RNA–Protein interactions for RNA: ENST00000476994.1

SREBF1-211, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-211ENST00000476994 ZNF213O14771 459 aa20.92■□□□□ 0.94
SREBF1-211ENST00000476994 POLR3DP05423 398 aaPredicted RBP20.92■□□□□ 0.94
SREBF1-211ENST00000476994 MAP3K10Q02779 954 aa20.92■□□□□ 0.94
SREBF1-211ENST00000476994 COL9A3Q14050 684 aaPredicted RBP20.92■□□□□ 0.94
SREBF1-211ENST00000476994 TTC6Q86TZ1 520 aa20.92■□□□□ 0.94
SREBF1-211ENST00000476994 NKX2-3Q8TAU0 364 aa20.92■□□□□ 0.94
SREBF1-211ENST00000476994 ARMC5Q96C12 935 aa20.92■□□□□ 0.94
SREBF1-211ENST00000476994 KIF2CQ99661 725 aa20.92■□□□□ 0.94
SREBF1-211ENST00000476994 GNRH1P01148 92 aa20.91■□□□□ 0.94
SREBF1-211ENST00000476994 INPP5BP32019 993 aa20.91■□□□□ 0.94
SREBF1-211ENST00000476994 C16orf86Q6ZW13 317 aa20.91■□□□□ 0.94
SREBF1-211ENST00000476994 ZSCAN29Q8IWY8 852 aaPredicted RBP20.91■□□□□ 0.94
SREBF1-211ENST00000476994 STAG1Q8WVM7 1258 aa20.91■□□□□ 0.94
SREBF1-211ENST00000476994 DYNLL2Q96FJ2 89 aa20.91■□□□□ 0.94
SREBF1-211ENST00000476994 PI4KBQ9UBF8 816 aa20.91■□□□□ 0.94
SREBF1-211ENST00000476994 HTTP42858 3142 aa20.91■□□□□ 0.94
SREBF1-211ENST00000476994 DOCK1Q14185 1865 aa20.9■□□□□ 0.94
SREBF1-211ENST00000476994 NEDD4P46934 1319 aa20.9■□□□□ 0.94
SREBF1-211ENST00000476994 ANAPC15P60006 121 aa20.9■□□□□ 0.94
SREBF1-211ENST00000476994 AKNAD1Q5T1N1 836 aa20.9■□□□□ 0.94
SREBF1-211ENST00000476994 RNF20Q5VTR2 975 aa20.9■□□□□ 0.94
SREBF1-211ENST00000476994 SLC44A5Q8NCS7 719 aa20.9■□□□□ 0.94
SREBF1-211ENST00000476994 INCENPQ9NQS7 918 aa20.9■□□□□ 0.94
SREBF1-211ENST00000476994 ZNF112Q9UJU3 913 aa20.9■□□□□ 0.94
SREBF1-211ENST00000476994 E7EWF7 191 aa20.89■□□□□ 0.93
SREBF1-211ENST00000476994 HLA-DOAP06340 250 aa20.89■□□□□ 0.93
SREBF1-211ENST00000476994 MCCP23508 829 aa20.89■□□□□ 0.93
SREBF1-211ENST00000476994 PRMT2P55345 433 aa20.89■□□□□ 0.93
SREBF1-211ENST00000476994 LACTBP83111 547 aaPredicted RBP20.89■□□□□ 0.93
SREBF1-211ENST00000476994 ADCK5Q3MIX3 580 aa20.89■□□□□ 0.93
SREBF1-211ENST00000476994 ANKRD23Q86SG2 305 aa20.89■□□□□ 0.93
SREBF1-211ENST00000476994 PICK1Q9NRD5 415 aa20.89■□□□□ 0.93
SREBF1-211ENST00000476994 SERPINB13Q9UIV8 391 aa20.89■□□□□ 0.93
SREBF1-211ENST00000476994 TAOK2Q9UL54 1235 aa20.89■□□□□ 0.93
SREBF1-211ENST00000476994 MYH4Q9Y623 1939 aa20.88■□□□□ 0.93
SREBF1-211ENST00000476994 PHIPQ8WWQ0 1821 aa20.88■□□□□ 0.93
SREBF1-211ENST00000476994 POTEFA5A3E0 1075 aa20.88■□□□□ 0.93
SREBF1-211ENST00000476994 ORC4O43929 436 aa20.88■□□□□ 0.93
SREBF1-211ENST00000476994 TBC1D12O60347 775 aa20.88■□□□□ 0.93
SREBF1-211ENST00000476994 SHMT1P34896 483 aa20.88■□□□□ 0.93
SREBF1-211ENST00000476994 NOL9Q5SY16 702 aaKnown RBP20.88■□□□□ 0.93
SREBF1-211ENST00000476994 FOXP4Q8IVH2 680 aaPredicted RBP20.88■□□□□ 0.93
SREBF1-211ENST00000476994 AMOTL1Q8IY63 956 aa20.88■□□□□ 0.93
SREBF1-211ENST00000476994 UPF2Q9HAU5 1272 aaKnown RBP20.88■□□□□ 0.93
SREBF1-211ENST00000476994 PTCH2Q9Y6C5 1203 aa20.88■□□□□ 0.93
SREBF1-211ENST00000476994 FAM196BA6NMK8 535 aa20.87■□□□□ 0.93
SREBF1-211ENST00000476994 PCP11498 1178 aaKnown RBP20.87■□□□□ 0.93
SREBF1-211ENST00000476994 HOXD10P28358 340 aa20.87■□□□□ 0.93
SREBF1-211ENST00000476994 CDK8P49336 464 aa20.87■□□□□ 0.93
SREBF1-211ENST00000476994 KCNH4Q9UQ05 1017 aa20.87■□□□□ 0.93
SREBF1-211ENST00000476994 PDHXO00330 501 aa20.86■□□□□ 0.93
SREBF1-211ENST00000476994 ZKSCAN1P17029 563 aaPredicted RBP20.86■□□□□ 0.93
SREBF1-211ENST00000476994 RASA1P20936 1047 aa20.86■□□□□ 0.93
SREBF1-211ENST00000476994 TATDN1Q6P1N9 297 aa20.86■□□□□ 0.93
SREBF1-211ENST00000476994 MB21D2Q8IYB1 491 aaPredicted RBP20.86■□□□□ 0.93
SREBF1-211ENST00000476994 STK11IPQ8N1F8 1099 aa20.86■□□□□ 0.93
SREBF1-211ENST00000476994 ZNF333Q96JL9 665 aa20.86■□□□□ 0.93
SREBF1-211ENST00000476994 SWAP70Q9UH65 585 aa20.86■□□□□ 0.93
SREBF1-211ENST00000476994 HERC5Q9UII4 1024 aaKnown RBP20.86■□□□□ 0.93
SREBF1-211ENST00000476994 ZSWIM8A7E2V4 1837 aa20.85■□□□□ 0.93
SREBF1-211ENST00000476994 CXCL11O14625 94 aa20.85■□□□□ 0.93
SREBF1-211ENST00000476994 RRP1BQ14684 758 aaKnown RBP20.85■□□□□ 0.93
SREBF1-211ENST00000476994 MFSD6Q6ZSS7 791 aa20.85■□□□□ 0.93
SREBF1-211ENST00000476994 FASTKD5Q7L8L6 764 aaKnown RBP20.85■□□□□ 0.93
SREBF1-211ENST00000476994 PARK7Q99497 189 aaKnown RBP20.85■□□□□ 0.93
SREBF1-211ENST00000476994 TM6SF1Q9BZW5 370 aa20.85■□□□□ 0.93
SREBF1-211ENST00000476994 RNF41Q9H4P4 317 aaPredicted RBP20.85■□□□□ 0.93
SREBF1-211ENST00000476994 MGAMO43451 1857 aa20.85■□□□□ 0.93
SREBF1-211ENST00000476994 PRDM1O75626 825 aa20.84■□□□□ 0.93
SREBF1-211ENST00000476994 SLC3A2P08195 630 aaKnown RBP20.84■□□□□ 0.93
SREBF1-211ENST00000476994 KRT32Q14532 448 aa20.84■□□□□ 0.93
SREBF1-211ENST00000476994 SCYL3Q8IZE3 742 aa20.84■□□□□ 0.93
SREBF1-211ENST00000476994 CPA4Q9UI42 421 aa20.84■□□□□ 0.93
SREBF1-211ENST00000476994 PLIN4Q96Q06 1357 aa20.84■□□□□ 0.93
SREBF1-211ENST00000476994 PTPRFP10586 1907 aa20.83■□□□□ 0.93
SREBF1-211ENST00000476994 PHF20L1A8MW92 1017 aa20.83■□□□□ 0.93
SREBF1-211ENST00000476994 B4E1Z4 1266 aa20.83■□□□□ 0.93
SREBF1-211ENST00000476994 ANTXR2P58335 489 aa20.83■□□□□ 0.93
SREBF1-211ENST00000476994 PDE4BQ07343 736 aa20.83■□□□□ 0.93
SREBF1-211ENST00000476994 C17orf99Q6UX52 265 aa20.83■□□□□ 0.93
SREBF1-211ENST00000476994 JAKMIP1Q96N16 626 aaKnown RBP20.83■□□□□ 0.93
SREBF1-211ENST00000476994 ZSWIM6Q9HCJ5 1215 aa20.83■□□□□ 0.93
SREBF1-211ENST00000476994 ZHX2Q9Y6X8 837 aa20.83■□□□□ 0.93
SREBF1-211ENST00000476994 FMNL1O95466 1100 aaPredicted RBP20.82■□□□□ 0.92
SREBF1-211ENST00000476994 EN2P19622 333 aaPredicted RBP20.82■□□□□ 0.92
SREBF1-211ENST00000476994 PSMC4P43686 418 aa20.82■□□□□ 0.92
SREBF1-211ENST00000476994 CAP1Q01518 475 aa20.82■□□□□ 0.92
SREBF1-211ENST00000476994 CYB5R4Q7L1T6 521 aa20.82■□□□□ 0.92
SREBF1-211ENST00000476994 CRACR2BQ8N4Y2 399 aaPredicted RBP20.82■□□□□ 0.92
SREBF1-211ENST00000476994 NCOA7Q8NI08 942 aa20.82■□□□□ 0.92
SREBF1-211ENST00000476994 NEK1Q96PY6 1258 aa20.82■□□□□ 0.92
SREBF1-211ENST00000476994 ARHGAP39Q9C0H5 1083 aa20.82■□□□□ 0.92
SREBF1-211ENST00000476994 CNNM2Q9H8M5 875 aa20.82■□□□□ 0.92
SREBF1-211ENST00000476994 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.82■□□□□ 0.92
SREBF1-211ENST00000476994 CTNND1O60716 968 aaKnown RBP20.81■□□□□ 0.92
SREBF1-211ENST00000476994 CPA1P15085 419 aa20.81■□□□□ 0.92
SREBF1-211ENST00000476994 NT5C2P49902 561 aa20.81■□□□□ 0.92
SREBF1-211ENST00000476994 JAG1P78504 1218 aa20.81■□□□□ 0.92
SREBF1-211ENST00000476994 SHROOM1Q2M3G4 852 aaPredicted RBP20.81■□□□□ 0.92
SREBF1-211ENST00000476994 RAET1EQ8TD07 263 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms