RNA–Protein interactions for RNA: ENST00000476640.1

HMGCS2-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 3

Gene HMGCS2, Length 857 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-203ENST00000476640 ERVK-9P63128 1117 aa16.2■□□□□ 0.18
HMGCS2-203ENST00000476640 ERVK-24P63145 666 aa16.2■□□□□ 0.18
HMGCS2-203ENST00000476640 CCNA1P78396 465 aa16.2■□□□□ 0.18
HMGCS2-203ENST00000476640 USP17L24Q0WX57 530 aa16.2■□□□□ 0.18
HMGCS2-203ENST00000476640 CHRDL2Q6WN34 429 aa16.2■□□□□ 0.18
HMGCS2-203ENST00000476640 NECAB2Q7Z6G3 386 aa16.2■□□□□ 0.18
HMGCS2-203ENST00000476640 C12orf42Q96LP6 360 aa16.2■□□□□ 0.18
HMGCS2-203ENST00000476640 DNAJC2Q99543 621 aaKnown RBP16.2■□□□□ 0.18
HMGCS2-203ENST00000476640 RIOK1Q9BRS2 568 aaKnown RBP16.2■□□□□ 0.18
HMGCS2-203ENST00000476640 KIAA1683Q9H0B3 1180 aa16.2■□□□□ 0.18
HMGCS2-203ENST00000476640 EMILIN3Q9NT22 766 aa16.2■□□□□ 0.18
HMGCS2-203ENST00000476640 GOLIM4O00461 696 aa16.19■□□□□ 0.18
HMGCS2-203ENST00000476640 SHROOM1Q2M3G4 852 aaPredicted RBP16.19■□□□□ 0.18
HMGCS2-203ENST00000476640 PAGR1Q9BTK6 254 aa16.19■□□□□ 0.18
HMGCS2-203ENST00000476640 TXNRD2Q9NNW7 524 aa16.19■□□□□ 0.18
HMGCS2-203ENST00000476640 ZBTB40Q9NUA8 1239 aa16.19■□□□□ 0.18
HMGCS2-203ENST00000476640 RBPJLQ9UBG7 517 aa16.19■□□□□ 0.18
HMGCS2-203ENST00000476640 COG6Q9Y2V7 657 aa16.19■□□□□ 0.18
HMGCS2-203ENST00000476640 RABGAP1Q9Y3P9 1069 aa16.19■□□□□ 0.18
HMGCS2-203ENST00000476640 ZKSCAN1P17029 563 aaPredicted RBP16.18■□□□□ 0.18
HMGCS2-203ENST00000476640 CYP2B6P20813 491 aa16.18■□□□□ 0.18
HMGCS2-203ENST00000476640 RGS2P41220 211 aa16.18■□□□□ 0.18
HMGCS2-203ENST00000476640 ZYXQ15942 572 aaKnown RBP16.18■□□□□ 0.18
HMGCS2-203ENST00000476640 PLEKHH3Q7Z736 793 aa16.18■□□□□ 0.18
HMGCS2-203ENST00000476640 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.18■□□□□ 0.18
HMGCS2-203ENST00000476640 MCM9Q9NXL9 1143 aa16.18■□□□□ 0.18
HMGCS2-203ENST00000476640 ZNF532Q9HCE3 1301 aa16.18■□□□□ 0.18
HMGCS2-203ENST00000476640 SHMT1P34896 483 aa16.17■□□□□ 0.18
HMGCS2-203ENST00000476640 GPR142Q7Z601 462 aa16.17■□□□□ 0.18
HMGCS2-203ENST00000476640 AMOTL1Q8IY63 956 aa16.17■□□□□ 0.18
HMGCS2-203ENST00000476640 TRIB2Q92519 343 aa16.17■□□□□ 0.18
HMGCS2-203ENST00000476640 PAWRQ96IZ0 340 aaKnown RBP16.17■□□□□ 0.18
HMGCS2-203ENST00000476640 RCAN3Q9UKA8 241 aa16.17■□□□□ 0.18
HMGCS2-203ENST00000476640 FRMPD3Q5JV73 1810 aa16.17■□□□□ 0.18
HMGCS2-203ENST00000476640 PRKAR2AP13861 404 aaKnown RBP16.16■□□□□ 0.18
HMGCS2-203ENST00000476640 VCAM1P19320 739 aa16.16■□□□□ 0.18
HMGCS2-203ENST00000476640 PLCD1P51178 756 aa16.16■□□□□ 0.18
HMGCS2-203ENST00000476640 CATSPERGQ6ZRH7 1159 aa16.16■□□□□ 0.18
HMGCS2-203ENST00000476640 DDRGK1Q96HY6 314 aa16.16■□□□□ 0.18
HMGCS2-203ENST00000476640 APBA2Q99767 749 aa16.16■□□□□ 0.18
HMGCS2-203ENST00000476640 NBPF3Q9H094 633 aa16.16■□□□□ 0.18
HMGCS2-203ENST00000476640 BCL11AQ9H165 835 aa16.16■□□□□ 0.18
HMGCS2-203ENST00000476640 PAG1Q9NWQ8 432 aa16.16■□□□□ 0.18
HMGCS2-203ENST00000476640 SWAP70Q9UH65 585 aa16.16■□□□□ 0.18
HMGCS2-203ENST00000476640 IVNS1ABPQ9Y6Y0 642 aa16.16■□□□□ 0.18
HMGCS2-203ENST00000476640 MPHOSPH10O00566 681 aaKnown RBP16.15■□□□□ 0.18
HMGCS2-203ENST00000476640 ATP5JP18859 108 aa16.15■□□□□ 0.18
HMGCS2-203ENST00000476640 Q3C1V9 767 aa16.15■□□□□ 0.18
HMGCS2-203ENST00000476640 MAP3K21Q5TCX8 1036 aa16.15■□□□□ 0.18
HMGCS2-203ENST00000476640 LBX2Q6XYB7 198 aa16.15■□□□□ 0.18
HMGCS2-203ENST00000476640 SIRT2Q8IXJ6 389 aa16.15■□□□□ 0.18
HMGCS2-203ENST00000476640 PORCNQ9H237 461 aa16.15■□□□□ 0.18
HMGCS2-203ENST00000476640 ATP8A2Q9NTI2 1148 aa16.15■□□□□ 0.18
HMGCS2-203ENST00000476640 A0A1W2PPC1 479 aa16.14■□□□□ 0.17
HMGCS2-203ENST00000476640 TCRBV5S4A2TA0A5A2 114 aa16.14■□□□□ 0.17
HMGCS2-203ENST00000476640 GABPAQ06546 454 aa16.14■□□□□ 0.17
HMGCS2-203ENST00000476640 TRIM32Q13049 653 aa16.14■□□□□ 0.17
HMGCS2-203ENST00000476640 MORN1Q5T089 497 aa16.14■□□□□ 0.17
HMGCS2-203ENST00000476640 WDR78Q5VTH9 848 aa16.14■□□□□ 0.17
HMGCS2-203ENST00000476640 ZSCAN25Q6NSZ9 544 aa16.14■□□□□ 0.17
HMGCS2-203ENST00000476640 ACER1Q8TDN7 264 aa16.14■□□□□ 0.17
HMGCS2-203ENST00000476640 USP6NLQ92738 828 aa16.14■□□□□ 0.17
HMGCS2-203ENST00000476640 RPAP3Q9H6T3 665 aaPredicted RBP16.14■□□□□ 0.17
HMGCS2-203ENST00000476640 SH2D4AQ9H788 454 aa16.14■□□□□ 0.17
HMGCS2-203ENST00000476640 DCP1AQ9NPI6 582 aaPredicted RBP16.14■□□□□ 0.17
HMGCS2-203ENST00000476640 RBM27Q9P2N5 1060 aaKnown RBP16.14■□□□□ 0.17
HMGCS2-203ENST00000476640 SLC15A5A6NIM6 579 aa16.13■□□□□ 0.17
HMGCS2-203ENST00000476640 PEX10O60683 326 aa16.13■□□□□ 0.17
HMGCS2-203ENST00000476640 MAP2K5Q13163 448 aa16.13■□□□□ 0.17
HMGCS2-203ENST00000476640 SEPT2Q15019 361 aa16.13■□□□□ 0.17
HMGCS2-203ENST00000476640 TMEM179Q6ZVK1 233 aa16.13■□□□□ 0.17
HMGCS2-203ENST00000476640 LCORLQ8N3X6 602 aa16.13■□□□□ 0.17
HMGCS2-203ENST00000476640 SDR42E1Q8WUS8 393 aa16.13■□□□□ 0.17
HMGCS2-203ENST00000476640 EDC3Q96F86 508 aaKnown RBP16.13■□□□□ 0.17
HMGCS2-203ENST00000476640 HAUS7Q99871 368 aa16.13■□□□□ 0.17
HMGCS2-203ENST00000476640 LRRCC1Q9C099 1032 aa16.13■□□□□ 0.17
HMGCS2-203ENST00000476640 BOLA2Q9H3K6 86 aa16.13■□□□□ 0.17
HMGCS2-203ENST00000476640 HOXC10Q9NYD6 342 aa16.13■□□□□ 0.17
HMGCS2-203ENST00000476640 OGDHLQ9ULD0 1010 aa16.13■□□□□ 0.17
HMGCS2-203ENST00000476640 ZNFX1Q9P2E3 1918 aaKnown RBP16.13■□□□□ 0.17
HMGCS2-203ENST00000476640 PARP14Q460N5 1801 aa16.12■□□□□ 0.17
HMGCS2-203ENST00000476640 ZNF236Q9UL36 1845 aa16.12■□□□□ 0.17
HMGCS2-203ENST00000476640 RLFQ13129 1914 aa16.12■□□□□ 0.17
HMGCS2-203ENST00000476640 A0A0G2JMZ2 1700 aa16.12■□□□□ 0.17
HMGCS2-203ENST00000476640 MBD4O95243 580 aa16.12■□□□□ 0.17
HMGCS2-203ENST00000476640 ADD2P35612 726 aa16.12■□□□□ 0.17
HMGCS2-203ENST00000476640 CACNB2Q08289 660 aaPredicted RBP16.12■□□□□ 0.17
HMGCS2-203ENST00000476640 MFSD14CQ5VZR4 134 aa16.12■□□□□ 0.17
HMGCS2-203ENST00000476640 DIS3LQ8TF46 1054 aaKnown RBP16.12■□□□□ 0.17
HMGCS2-203ENST00000476640 C11orf49Q9H6J7 331 aa16.12■□□□□ 0.17
HMGCS2-203ENST00000476640 ARMT1Q9H993 441 aa16.12■□□□□ 0.17
HMGCS2-203ENST00000476640 ARHGEF10LQ9HCE6 1279 aa16.12■□□□□ 0.17
HMGCS2-203ENST00000476640 SPDYE16A6NNV3 312 aaPredicted RBP16.11■□□□□ 0.17
HMGCS2-203ENST00000476640 CNMDO75829 334 aa16.11■□□□□ 0.17
HMGCS2-203ENST00000476640 GUCY1A2P33402 732 aa16.11■□□□□ 0.17
HMGCS2-203ENST00000476640 COG2Q14746 738 aa16.11■□□□□ 0.17
HMGCS2-203ENST00000476640 UBE3CQ15386 1083 aa16.11■□□□□ 0.17
HMGCS2-203ENST00000476640 LPAR1Q92633 364 aa16.11■□□□□ 0.17
HMGCS2-203ENST00000476640 CCDC17Q96LX7 622 aa16.11■□□□□ 0.17
HMGCS2-203ENST00000476640 TANGO6Q9C0B7 1094 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms