RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 CPLX2Q6PUV4 134 aaKnown RBP33.65■■■□□ 2.98
VEGFA-211ENST00000476772 TMEM39BQ9GZU3 492 aa33.65■■■□□ 2.98
VEGFA-211ENST00000476772 GREB1LQ9C091 1923 aaPredicted RBP33.65■■■□□ 2.98
VEGFA-211ENST00000476772 CDKL5O76039 1030 aa33.64■■■□□ 2.98
VEGFA-211ENST00000476772 CALM1P0DP23 149 aa33.64■■■□□ 2.98
VEGFA-211ENST00000476772 CALM2P0DP24 149 aa33.64■■■□□ 2.98
VEGFA-211ENST00000476772 CALM3P0DP25 149 aa33.64■■■□□ 2.98
VEGFA-211ENST00000476772 MTMR6Q9Y217 621 aa33.64■■■□□ 2.98
VEGFA-211ENST00000476772 TATDN1Q6P1N9 297 aa33.64■■■□□ 2.98
VEGFA-211ENST00000476772 ASTN2O75129 1339 aaPredicted RBP33.64■■■□□ 2.97
VEGFA-211ENST00000476772 IGKV6D-41A0A0C4DH26 115 aa33.63■■■□□ 2.97
VEGFA-211ENST00000476772 VPS37CA5D8V6 355 aaPredicted RBP33.63■■■□□ 2.97
VEGFA-211ENST00000476772 DDNO94850 711 aaPredicted RBP33.63■■■□□ 2.97
VEGFA-211ENST00000476772 ZSCAN22P10073 491 aaPredicted RBP33.63■■■□□ 2.97
VEGFA-211ENST00000476772 CDAN1Q8IWY9 1227 aa33.63■■■□□ 2.97
VEGFA-211ENST00000476772 PNMA1Q8ND90 353 aa33.63■■■□□ 2.97
VEGFA-211ENST00000476772 CCDC17Q96LX7 622 aa33.63■■■□□ 2.97
VEGFA-211ENST00000476772 TMEM47Q9BQJ4 181 aa33.63■■■□□ 2.97
VEGFA-211ENST00000476772 ORC3Q9UBD5 711 aaPredicted RBP33.63■■■□□ 2.97
VEGFA-211ENST00000476772 KIF3AQ9Y496 699 aa33.63■■■□□ 2.97
VEGFA-211ENST00000476772 CCDC196A0A1B0GTZ2 297 aa33.62■■■□□ 2.97
VEGFA-211ENST00000476772 NOVP48745 357 aa33.62■■■□□ 2.97
VEGFA-211ENST00000476772 SCAF8Q9UPN6 1271 aaKnown RBP33.62■■■□□ 2.97
VEGFA-211ENST00000476772 TNNI2P48788 182 aa33.61■■■□□ 2.97
VEGFA-211ENST00000476772 PPP2R5BQ15173 497 aa33.61■■■□□ 2.97
VEGFA-211ENST00000476772 CERKLQ49MI3 558 aaPredicted RBP33.61■■■□□ 2.97
VEGFA-211ENST00000476772 TRPM4Q8TD43 1214 aa33.61■■■□□ 2.97
VEGFA-211ENST00000476772 PHKBQ93100 1093 aa33.61■■■□□ 2.97
VEGFA-211ENST00000476772 MPHOSPH10O00566 681 aaKnown RBP33.61■■■□□ 2.97
VEGFA-211ENST00000476772 MTMR4Q9NYA4 1195 aa33.61■■■□□ 2.97
VEGFA-211ENST00000476772 PGAP2Q9UHJ9 254 aa33.61■■■□□ 2.97
VEGFA-211ENST00000476772 HERC5Q9UII4 1024 aaKnown RBP33.61■■■□□ 2.97
VEGFA-211ENST00000476772 HACL1Q9UJ83 578 aa33.61■■■□□ 2.97
VEGFA-211ENST00000476772 PDIA4P13667 645 aaKnown RBP33.6■■■□□ 2.97
VEGFA-211ENST00000476772 IFNAR1P17181 557 aa33.6■■■□□ 2.97
VEGFA-211ENST00000476772 EPS15P42566 896 aa33.6■■■□□ 2.97
VEGFA-211ENST00000476772 TNFAIP1Q13829 316 aa33.59■■■□□ 2.97
VEGFA-211ENST00000476772 RASA3Q14644 834 aa33.59■■■□□ 2.97
VEGFA-211ENST00000476772 CDC37L1Q7L3B6 337 aa33.59■■■□□ 2.97
VEGFA-211ENST00000476772 CLEC10AQ8IUN9 316 aa33.59■■■□□ 2.97
VEGFA-211ENST00000476772 XPO5Q9HAV4 1204 aaKnown RBP eCLIP33.59■■■□□ 2.973e-7■■■■■ 34.2
VEGFA-211ENST00000476772 RBM28Q9NW13 759 aaKnown RBP33.59■■■□□ 2.97
VEGFA-211ENST00000476772 FOSBP53539 338 aa33.58■■■□□ 2.97
VEGFA-211ENST00000476772 CMTR1Q8N1G2 835 aaKnown RBP33.58■■■□□ 2.97
VEGFA-211ENST00000476772 CTCFLQ8NI51 663 aaPredicted RBP33.58■■■□□ 2.97
VEGFA-211ENST00000476772 SOCS7O14512 581 aa33.58■■■□□ 2.97
VEGFA-211ENST00000476772 F13A1P00488 732 aa33.58■■■□□ 2.97
VEGFA-211ENST00000476772 TOP1P11387 765 aaKnown RBP33.58■■■□□ 2.97
VEGFA-211ENST00000476772 SHROOM1Q2M3G4 852 aaPredicted RBP33.58■■■□□ 2.97
VEGFA-211ENST00000476772 GBP4Q96PP9 640 aa33.58■■■□□ 2.97
VEGFA-211ENST00000476772 STK36Q9NRP7 1315 aa33.57■■■□□ 2.96
VEGFA-211ENST00000476772 CLEC17AQ6ZS10 378 aa33.57■■■□□ 2.96
VEGFA-211ENST00000476772 SLC26A6Q9BXS9 759 aa33.57■■■□□ 2.96
VEGFA-211ENST00000476772 PLEKHA8P1O95397 391 aa33.56■■■□□ 2.96
VEGFA-211ENST00000476772 BAG4O95429 457 aaKnown RBP33.56■■■□□ 2.96
VEGFA-211ENST00000476772 FMNL1O95466 1100 aaPredicted RBP33.56■■■□□ 2.96
VEGFA-211ENST00000476772 SSRP1Q08945 709 aaKnown RBP33.56■■■□□ 2.96
VEGFA-211ENST00000476772 NBPF11Q86T75 865 aa33.56■■■□□ 2.96
VEGFA-211ENST00000476772 CCDC82Q8N4S0 544 aa33.56■■■□□ 2.96
VEGFA-211ENST00000476772 H3BQV1 296 aa33.55■■■□□ 2.96
VEGFA-211ENST00000476772 GRIN3BO60391 1043 aa33.55■■■□□ 2.96
VEGFA-211ENST00000476772 GDF11O95390 407 aa33.55■■■□□ 2.96
VEGFA-211ENST00000476772 NBR1Q14596 966 aa33.55■■■□□ 2.96
VEGFA-211ENST00000476772 IFFO2Q5TF58 517 aa33.55■■■□□ 2.96
VEGFA-211ENST00000476772 MAP3K14Q99558 947 aa33.55■■■□□ 2.96
VEGFA-211ENST00000476772 TTLL1O95922 423 aa33.55■■■□□ 2.96
VEGFA-211ENST00000476772 RRP1BQ14684 758 aaKnown RBP33.55■■■□□ 2.96
VEGFA-211ENST00000476772 TMTC3Q6ZXV5 915 aa33.55■■■□□ 2.96
VEGFA-211ENST00000476772 MTMR7Q9Y216 660 aa33.55■■■□□ 2.96
VEGFA-211ENST00000476772 MCM4P33991 863 aa33.54■■■□□ 2.96
VEGFA-211ENST00000476772 GRM4Q14833 912 aa33.54■■■□□ 2.96
VEGFA-211ENST00000476772 ABCB5Q2M3G0 1257 aa33.54■■■□□ 2.96
VEGFA-211ENST00000476772 TEPSINQ96N21 525 aa33.54■■■□□ 2.96
VEGFA-211ENST00000476772 TBC1D12O60347 775 aa33.53■■■□□ 2.96
VEGFA-211ENST00000476772 LMOD1P29536 600 aaPredicted RBP33.53■■■□□ 2.96
VEGFA-211ENST00000476772 KIF5BP33176 963 aa33.53■■■□□ 2.96
VEGFA-211ENST00000476772 HIRAP54198 1017 aaPredicted RBP33.53■■■□□ 2.96
VEGFA-211ENST00000476772 ANGEL2Q5VTE6 544 aaKnown RBP33.53■■■□□ 2.96
VEGFA-211ENST00000476772 CHAMP1Q96JM3 812 aa33.53■■■□□ 2.96
VEGFA-211ENST00000476772 CLIP2Q9UDT6 1046 aa33.53■■■□□ 2.96
VEGFA-211ENST00000476772 UBE2Q2LH0YL09 131 aa33.52■■■□□ 2.96
VEGFA-211ENST00000476772 FUT2Q10981 343 aa33.52■■■□□ 2.96
VEGFA-211ENST00000476772 TMEM179Q6ZVK1 233 aa33.52■■■□□ 2.96
VEGFA-211ENST00000476772 MIGA2Q7L4E1 593 aa33.52■■■□□ 2.96
VEGFA-211ENST00000476772 TRIM22Q8IYM9 498 aa33.52■■■□□ 2.96
VEGFA-211ENST00000476772 LRRC47Q8N1G4 583 aaKnown RBP33.52■■■□□ 2.96
VEGFA-211ENST00000476772 AIFM3Q96NN9 605 aa33.52■■■□□ 2.96
VEGFA-211ENST00000476772 MYH4Q9Y623 1939 aa33.52■■■□□ 2.96
VEGFA-211ENST00000476772 C8orf76Q96K31 380 aa33.52■■■□□ 2.96
VEGFA-211ENST00000476772 ALG1Q9BT22 464 aa33.52■■■□□ 2.96
VEGFA-211ENST00000476772 GUCY1A2P33402 732 aa33.51■■■□□ 2.95
VEGFA-211ENST00000476772 JAG1P78504 1218 aa33.51■■■□□ 2.95
VEGFA-211ENST00000476772 GUCY1B3Q02153 619 aa33.51■■■□□ 2.95
VEGFA-211ENST00000476772 SEPT2Q15019 361 aa33.51■■■□□ 2.95
VEGFA-211ENST00000476772 RASGRP2Q7LDG7 609 aa33.51■■■□□ 2.95
VEGFA-211ENST00000476772 FERMT3Q86UX7 667 aa33.51■■■□□ 2.95
VEGFA-211ENST00000476772 APOBEC3FQ8IUX4 373 aaKnown RBP33.51■■■□□ 2.95
VEGFA-211ENST00000476772 DEFB129Q9H1M3 183 aa33.51■■■□□ 2.95
VEGFA-211ENST00000476772 MAD2L2Q9UI95 211 aa33.51■■■□□ 2.95
VEGFA-211ENST00000476772 FOXD4L6Q3SYB3 417 aaPredicted RBP33.5■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms