RNA–Protein interactions for RNA: ENST00000475970.1

TRA2A-205, Transcript of transformer 2 alpha homolog, humanhuman

TSL 2

Gene TRA2A, Length 394 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-205ENST00000475970 GMIPQ9P107 970 aa6.1□□□□□ -1.43
TRA2A-205ENST00000475970 PPT2Q9UMR5 302 aa6.1□□□□□ -1.43
TRA2A-205ENST00000475970 CYP26A1O43174 497 aa6.09□□□□□ -1.43
TRA2A-205ENST00000475970 HOXA10P31260 410 aaPredicted RBP6.09□□□□□ -1.43
TRA2A-205ENST00000475970 NASPP49321 788 aaPredicted RBP6.09□□□□□ -1.43
TRA2A-205ENST00000475970 GNL2Q13823 731 aaKnown RBP6.09□□□□□ -1.43
TRA2A-205ENST00000475970 ARSHQ5FYA8 562 aa6.09□□□□□ -1.43
TRA2A-205ENST00000475970 FBXW10Q5XX13 1052 aa6.09□□□□□ -1.43
TRA2A-205ENST00000475970 CDH24Q86UP0 819 aa6.09□□□□□ -1.43
TRA2A-205ENST00000475970 VSIG10LQ86VR7 867 aa6.09□□□□□ -1.43
TRA2A-205ENST00000475970 SEC16BQ96JE7 1060 aa6.09□□□□□ -1.43
TRA2A-205ENST00000475970 HEXIM2Q96MH2 286 aaKnown RBP6.09□□□□□ -1.43
TRA2A-205ENST00000475970 TINF2Q9BSI4 451 aa6.09□□□□□ -1.43
TRA2A-205ENST00000475970 LRRC4CQ9HCJ2 640 aa6.09□□□□□ -1.43
TRA2A-205ENST00000475970 ZNRF3Q9ULT6 936 aa6.09□□□□□ -1.43
TRA2A-205ENST00000475970 CNTNAP4Q9C0A0 1308 aa6.08□□□□□ -1.44
TRA2A-205ENST00000475970 IMPDH2P12268 514 aa6.08□□□□□ -1.44
TRA2A-205ENST00000475970 ATF4P18848 351 aaPredicted RBP6.08□□□□□ -1.44
TRA2A-205ENST00000475970 LRRFIP1Q32MZ4 808 aaKnown RBP6.08□□□□□ -1.44
TRA2A-205ENST00000475970 CDCP2Q5VXM1 449 aa6.08□□□□□ -1.44
TRA2A-205ENST00000475970 OVOS1Q6IE37 1185 aa6.08□□□□□ -1.44
TRA2A-205ENST00000475970 CCDC81Q6ZN84 652 aa6.08□□□□□ -1.44
TRA2A-205ENST00000475970 VPS37DQ86XT2 251 aa6.08□□□□□ -1.44
TRA2A-205ENST00000475970 TP53INP2Q8IXH6 220 aa6.08□□□□□ -1.44
TRA2A-205ENST00000475970 CYB5D2Q8WUJ1 264 aa6.08□□□□□ -1.44
TRA2A-205ENST00000475970 TMEM40Q8WWA1 233 aa6.08□□□□□ -1.44
TRA2A-205ENST00000475970 ATG4CQ96DT6 458 aa6.08□□□□□ -1.44
TRA2A-205ENST00000475970 KIF2CQ99661 725 aa6.08□□□□□ -1.44
TRA2A-205ENST00000475970 ADGRE2Q9UHX3 823 aa6.08□□□□□ -1.44
TRA2A-205ENST00000475970 TPX2Q9ULW0 747 aaKnown RBP6.08□□□□□ -1.44
TRA2A-205ENST00000475970 PHACTR4Q8IZ21 702 aa6.07□□□□□ -1.44
TRA2A-205ENST00000475970 ABI1Q8IZP0 508 aa6.07□□□□□ -1.44
TRA2A-205ENST00000475970 FAM181AQ8N9Y4 354 aa6.07□□□□□ -1.44
TRA2A-205ENST00000475970 AGBL5Q8NDL9 886 aa6.07□□□□□ -1.44
TRA2A-205ENST00000475970 DNAJB8Q8NHS0 232 aa6.07□□□□□ -1.44
TRA2A-205ENST00000475970 BAHD1Q8TBE0 780 aaPredicted RBP6.07□□□□□ -1.44
TRA2A-205ENST00000475970 PPP1R13LQ8WUF5 828 aa6.07□□□□□ -1.44
TRA2A-205ENST00000475970 CCDC74BQ96LY2 380 aa6.07□□□□□ -1.44
TRA2A-205ENST00000475970 CRBNQ96SW2 442 aa6.07□□□□□ -1.44
TRA2A-205ENST00000475970 KRTAP9-9Q9BYP9 154 aa6.07□□□□□ -1.44
TRA2A-205ENST00000475970 KRTAP9-4Q9BYQ2 154 aa6.07□□□□□ -1.44
TRA2A-205ENST00000475970 CNNM2Q9H8M5 875 aa6.07□□□□□ -1.44
TRA2A-205ENST00000475970 PRDM5Q9NQX1 630 aaPredicted RBP6.07□□□□□ -1.44
TRA2A-205ENST00000475970 GTF2IRD1Q9UHL9 959 aa6.07□□□□□ -1.44
TRA2A-205ENST00000475970 CEP131Q9UPN4 1083 aa6.07□□□□□ -1.44
TRA2A-205ENST00000475970 MEIS3P2A8K0S8 358 aa6.06□□□□□ -1.44
TRA2A-205ENST00000475970 RBAK-RBAKDNI3L0D1 243 aa6.06□□□□□ -1.44
TRA2A-205ENST00000475970 IGF2BP3O00425 579 aaKnown RBP eCLIP6.06□□□□□ -1.44
TRA2A-205ENST00000475970 RGS13O14921 159 aa6.06□□□□□ -1.44
TRA2A-205ENST00000475970 NME1P15531 152 aaKnown RBP6.06□□□□□ -1.44
TRA2A-205ENST00000475970 RAG1P15918 1043 aa6.06□□□□□ -1.44
TRA2A-205ENST00000475970 ZC3H6P61129 1189 aaKnown RBP6.06□□□□□ -1.44
TRA2A-205ENST00000475970 MSMPQ1L6U9 139 aa6.06□□□□□ -1.44
TRA2A-205ENST00000475970 NLRC3Q7RTR2 1065 aa6.06□□□□□ -1.44
TRA2A-205ENST00000475970 SLC43A3Q8NBI5 491 aa6.06□□□□□ -1.44
TRA2A-205ENST00000475970 RBBP8NLQ8NC74 664 aaPredicted RBP6.06□□□□□ -1.44
TRA2A-205ENST00000475970 CPLX3Q8WVH0 158 aa6.06□□□□□ -1.44
TRA2A-205ENST00000475970 SRRTQ9BXP5 876 aaKnown RBP6.06□□□□□ -1.44
TRA2A-205ENST00000475970 BSDC1Q9NW68 430 aaPredicted RBP6.06□□□□□ -1.44
TRA2A-205ENST00000475970 CCDC39Q9UFE4 941 aa6.06□□□□□ -1.44
TRA2A-205ENST00000475970 ZC3H7BQ9UGR2 993 aaKnown RBP6.06□□□□□ -1.44
TRA2A-205ENST00000475970 U3KQE9 123 aa6.06□□□□□ -1.44
TRA2A-205ENST00000475970 CYP7A1P22680 504 aa6.05□□□□□ -1.44
TRA2A-205ENST00000475970 POLR2BP30876 1174 aaKnown RBP6.05□□□□□ -1.44
TRA2A-205ENST00000475970 GBP1P32455 592 aa6.05□□□□□ -1.44
TRA2A-205ENST00000475970 ETV3P41162 512 aa6.05□□□□□ -1.44
TRA2A-205ENST00000475970 OXCT1P55809 520 aa6.05□□□□□ -1.44
TRA2A-205ENST00000475970 EIF6P56537 245 aaKnown RBP6.05□□□□□ -1.44
TRA2A-205ENST00000475970 ARID5AQ03989 594 aa6.05□□□□□ -1.44
TRA2A-205ENST00000475970 NAALADL2Q58DX5 795 aa6.05□□□□□ -1.44
TRA2A-205ENST00000475970 SFRP5Q5T4F7 317 aa6.05□□□□□ -1.44
TRA2A-205ENST00000475970 ZNF746Q6NUN9 644 aaPredicted RBP6.05□□□□□ -1.44
TRA2A-205ENST00000475970 ARHGAP27Q6ZUM4 889 aa6.05□□□□□ -1.44
TRA2A-205ENST00000475970 MAPK8IP1Q9UQF2 711 aa6.05□□□□□ -1.44
TRA2A-205ENST00000475970 PRR33A8MZF0 331 aa6.04□□□□□ -1.44
TRA2A-205ENST00000475970 UBOX5O94941 541 aa6.04□□□□□ -1.44
TRA2A-205ENST00000475970 PRNPP04156 253 aa6.04□□□□□ -1.44
TRA2A-205ENST00000475970 DNAJA1P31689 397 aaKnown RBP6.04□□□□□ -1.44
TRA2A-205ENST00000475970 GIPRP48546 466 aa6.04□□□□□ -1.44
TRA2A-205ENST00000475970 INTS3Q68E01 1043 aaKnown RBP6.04□□□□□ -1.44
TRA2A-205ENST00000475970 RUFY4Q6ZNE9 571 aa6.04□□□□□ -1.44
TRA2A-205ENST00000475970 LSRQ86X29 649 aaPredicted RBP6.04□□□□□ -1.44
TRA2A-205ENST00000475970 PLD6Q8N2A8 252 aaKnown RBP6.04□□□□□ -1.44
TRA2A-205ENST00000475970 ASIC4Q96FT7 647 aa6.04□□□□□ -1.44
TRA2A-205ENST00000475970 SLC9A7Q96T83 725 aa6.04□□□□□ -1.44
TRA2A-205ENST00000475970 MKNK2Q9HBH9 465 aa6.04□□□□□ -1.44
TRA2A-205ENST00000475970 GNAT3A8MTJ3 354 aa6.03□□□□□ -1.44
TRA2A-205ENST00000475970 TNFRSF10CO14798 259 aa6.03□□□□□ -1.44
TRA2A-205ENST00000475970 CBX7O95931 251 aa6.03□□□□□ -1.44
TRA2A-205ENST00000475970 ACRP10323 421 aa6.03□□□□□ -1.44
TRA2A-205ENST00000475970 ITIH2P19823 946 aa6.03□□□□□ -1.44
TRA2A-205ENST00000475970 FLCNQ8NFG4 579 aa6.03□□□□□ -1.44
TRA2A-205ENST00000475970 NETO1Q8TDF5 533 aa6.03□□□□□ -1.44
TRA2A-205ENST00000475970 SHDQ96IW2 340 aa6.03□□□□□ -1.44
TRA2A-205ENST00000475970 TM9SF2Q99805 663 aa6.03□□□□□ -1.44
TRA2A-205ENST00000475970 STRIP2Q9ULQ0 834 aa6.03□□□□□ -1.44
TRA2A-205ENST00000475970 PLAGL2Q9UPG8 496 aa6.03□□□□□ -1.44
TRA2A-205ENST00000475970 FAM86C2PA6NEL3 165 aa6.02□□□□□ -1.45
TRA2A-205ENST00000475970 SSBP05455 408 aaKnown RBP eCLIP6.02□□□□□ -1.45
TRA2A-205ENST00000475970 CEACAM5P06731 702 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms