RNA–Protein interactions for RNA: ENST00000477174.1

ACTN4-205, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-205ENST00000477174 ACER1Q8TDN7 264 aa16.03■□□□□ 0.16
ACTN4-205ENST00000477174 C12orf42Q96LP6 360 aa16.03■□□□□ 0.16
ACTN4-205ENST00000477174 FEZ1Q99689 392 aa16.03■□□□□ 0.16
ACTN4-205ENST00000477174 KANSL2Q9H9L4 492 aa16.03■□□□□ 0.16
ACTN4-205ENST00000477174 MKNK2Q9HBH9 465 aa16.03■□□□□ 0.16
ACTN4-205ENST00000477174 TRIM17Q9Y577 477 aa16.03■□□□□ 0.16
ACTN4-205ENST00000477174 MYH7P12883 1935 aa16.03■□□□□ 0.16
ACTN4-205ENST00000477174 A0A0D9SFI3 127 aa16.02■□□□□ 0.16
ACTN4-205ENST00000477174 SLC3A2P08195 630 aaKnown RBP16.02■□□□□ 0.16
ACTN4-205ENST00000477174 AKR1B1P15121 316 aa16.02■□□□□ 0.16
ACTN4-205ENST00000477174 GCLCP48506 637 aaPredicted RBP16.02■□□□□ 0.16
ACTN4-205ENST00000477174 MFAP1P55081 439 aaKnown RBP16.02■□□□□ 0.16
ACTN4-205ENST00000477174 NMIQ13287 307 aaPredicted RBP16.02■□□□□ 0.16
ACTN4-205ENST00000477174 CCDC129Q6ZRS4 1044 aa16.02■□□□□ 0.16
ACTN4-205ENST00000477174 ASCC2Q9H1I8 757 aaPredicted RBP16.02■□□□□ 0.16
ACTN4-205ENST00000477174 FOXP2O15409 715 aa16.01■□□□□ 0.15
ACTN4-205ENST00000477174 IRX3P78415 501 aaPredicted RBP16.01■□□□□ 0.15
ACTN4-205ENST00000477174 PDE4BQ07343 736 aa16.01■□□□□ 0.15
ACTN4-205ENST00000477174 TTC22Q5TAA0 569 aa16.01■□□□□ 0.15
ACTN4-205ENST00000477174 SIAH1Q8IUQ4 282 aa16.01■□□□□ 0.15
ACTN4-205ENST00000477174 ZNF444Q8N0Y2 327 aaPredicted RBP16.01■□□□□ 0.15
ACTN4-205ENST00000477174 DIAPH3Q9NSV4 1193 aa16.01■□□□□ 0.15
ACTN4-205ENST00000477174 PTPN22Q9Y2R2 807 aa16.01■□□□□ 0.15
ACTN4-205ENST00000477174 DDX60LQ5H9U9 1706 aaKnown RBP16.01■□□□□ 0.15
ACTN4-205ENST00000477174 PHIPQ8WWQ0 1821 aa16.01■□□□□ 0.15
ACTN4-205ENST00000477174 ROBO3Q96MS0 1386 aa16■□□□□ 0.15
ACTN4-205ENST00000477174 A0A1W2PRG0 241 aa16■□□□□ 0.15
ACTN4-205ENST00000477174 USP17L15C9J2P7 530 aa16■□□□□ 0.15
ACTN4-205ENST00000477174 USP17L13C9JLJ4 530 aa16■□□□□ 0.15
ACTN4-205ENST00000477174 USP17L11C9JVI0 530 aa16■□□□□ 0.15
ACTN4-205ENST00000477174 USP17L18D6R9N7 530 aa16■□□□□ 0.15
ACTN4-205ENST00000477174 USP17L22D6RA61 530 aa16■□□□□ 0.15
ACTN4-205ENST00000477174 USP17L17D6RBQ6 530 aa16■□□□□ 0.15
ACTN4-205ENST00000477174 USP17L19D6RCP7 530 aa16■□□□□ 0.15
ACTN4-205ENST00000477174 USP17L20D6RJB6 530 aa16■□□□□ 0.15
ACTN4-205ENST00000477174 RASA1P20936 1047 aa16■□□□□ 0.15
ACTN4-205ENST00000477174 HOXD10P28358 340 aa16■□□□□ 0.15
ACTN4-205ENST00000477174 PSMC4P43686 418 aa16■□□□□ 0.15
ACTN4-205ENST00000477174 PRMT2P55345 433 aa16■□□□□ 0.15
ACTN4-205ENST00000477174 PPARAQ07869 468 aa16■□□□□ 0.15
ACTN4-205ENST00000477174 USP17L24Q0WX57 530 aa16■□□□□ 0.15
ACTN4-205ENST00000477174 VPS53Q5VIR6 699 aa16■□□□□ 0.15
ACTN4-205ENST00000477174 CENPQQ7L2Z9 268 aaPredicted RBP16■□□□□ 0.15
ACTN4-205ENST00000477174 P2RX7Q99572 595 aaKnown RBP16■□□□□ 0.15
ACTN4-205ENST00000477174 SH2D4AQ9H788 454 aa16■□□□□ 0.15
ACTN4-205ENST00000477174 ARHGEF10LQ9HCE6 1279 aa16■□□□□ 0.15
ACTN4-205ENST00000477174 TMX2Q9Y320 296 aa16■□□□□ 0.15
ACTN4-205ENST00000477174 NAV1Q8NEY1 1877 aa15.99■□□□□ 0.15
ACTN4-205ENST00000477174 FGAP02671 866 aa15.99■□□□□ 0.15
ACTN4-205ENST00000477174 HSPD1P10809 573 aaKnown RBP15.99■□□□□ 0.15
ACTN4-205ENST00000477174 CAP1Q01518 475 aa15.99■□□□□ 0.15
ACTN4-205ENST00000477174 ICA1Q05084 483 aa15.99■□□□□ 0.15
ACTN4-205ENST00000477174 ZYXQ15942 572 aaKnown RBP15.99■□□□□ 0.15
ACTN4-205ENST00000477174 FAM110CQ1W6H9 321 aa15.99■□□□□ 0.15
ACTN4-205ENST00000477174 CWC27Q6UX04 472 aaKnown RBP15.99■□□□□ 0.15
ACTN4-205ENST00000477174 ANKRD13CQ8N6S4 541 aa15.99■□□□□ 0.15
ACTN4-205ENST00000477174 GTF3C2Q8WUA4 911 aaPredicted RBP15.99■□□□□ 0.15
ACTN4-205ENST00000477174 ANAPC4Q9UJX5 808 aa15.99■□□□□ 0.15
ACTN4-205ENST00000477174 HPS5Q9UPZ3 1129 aa15.99■□□□□ 0.15
ACTN4-205ENST00000477174 CCDC171Q6TFL3 1326 aa15.98■□□□□ 0.15
ACTN4-205ENST00000477174 CCDC85CA6NKD9 419 aa15.98■□□□□ 0.15
ACTN4-205ENST00000477174 FMNL1O95466 1100 aaPredicted RBP15.98■□□□□ 0.15
ACTN4-205ENST00000477174 GSPT1P15170 499 aaKnown RBP15.98■□□□□ 0.15
ACTN4-205ENST00000477174 VCAM1P19320 739 aa15.98■□□□□ 0.15
ACTN4-205ENST00000477174 FCGRTP55899 365 aa15.98■□□□□ 0.15
ACTN4-205ENST00000477174 HERVK_113P62684 666 aa15.98■□□□□ 0.15
ACTN4-205ENST00000477174 CATSPERGQ6ZRH7 1159 aa15.98■□□□□ 0.15
ACTN4-205ENST00000477174 ZNF589Q86UQ0 364 aaPredicted RBP15.98■□□□□ 0.15
ACTN4-205ENST00000477174 STK11IPQ8N1F8 1099 aa15.98■□□□□ 0.15
ACTN4-205ENST00000477174 LPAR1Q92633 364 aa15.98■□□□□ 0.15
ACTN4-205ENST00000477174 TRIM47Q96LD4 638 aa15.98■□□□□ 0.15
ACTN4-205ENST00000477174 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.98■□□□□ 0.15
ACTN4-205ENST00000477174 ARHGAP39Q9C0H5 1083 aa15.98■□□□□ 0.15
ACTN4-205ENST00000477174 CAPN15O75808 1086 aa15.97■□□□□ 0.15
ACTN4-205ENST00000477174 EEF2P13639 858 aaKnown RBP15.97■□□□□ 0.15
ACTN4-205ENST00000477174 HOXC10Q9NYD6 342 aa15.97■□□□□ 0.15
ACTN4-205ENST00000477174 NYAP2Q9P242 653 aa15.97■□□□□ 0.15
ACTN4-205ENST00000477174 MORF4L1Q9UBU8 362 aa15.97■□□□□ 0.15
ACTN4-205ENST00000477174 BAZ2AQ9UIF9 1905 aaKnown RBP15.97■□□□□ 0.15
ACTN4-205ENST00000477174 ZMYM6O95789 1325 aa15.96■□□□□ 0.15
ACTN4-205ENST00000477174 ATAD5Q96QE3 1844 aa15.96■□□□□ 0.15
ACTN4-205ENST00000477174 PTPRFP10586 1907 aa15.96■□□□□ 0.15
ACTN4-205ENST00000477174 PRDM1O75626 825 aa15.96■□□□□ 0.15
ACTN4-205ENST00000477174 NEFLP07196 543 aa15.96■□□□□ 0.15
ACTN4-205ENST00000477174 FGRP09769 529 aa15.96■□□□□ 0.15
ACTN4-205ENST00000477174 CTGFP29279 349 aa15.96■□□□□ 0.15
ACTN4-205ENST00000477174 GPRC5AQ8NFJ5 357 aa15.96■□□□□ 0.15
ACTN4-205ENST00000477174 NEDD1Q8NHV4 660 aa15.96■□□□□ 0.15
ACTN4-205ENST00000477174 RPAP3Q9H6T3 665 aaPredicted RBP15.96■□□□□ 0.15
ACTN4-205ENST00000477174 VCPKMTQ9H867 229 aa15.96■□□□□ 0.15
ACTN4-205ENST00000477174 RBPJLQ9UBG7 517 aa15.96■□□□□ 0.15
ACTN4-205ENST00000477174 SRRDQ9UH36 339 aa15.96■□□□□ 0.15
ACTN4-205ENST00000477174 IGKV6D-41A0A0C4DH26 115 aa15.95■□□□□ 0.14
ACTN4-205ENST00000477174 TSPY3P0CV98 308 aa15.95■□□□□ 0.14
ACTN4-205ENST00000477174 TSPY8P0CW00 308 aa15.95■□□□□ 0.14
ACTN4-205ENST00000477174 TFAP4Q01664 338 aa15.95■□□□□ 0.14
ACTN4-205ENST00000477174 ATP2B2Q01814 1243 aa15.95■□□□□ 0.14
ACTN4-205ENST00000477174 COG2Q14746 738 aa15.95■□□□□ 0.14
ACTN4-205ENST00000477174 PPP4R3BQ5MIZ7 849 aa15.95■□□□□ 0.14
ACTN4-205ENST00000477174 LBX2Q6XYB7 198 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms