RNA–Protein interactions for RNA: ENST00000476466.1

SLC6A8-209, Transcript of solute carrier family 6 member 8, humanhuman

TSL 3

Gene SLC6A8, Length 470 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-209ENST00000476466 C12orf42Q96LP6 360 aa16.98■□□□□ 0.31
SLC6A8-209ENST00000476466 TMOD4Q9NZQ9 345 aa16.98■□□□□ 0.31
SLC6A8-209ENST00000476466 PNMA3Q9UL41 463 aa16.98■□□□□ 0.31
SLC6A8-209ENST00000476466 SUPT16HQ9Y5B9 1047 aaKnown RBP16.98■□□□□ 0.31
SLC6A8-209ENST00000476466 GREB1LQ9C091 1923 aaPredicted RBP16.98■□□□□ 0.31
SLC6A8-209ENST00000476466 C19orf81C9J6K1 198 aa16.97■□□□□ 0.31
SLC6A8-209ENST00000476466 GNRH1P01148 92 aa16.97■□□□□ 0.31
SLC6A8-209ENST00000476466 VCAM1P19320 739 aa16.97■□□□□ 0.31
SLC6A8-209ENST00000476466 EN2P19622 333 aaPredicted RBP16.97■□□□□ 0.31
SLC6A8-209ENST00000476466 CDK8P49336 464 aa16.97■□□□□ 0.31
SLC6A8-209ENST00000476466 FCGRTP55899 365 aa16.97■□□□□ 0.31
SLC6A8-209ENST00000476466 HERVK_113P62684 666 aa16.97■□□□□ 0.31
SLC6A8-209ENST00000476466 ARHGEF6Q15052 776 aa16.97■□□□□ 0.31
SLC6A8-209ENST00000476466 ZSCAN25Q6NSZ9 544 aa16.97■□□□□ 0.31
SLC6A8-209ENST00000476466 C16orf86Q6ZW13 317 aa16.97■□□□□ 0.31
SLC6A8-209ENST00000476466 SMC5Q8IY18 1101 aa16.97■□□□□ 0.31
SLC6A8-209ENST00000476466 LNPKQ9C0E8 428 aa16.97■□□□□ 0.31
SLC6A8-209ENST00000476466 KIAA1683Q9H0B3 1180 aa16.97■□□□□ 0.31
SLC6A8-209ENST00000476466 STAP2Q9UGK3 403 aa16.97■□□□□ 0.31
SLC6A8-209ENST00000476466 MPHOSPH10O00566 681 aaKnown RBP16.96■□□□□ 0.31
SLC6A8-209ENST00000476466 FLT3LGP49771 235 aa16.96■□□□□ 0.31
SLC6A8-209ENST00000476466 PDE1AP54750 535 aa16.96■□□□□ 0.31
SLC6A8-209ENST00000476466 IRX3P78415 501 aaPredicted RBP16.96■□□□□ 0.31
SLC6A8-209ENST00000476466 USP17L2Q6R6M4 530 aa16.96■□□□□ 0.31
SLC6A8-209ENST00000476466 GCC1Q96CN9 775 aa16.96■□□□□ 0.31
SLC6A8-209ENST00000476466 FEZ1Q99689 392 aa16.96■□□□□ 0.31
SLC6A8-209ENST00000476466 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.96■□□□□ 0.31
SLC6A8-209ENST00000476466 MORF4L1Q9UBU8 362 aa16.96■□□□□ 0.31
SLC6A8-209ENST00000476466 RLFQ13129 1914 aa16.96■□□□□ 0.3
SLC6A8-209ENST00000476466 ROBO3Q96MS0 1386 aa16.95■□□□□ 0.3
SLC6A8-209ENST00000476466 TNPO2O14787 897 aaKnown RBP16.95■□□□□ 0.3
SLC6A8-209ENST00000476466 ERC2O15083 957 aa16.95■□□□□ 0.3
SLC6A8-209ENST00000476466 CNMDO75829 334 aa16.95■□□□□ 0.3
SLC6A8-209ENST00000476466 GCLCP48506 637 aaPredicted RBP16.95■□□□□ 0.3
SLC6A8-209ENST00000476466 PRMT2P55345 433 aa16.95■□□□□ 0.3
SLC6A8-209ENST00000476466 IRX6P78412 446 aaPredicted RBP16.95■□□□□ 0.3
SLC6A8-209ENST00000476466 PABPC4Q13310 644 aaKnown RBP eCLIP16.95■□□□□ 0.3
SLC6A8-209ENST00000476466 ZMYM1Q5SVZ6 1142 aa16.95■□□□□ 0.3
SLC6A8-209ENST00000476466 CCDC129Q6ZRS4 1044 aa16.95■□□□□ 0.3
SLC6A8-209ENST00000476466 STK11IPQ8N1F8 1099 aa16.95■□□□□ 0.3
SLC6A8-209ENST00000476466 FSD1Q9BTV5 496 aa16.95■□□□□ 0.3
SLC6A8-209ENST00000476466 RBPJLQ9UBG7 517 aa16.95■□□□□ 0.3
SLC6A8-209ENST00000476466 SWAP70Q9UH65 585 aa16.95■□□□□ 0.3
SLC6A8-209ENST00000476466 ELNP15502 786 aa16.94■□□□□ 0.3
SLC6A8-209ENST00000476466 GRK4P32298 578 aa16.94■□□□□ 0.3
SLC6A8-209ENST00000476466 Q3C1V9 767 aa16.94■□□□□ 0.3
SLC6A8-209ENST00000476466 B4GALNT3Q6L9W6 998 aa16.94■□□□□ 0.3
SLC6A8-209ENST00000476466 TMEM179Q6ZVK1 233 aa16.94■□□□□ 0.3
SLC6A8-209ENST00000476466 RAET1EQ8TD07 263 aa16.94■□□□□ 0.3
SLC6A8-209ENST00000476466 SHISA4Q96DD7 197 aa16.94■□□□□ 0.3
SLC6A8-209ENST00000476466 PORCNQ9H237 461 aa16.94■□□□□ 0.3
SLC6A8-209ENST00000476466 CABP5Q9NP86 173 aa16.94■□□□□ 0.3
SLC6A8-209ENST00000476466 A0A0G2JMZ2 1700 aa16.93■□□□□ 0.3
SLC6A8-209ENST00000476466 ZFYP08048 801 aaPredicted RBP16.93■□□□□ 0.3
SLC6A8-209ENST00000476466 SBK1Q52WX2 424 aa16.93■□□□□ 0.3
SLC6A8-209ENST00000476466 RPAP3Q9H6T3 665 aaPredicted RBP16.93■□□□□ 0.3
SLC6A8-209ENST00000476466 ARPP21Q9UBL0 812 aaPredicted RBP16.93■□□□□ 0.3
SLC6A8-209ENST00000476466 GJD2Q9UKL4 321 aa16.93■□□□□ 0.3
SLC6A8-209ENST00000476466 RANBP2P49792 3224 aaKnown RBP16.92■□□□□ 0.3
SLC6A8-209ENST00000476466 PARP14Q460N5 1801 aa16.92■□□□□ 0.3
SLC6A8-209ENST00000476466 RASA1P20936 1047 aa16.92■□□□□ 0.3
SLC6A8-209ENST00000476466 HOXD10P28358 340 aa16.92■□□□□ 0.3
SLC6A8-209ENST00000476466 ERVK-9P63128 1117 aa16.92■□□□□ 0.3
SLC6A8-209ENST00000476466 ERVK-24P63145 666 aa16.92■□□□□ 0.3
SLC6A8-209ENST00000476466 ICA1Q05084 483 aa16.92■□□□□ 0.3
SLC6A8-209ENST00000476466 CATSPERGQ6ZRH7 1159 aa16.92■□□□□ 0.3
SLC6A8-209ENST00000476466 PAGR1Q9BTK6 254 aa16.92■□□□□ 0.3
SLC6A8-209ENST00000476466 DNAH12Q6ZR08 3092 aa16.92■□□□□ 0.3
SLC6A8-209ENST00000476466 SPDYE16A6NNV3 312 aaPredicted RBP16.91■□□□□ 0.3
SLC6A8-209ENST00000476466 USP17L15C9J2P7 530 aa16.91■□□□□ 0.3
SLC6A8-209ENST00000476466 USP17L13C9JLJ4 530 aa16.91■□□□□ 0.3
SLC6A8-209ENST00000476466 USP17L11C9JVI0 530 aa16.91■□□□□ 0.3
SLC6A8-209ENST00000476466 USP17L18D6R9N7 530 aa16.91■□□□□ 0.3
SLC6A8-209ENST00000476466 USP17L22D6RA61 530 aa16.91■□□□□ 0.3
SLC6A8-209ENST00000476466 USP17L17D6RBQ6 530 aa16.91■□□□□ 0.3
SLC6A8-209ENST00000476466 USP17L19D6RCP7 530 aa16.91■□□□□ 0.3
SLC6A8-209ENST00000476466 USP17L20D6RJB6 530 aa16.91■□□□□ 0.3
SLC6A8-209ENST00000476466 ADCY3O60266 1144 aa16.91■□□□□ 0.3
SLC6A8-209ENST00000476466 USP14P54578 494 aa16.91■□□□□ 0.3
SLC6A8-209ENST00000476466 USP17L24Q0WX57 530 aa16.91■□□□□ 0.3
SLC6A8-209ENST00000476466 AAMPQ13685 434 aa16.91■□□□□ 0.3
SLC6A8-209ENST00000476466 VPS53Q5VIR6 699 aa16.91■□□□□ 0.3
SLC6A8-209ENST00000476466 GIMAP6Q6P9H5 292 aa16.91■□□□□ 0.3
SLC6A8-209ENST00000476466 NBPF11Q86T75 865 aa16.91■□□□□ 0.3
SLC6A8-209ENST00000476466 BTBD7Q9P203 1132 aa16.91■□□□□ 0.3
SLC6A8-209ENST00000476466 TACC3Q9Y6A5 838 aa16.91■□□□□ 0.3
SLC6A8-209ENST00000476466 A0A0D9SFI3 127 aa16.9■□□□□ 0.3
SLC6A8-209ENST00000476466 MINDY4BA8MYZ0 360 aa16.9■□□□□ 0.3
SLC6A8-209ENST00000476466 PRDM1O75626 825 aa16.9■□□□□ 0.3
SLC6A8-209ENST00000476466 NUCB1Q02818 461 aa16.9■□□□□ 0.3
SLC6A8-209ENST00000476466 TRIM32Q13049 653 aa16.9■□□□□ 0.3
SLC6A8-209ENST00000476466 IRF5Q13568 498 aa16.9■□□□□ 0.3
SLC6A8-209ENST00000476466 SPICE1Q8N0Z3 855 aa16.9■□□□□ 0.3
SLC6A8-209ENST00000476466 SLAIN1Q8ND83 568 aa16.9■□□□□ 0.3
SLC6A8-209ENST00000476466 FAM227BQ96M60 508 aa16.9■□□□□ 0.3
SLC6A8-209ENST00000476466 TMX2Q9Y320 296 aa16.9■□□□□ 0.3
SLC6A8-209ENST00000476466 INHAP05111 366 aa16.89■□□□□ 0.29
SLC6A8-209ENST00000476466 CCL5P13501 91 aa16.89■□□□□ 0.29
SLC6A8-209ENST00000476466 EEF2P13639 858 aaKnown RBP16.89■□□□□ 0.29
SLC6A8-209ENST00000476466 TDO2P48775 406 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms