ 0.35
CLSTN1-205ENST00000477264 FMR1Q06787 632 aaKnown RBP eCLIP17.25■□□□□ 0.351e-6■■■■□ 23.7
CLSTN1-205ENST00000477264 TRIM14Q14142 442 aa17.25■□□□□ 0.35
CLSTN1-205ENST00000477264 PWP2Q15269 919 aaKnown RBP17.25■□□□□ 0.35
CLSTN1-205ENST00000477264 FILIP1LQ4L180 1135 aa17.25■□□□□ 0.35
CLSTN1-205ENST00000477264 SUGCTQ9HAC7 445 aa17.25■□□□□ 0.35
CLSTN1-205ENST00000477264 WWC3Q9ULE0 1092 aa17.25■□□□□ 0.35
CLSTN1-205ENST00000477264 HPCAL4Q9UM19 191 aa17.25■□□□□ 0.35
CLSTN1-205ENST00000477264 MYO6Q9UM54 1294 aa17.25■□□□□ 0.35
CLSTN1-205ENST00000477264 A6NNZ2 444 aa17.25■□□□□ 0.35
CLSTN1-205ENST00000477264 PPFIA3O75145 1194 aa17.25■□□□□ 0.35
CLSTN1-205ENST00000477264 CHGBP05060 677 aa17.25■□□□□ 0.35
CLSTN1-205ENST00000477264 RXRBP28702 533 aa17.25■□□□□ 0.35
CLSTN1-205ENST00000477264 USP14P54578 494 aa17.25■□□□□ 0.35
CLSTN1-205ENST00000477264 AMPD2Q01433 879 aa17.25■□□□□ 0.35
CLSTN1-205ENST00000477264 TUBB8Q3ZCM7 444 aa17.25■□□□□ 0.35
CLSTN1-205ENST00000477264 CHST3Q7LGC8 479 aa17.25■□□□□ 0.35
CLSTN1-205ENST00000477264 RALYLQ86SE5 291 aaKnown RBP17.25■□□□□ 0.35
CLSTN1-205ENST00000477264 MICALL1Q8N3F8 863 aa17.25■□□□□ 0.35
CLSTN1-205ENST00000477264 NDUFB9Q9Y6M9 179 aa17.25■□□□□ 0.35
CLSTN1-205ENST00000477264 CCDC196A0A1B0GTZ2 297 aa17.24■□□□□ 0.35
CLSTN1-205ENST00000477264 ZFYP08048 801 aaPredicted RBP17.24■□□□□ 0.35
CLSTN1-205ENST00000477264 TRIM29Q14134 588 aa17.24■□□□□ 0.35
CLSTN1-205ENST00000477264 PTPN21Q16825 1174 aa17.24■□□□□ 0.35
CLSTN1-205ENST00000477264 KRT40Q6A162 431 aa17.24■□□□□ 0.35
CLSTN1-205ENST00000477264 RUBCNQ92622 972 aa17.24■□□□□ 0.35
CLSTN1-205ENST00000477264 EBAG9O00559 213 aa17.23■□□□□ 0.35
CLSTN1-205ENST00000477264 CKAP4Q07065 602 aaKnown RBP17.23■□□□□ 0.35
CLSTN1-205ENST00000477264 RC3H1Q5TC82 1133 aaKnown RBP17.23■□□□□ 0.35
CLSTN1-205ENST00000477264 SPATA1Q5VX52 437 aa17.23■□□□□ 0.35
CLSTN1-205ENST00000477264 WWC2Q6AWC2 1192 aa17.23■□□□□ 0.35
CLSTN1-205ENST00000477264 ZBTB38Q8NAP3 1195 aaPredicted RBP17.23■□□□□ 0.35
CLSTN1-205ENST00000477264 FAM76AQ8TAV0 307 aa17.23■□□□□ 0.35
CLSTN1-205ENST00000477264 COG1Q8WTW3 980 aa17.23■□□□□ 0.35
CLSTN1-205ENST00000477264 TOMM22Q9NS69 142 aa17.23■□□□□ 0.35
CLSTN1-205ENST00000477264 KIF1CO43896 1103 aaKnown RBP17.23■□□□□ 0.35
CLSTN1-205ENST00000477264 PHACTR2O75167 634 aa17.23■□□□□ 0.35
CLSTN1-205ENST00000477264 PCCAP05165 728 aaPredicted RBP17.23■□□□□ 0.35
CLSTN1-205ENST00000477264 RBL2Q08999 1139 aa17.23■□□□□ 0.35
CLSTN1-205ENST00000477264 TRDNQ13061 729 aa17.23■□□□□ 0.35
CLSTN1-205ENST00000477264 STIM1Q13586 685 aa17.23■□□□□ 0.35
CLSTN1-205ENST00000477264 LMBR1LQ6UX01 489 aa17.23■□□□□ 0.35
CLSTN1-205ENST00000477264 NLRP10Q86W26 655 aa17.23■□□□□ 0.35
CLSTN1-205ENST00000477264 ZNF579Q8NAF0 562 aaKnown RBP17.23■□□□□ 0.35
CLSTN1-205ENST00000477264 ZNF652Q9Y2D9 606 aa17.23■□□□□ 0.35
CLSTN1-205ENST00000477264 STK36Q9NRP7 1315 aa17.23■□□□□ 0.35
CLSTN1-205ENST00000477264 PSEN1P49768 467 aa17.22■□□□□ 0.35
CLSTN1-205ENST00000477264 APTXQ7Z2E3 356 aaKnown RBP17.22■□□□□ 0.35
CLSTN1-205ENST00000477264 SPATA20Q8TB22 786 aa17.22■□□□□ 0.35
CLSTN1-205ENST00000477264 CRACR2AQ9BSW2 395 aa17.22■□□□□ 0.35
CLSTN1-205ENST00000477264 ADD3Q9UEY8 706 aaKnown RBP17.22■□□□□ 0.35
CLSTN1-205ENST00000477264 SHTN1A0MZ66 631 aa17.22■□□□□ 0.35
CLSTN1-205ENST00000477264 TRIM37O94972 964 aa17.22■□□□□ 0.35
CLSTN1-205ENST00000477264 PPFIA1Q13136 1202 aa17.22■□□□□ 0.35
CLSTN1-205ENST00000477264 CYP26C1Q6V0L0 522 aa17.22■□□□□ 0.35
CLSTN1-205ENST00000477264 SPATS2Q86XZ4 545 aaKnown RBP17.22■□□□□ 0.35
CLSTN1-205ENST00000477264 ANKRD20A12PQ8NF67 263 aa17.22■□□□□ 0.35
CLSTN1-205ENST00000477264 FAM89AQ96GI7 184 aa17.22■□□□□ 0.35
CLSTN1-205ENST00000477264 SYNRGQ9UMZ2 1314 aa17.22■□□□□ 0.35
CLSTN1-205ENST00000477264 TAF1LQ8IZX4 1826 aa17.21■□□□□ 0.35
CLSTN1-205ENST00000477264 CLGNO14967 610 aa17.21■□□□□ 0.35
CLSTN1-205ENST00000477264 CAMTA2O94983 1202 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms