RNA–Protein interactions for RNA: ENST00000476544.1

RAB5A-208, Transcript of RAB5A, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5A, Length 532 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-208ENST00000476544 USP17L2Q6R6M4 530 aa16.35■□□□□ 0.21
RAB5A-208ENST00000476544 NKX2-3Q8TAU0 364 aa16.35■□□□□ 0.21
RAB5A-208ENST00000476544 TRIM47Q96LD4 638 aa16.35■□□□□ 0.21
RAB5A-208ENST00000476544 C12orf42Q96LP6 360 aa16.35■□□□□ 0.21
RAB5A-208ENST00000476544 CCDC17Q96LX7 622 aa16.35■□□□□ 0.21
RAB5A-208ENST00000476544 PARK7Q99497 189 aaKnown RBP16.35■□□□□ 0.21
RAB5A-208ENST00000476544 IL25Q9H293 177 aa16.35■□□□□ 0.21
RAB5A-208ENST00000476544 EFCC1Q9HA90 598 aa16.35■□□□□ 0.21
RAB5A-208ENST00000476544 ARPP21Q9UBL0 812 aaPredicted RBP16.35■□□□□ 0.21
RAB5A-208ENST00000476544 HPS5Q9UPZ3 1129 aa16.35■□□□□ 0.21
RAB5A-208ENST00000476544 PTPN22Q9Y2R2 807 aa16.35■□□□□ 0.21
RAB5A-208ENST00000476544 HTTP42858 3142 aa16.34■□□□□ 0.21
RAB5A-208ENST00000476544 LAMB1P07942 1786 aa16.34■□□□□ 0.21
RAB5A-208ENST00000476544 CDK5RAP2Q96SN8 1893 aa16.34■□□□□ 0.21
RAB5A-208ENST00000476544 FGAP02671 866 aa16.34■□□□□ 0.21
RAB5A-208ENST00000476544 FBXO46Q6PJ61 603 aaPredicted RBP16.34■□□□□ 0.21
RAB5A-208ENST00000476544 TMEM179Q6ZVK1 233 aa16.34■□□□□ 0.21
RAB5A-208ENST00000476544 TXNRD2Q9NNW7 524 aa16.34■□□□□ 0.21
RAB5A-208ENST00000476544 RBPJLQ9UBG7 517 aa16.34■□□□□ 0.21
RAB5A-208ENST00000476544 IGKV6D-41A0A0C4DH26 115 aa16.33■□□□□ 0.2
RAB5A-208ENST00000476544 MPHOSPH10O00566 681 aaKnown RBP16.33■□□□□ 0.2
RAB5A-208ENST00000476544 PRDM1O75626 825 aa16.33■□□□□ 0.2
RAB5A-208ENST00000476544 HSPD1P10809 573 aaKnown RBP16.33■□□□□ 0.2
RAB5A-208ENST00000476544 PSMC4P43686 418 aa16.33■□□□□ 0.2
RAB5A-208ENST00000476544 ZYXQ15942 572 aaKnown RBP16.33■□□□□ 0.2
RAB5A-208ENST00000476544 Q3C1V9 767 aa16.33■□□□□ 0.2
RAB5A-208ENST00000476544 TTC22Q5TAA0 569 aa16.33■□□□□ 0.2
RAB5A-208ENST00000476544 CATSPERGQ6ZRH7 1159 aa16.33■□□□□ 0.2
RAB5A-208ENST00000476544 DDRGK1Q96HY6 314 aa16.33■□□□□ 0.2
RAB5A-208ENST00000476544 TMX2Q9Y320 296 aa16.33■□□□□ 0.2
RAB5A-208ENST00000476544 FOCADQ5VW36 1801 aa16.33■□□□□ 0.2
RAB5A-208ENST00000476544 FGRP09769 529 aa16.32■□□□□ 0.2
RAB5A-208ENST00000476544 EEF2P13639 858 aaKnown RBP16.32■□□□□ 0.2
RAB5A-208ENST00000476544 TDO2P48775 406 aa16.32■□□□□ 0.2
RAB5A-208ENST00000476544 PPARAQ07869 468 aa16.32■□□□□ 0.2
RAB5A-208ENST00000476544 DDX60LQ5H9U9 1706 aaKnown RBP16.32■□□□□ 0.2
RAB5A-208ENST00000476544 ANKRD13CQ8N6S4 541 aa16.32■□□□□ 0.2
RAB5A-208ENST00000476544 PHIPQ8WWQ0 1821 aa16.32■□□□□ 0.2
RAB5A-208ENST00000476544 TMOD4Q9NZQ9 345 aa16.32■□□□□ 0.2
RAB5A-208ENST00000476544 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.32■□□□□ 0.2
RAB5A-208ENST00000476544 ROBO3Q96MS0 1386 aa16.31■□□□□ 0.2
RAB5A-208ENST00000476544 CCDC85CA6NKD9 419 aa16.31■□□□□ 0.2
RAB5A-208ENST00000476544 CNMDO75829 334 aa16.31■□□□□ 0.2
RAB5A-208ENST00000476544 VCAM1P19320 739 aa16.31■□□□□ 0.2
RAB5A-208ENST00000476544 OSBPP22059 807 aa16.31■□□□□ 0.2
RAB5A-208ENST00000476544 CTDSPL2Q05D32 466 aa16.31■□□□□ 0.2
RAB5A-208ENST00000476544 CWC27Q6UX04 472 aaKnown RBP16.31■□□□□ 0.2
RAB5A-208ENST00000476544 NBPF3Q9H094 633 aa16.31■□□□□ 0.2
RAB5A-208ENST00000476544 ANAPC4Q9UJX5 808 aa16.31■□□□□ 0.2
RAB5A-208ENST00000476544 HERVK_113P62684 666 aa16.3■□□□□ 0.2
RAB5A-208ENST00000476544 AMOTL1Q8IY63 956 aa16.3■□□□□ 0.2
RAB5A-208ENST00000476544 NACAP1Q9BZK3 213 aa16.3■□□□□ 0.2
RAB5A-208ENST00000476544 NAPBQ9H115 298 aa16.3■□□□□ 0.2
RAB5A-208ENST00000476544 KANSL2Q9H9L4 492 aa16.3■□□□□ 0.2
RAB5A-208ENST00000476544 MORF4L1Q9UBU8 362 aa16.3■□□□□ 0.2
RAB5A-208ENST00000476544 GABRQQ9UN88 632 aa16.3■□□□□ 0.2
RAB5A-208ENST00000476544 PTCH2Q9Y6C5 1203 aa16.3■□□□□ 0.2
RAB5A-208ENST00000476544 USP17L15C9J2P7 530 aa16.29■□□□□ 0.2
RAB5A-208ENST00000476544 USP17L13C9JLJ4 530 aa16.29■□□□□ 0.2
RAB5A-208ENST00000476544 USP17L11C9JVI0 530 aa16.29■□□□□ 0.2
RAB5A-208ENST00000476544 USP17L18D6R9N7 530 aa16.29■□□□□ 0.2
RAB5A-208ENST00000476544 USP17L22D6RA61 530 aa16.29■□□□□ 0.2
RAB5A-208ENST00000476544 USP17L17D6RBQ6 530 aa16.29■□□□□ 0.2
RAB5A-208ENST00000476544 USP17L19D6RCP7 530 aa16.29■□□□□ 0.2
RAB5A-208ENST00000476544 USP17L20D6RJB6 530 aa16.29■□□□□ 0.2
RAB5A-208ENST00000476544 USP17L24Q0WX57 530 aa16.29■□□□□ 0.2
RAB5A-208ENST00000476544 FAM47AQ5JRC9 791 aa16.29■□□□□ 0.2
RAB5A-208ENST00000476544 SMCR8Q8TEV9 937 aaPredicted RBP16.29■□□□□ 0.2
RAB5A-208ENST00000476544 FEZ1Q99689 392 aa16.29■□□□□ 0.2
RAB5A-208ENST00000476544 MKNK2Q9HBH9 465 aa16.29■□□□□ 0.2
RAB5A-208ENST00000476544 IL17RBQ9NRM6 502 aa16.29■□□□□ 0.2
RAB5A-208ENST00000476544 GJD2Q9UKL4 321 aa16.29■□□□□ 0.2
RAB5A-208ENST00000476544 DOCK1Q14185 1865 aa16.29■□□□□ 0.2
RAB5A-208ENST00000476544 CCDC171Q6TFL3 1326 aa16.28■□□□□ 0.2
RAB5A-208ENST00000476544 MYH1P12882 1939 aa16.28■□□□□ 0.2
RAB5A-208ENST00000476544 FMNL1O95466 1100 aaPredicted RBP16.28■□□□□ 0.2
RAB5A-208ENST00000476544 CHMLP26374 656 aa16.28■□□□□ 0.2
RAB5A-208ENST00000476544 GCLCP48506 637 aaPredicted RBP16.28■□□□□ 0.2
RAB5A-208ENST00000476544 USP14P54578 494 aa16.28■□□□□ 0.2
RAB5A-208ENST00000476544 ICA1Q05084 483 aa16.28■□□□□ 0.2
RAB5A-208ENST00000476544 PABPC4Q13310 644 aaKnown RBP eCLIP16.28■□□□□ 0.2
RAB5A-208ENST00000476544 FAM110CQ1W6H9 321 aa16.28■□□□□ 0.2
RAB5A-208ENST00000476544 ZNF444Q8N0Y2 327 aaPredicted RBP16.28■□□□□ 0.2
RAB5A-208ENST00000476544 NEDD1Q8NHV4 660 aa16.28■□□□□ 0.2
RAB5A-208ENST00000476544 MKL1Q969V6 931 aa16.28■□□□□ 0.2
RAB5A-208ENST00000476544 RPAP3Q9H6T3 665 aaPredicted RBP16.28■□□□□ 0.2
RAB5A-208ENST00000476544 VCPKMTQ9H867 229 aa16.28■□□□□ 0.2
RAB5A-208ENST00000476544 MTMR4Q9NYA4 1195 aa16.28■□□□□ 0.2
RAB5A-208ENST00000476544 NYAP2Q9P242 653 aa16.28■□□□□ 0.2
RAB5A-208ENST00000476544 SRRDQ9UH36 339 aa16.28■□□□□ 0.2
RAB5A-208ENST00000476544 PNMA3Q9UL41 463 aa16.28■□□□□ 0.2
RAB5A-208ENST00000476544 IRX3P78415 501 aaPredicted RBP16.27■□□□□ 0.2
RAB5A-208ENST00000476544 TFAP4Q01664 338 aa16.27■□□□□ 0.2
RAB5A-208ENST00000476544 SPICE1Q8N0Z3 855 aa16.27■□□□□ 0.2
RAB5A-208ENST00000476544 ARMC5Q96C12 935 aa16.27■□□□□ 0.2
RAB5A-208ENST00000476544 CEP95Q96GE4 821 aa16.27■□□□□ 0.2
RAB5A-208ENST00000476544 BTBD7Q9P203 1132 aa16.27■□□□□ 0.2
RAB5A-208ENST00000476544 GNRH1P01148 92 aa16.26■□□□□ 0.19
RAB5A-208ENST00000476544 NOVP48745 357 aa16.26■□□□□ 0.19
RAB5A-208ENST00000476544 RGS19P49795 217 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms