RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 TACC3Q9Y6A5 838 aa14.29□□□□□ -0.12
MRPL55-227ENST00000475832 TNRC18O15417 2968 aaPredicted RBP14.29□□□□□ -0.12
MRPL55-227ENST00000475832 NAV1Q8NEY1 1877 aa14.29□□□□□ -0.12
MRPL55-227ENST00000475832 COL2A1P02458 1487 aaPredicted RBP14.28□□□□□ -0.12
MRPL55-227ENST00000475832 TCP10Q12799 353 aa14.28□□□□□ -0.12
MRPL55-227ENST00000475832 NFIAQ12857 509 aa14.28□□□□□ -0.12
MRPL55-227ENST00000475832 TNFAIP1Q13829 316 aa14.28□□□□□ -0.12
MRPL55-227ENST00000475832 RAB3GAP1Q15042 981 aa14.28□□□□□ -0.12
MRPL55-227ENST00000475832 SPDYE2Q495Y8 402 aa14.28□□□□□ -0.12
MRPL55-227ENST00000475832 TBC1D10BQ4KMP7 808 aaPredicted RBP14.28□□□□□ -0.12
MRPL55-227ENST00000475832 FAM47AQ5JRC9 791 aa14.28□□□□□ -0.12
MRPL55-227ENST00000475832 DGKHQ86XP1 1220 aa14.28□□□□□ -0.12
MRPL55-227ENST00000475832 FAM151AQ8WW52 585 aa14.28□□□□□ -0.12
MRPL55-227ENST00000475832 CCDC17Q96LX7 622 aa14.28□□□□□ -0.12
MRPL55-227ENST00000475832 VEZTQ9HBM0 779 aa14.28□□□□□ -0.12
MRPL55-227ENST00000475832 GPHNQ9NQX3 736 aaPredicted RBP14.28□□□□□ -0.12
MRPL55-227ENST00000475832 BRPF3Q9ULD4 1205 aa14.28□□□□□ -0.12
MRPL55-227ENST00000475832 LAMB1P07942 1786 aa14.27□□□□□ -0.12
MRPL55-227ENST00000475832 CA12O43570 354 aa14.27□□□□□ -0.13
MRPL55-227ENST00000475832 DDAH1O94760 285 aa14.27□□□□□ -0.13
MRPL55-227ENST00000475832 RASA1P20936 1047 aa14.27□□□□□ -0.13
MRPL55-227ENST00000475832 CACNB3P54284 484 aa14.27□□□□□ -0.13
MRPL55-227ENST00000475832 KIF4BQ2VIQ3 1234 aa14.27□□□□□ -0.13
MRPL55-227ENST00000475832 LARP1BQ659C4 914 aaKnown RBP14.27□□□□□ -0.13
MRPL55-227ENST00000475832 CYP4F22Q6NT55 531 aa14.27□□□□□ -0.13
MRPL55-227ENST00000475832 FAM83AQ86UY5 434 aa14.27□□□□□ -0.13
MRPL55-227ENST00000475832 MICU3Q86XE3 530 aa14.27□□□□□ -0.13
MRPL55-227ENST00000475832 ZNF654Q8IZM8 581 aa14.27□□□□□ -0.13
MRPL55-227ENST00000475832 ENAHQ8N8S7 591 aaPredicted RBP14.27□□□□□ -0.13
MRPL55-227ENST00000475832 NEDD1Q8NHV4 660 aa14.27□□□□□ -0.13
MRPL55-227ENST00000475832 RBM28Q9NW13 759 aaKnown RBP14.27□□□□□ -0.13
MRPL55-227ENST00000475832 FAM198AQ9UFP1 575 aa14.27□□□□□ -0.13
MRPL55-227ENST00000475832 ATP6V1DQ9Y5K8 247 aa14.27□□□□□ -0.13
MRPL55-227ENST00000475832 CLRN2A0PK11 232 aa14.26□□□□□ -0.13
MRPL55-227ENST00000475832 PTPDC1A2A3K4 754 aa14.26□□□□□ -0.13
MRPL55-227ENST00000475832 TCP10L2B9ZVM9 353 aa14.26□□□□□ -0.13
MRPL55-227ENST00000475832 SEC23AQ15436 765 aa14.26□□□□□ -0.13
MRPL55-227ENST00000475832 RTN1Q16799 776 aa14.26□□□□□ -0.13
MRPL55-227ENST00000475832 CTCFLQ8NI51 663 aaPredicted RBP14.26□□□□□ -0.13
MRPL55-227ENST00000475832 NUP133Q8WUM0 1156 aa14.26□□□□□ -0.13
MRPL55-227ENST00000475832 WASF1Q92558 559 aa14.26□□□□□ -0.13
MRPL55-227ENST00000475832 HERC5Q9UII4 1024 aaKnown RBP14.26□□□□□ -0.13
MRPL55-227ENST00000475832 PCDHAC2Q9Y5I4 1007 aa14.26□□□□□ -0.13
MRPL55-227ENST00000475832 ATRNL1Q5VV63 1379 aa14.25□□□□□ -0.13
MRPL55-227ENST00000475832 GOLGA6L22H0YM25 854 aa14.25□□□□□ -0.13
MRPL55-227ENST00000475832 H3BQV1 296 aa14.25□□□□□ -0.13
MRPL55-227ENST00000475832 SMIM22K7EJ46 135 aa14.25□□□□□ -0.13
MRPL55-227ENST00000475832 STX6O43752 255 aa14.25□□□□□ -0.13
MRPL55-227ENST00000475832 PTMSP20962 102 aa14.25□□□□□ -0.13
MRPL55-227ENST00000475832 KIF5BP33176 963 aa14.25□□□□□ -0.13
MRPL55-227ENST00000475832 MAP2K2P36507 400 aa14.25□□□□□ -0.13
MRPL55-227ENST00000475832 SOX10P56693 466 aa14.25□□□□□ -0.13
MRPL55-227ENST00000475832 GABPAQ06546 454 aa14.25□□□□□ -0.13
MRPL55-227ENST00000475832 RBM26Q5T8P6 1007 aaKnown RBP14.25□□□□□ -0.13
MRPL55-227ENST00000475832 CDC37L1Q7L3B6 337 aa14.25□□□□□ -0.13
MRPL55-227ENST00000475832 TRIM22Q8IYM9 498 aa14.25□□□□□ -0.13
MRPL55-227ENST00000475832 SLC44A5Q8NCS7 719 aa14.25□□□□□ -0.13
MRPL55-227ENST00000475832 NSUN7Q8NE18 718 aaKnown RBP14.25□□□□□ -0.13
MRPL55-227ENST00000475832 SMARCC2Q8TAQ2 1214 aa14.25□□□□□ -0.13
MRPL55-227ENST00000475832 ANKS1AQ92625 1134 aa14.25□□□□□ -0.13
MRPL55-227ENST00000475832 ZBED3Q96IU2 234 aaPredicted RBP14.25□□□□□ -0.13
MRPL55-227ENST00000475832 CSRNP1Q96S65 589 aa14.25□□□□□ -0.13
MRPL55-227ENST00000475832 NCOA5Q9HCD5 579 aaKnown RBP14.25□□□□□ -0.13
MRPL55-227ENST00000475832 STX8Q9UNK0 236 aa14.25□□□□□ -0.13
MRPL55-227ENST00000475832 HPS5Q9UPZ3 1129 aa14.25□□□□□ -0.13
MRPL55-227ENST00000475832 BAZ2AQ9UIF9 1905 aaKnown RBP14.25□□□□□ -0.13
MRPL55-227ENST00000475832 NID2Q14112 1375 aa14.24□□□□□ -0.13
MRPL55-227ENST00000475832 PITPNM2Q9BZ72 1349 aa14.24□□□□□ -0.13
MRPL55-227ENST00000475832 MPHOSPH10O00566 681 aaKnown RBP14.24□□□□□ -0.13
MRPL55-227ENST00000475832 WNT10BO00744 389 aa14.24□□□□□ -0.13
MRPL55-227ENST00000475832 GNAQP50148 359 aa14.24□□□□□ -0.13
MRPL55-227ENST00000475832 AKAP17AQ02040 695 aaKnown RBP14.24□□□□□ -0.13
MRPL55-227ENST00000475832 EVX2Q03828 476 aa14.24□□□□□ -0.13
MRPL55-227ENST00000475832 ST3GAL1Q11201 340 aa14.24□□□□□ -0.13
MRPL55-227ENST00000475832 FANCBQ8NB91 859 aa14.24□□□□□ -0.13
MRPL55-227ENST00000475832 HOOK2Q96ED9 719 aa14.24□□□□□ -0.13
MRPL55-227ENST00000475832 DDX11Q96FC9 970 aa14.24□□□□□ -0.13
MRPL55-227ENST00000475832 VPS37CA5D8V6 355 aaPredicted RBP14.23□□□□□ -0.13
MRPL55-227ENST00000475832 DDTLA6NHG4 134 aaPredicted RBP14.23□□□□□ -0.13
MRPL55-227ENST00000475832 TRAF5O00463 557 aa14.23□□□□□ -0.13
MRPL55-227ENST00000475832 BRD1O95696 1058 aa14.23□□□□□ -0.13
MRPL55-227ENST00000475832 ZSCAN22P10073 491 aaPredicted RBP14.23□□□□□ -0.13
MRPL55-227ENST00000475832 TOP1P11387 765 aaKnown RBP14.23□□□□□ -0.13
MRPL55-227ENST00000475832 SYT1P21579 422 aa14.23□□□□□ -0.13
MRPL55-227ENST00000475832 SSRP1Q08945 709 aaKnown RBP14.23□□□□□ -0.13
MRPL55-227ENST00000475832 CERKLQ49MI3 558 aaPredicted RBP14.23□□□□□ -0.13
MRPL55-227ENST00000475832 CST9Q5W186 159 aa14.23□□□□□ -0.13
MRPL55-227ENST00000475832 RAB11FIP4Q86YS3 637 aa14.23□□□□□ -0.13
MRPL55-227ENST00000475832 ZFPM1Q8IX07 1006 aa14.23□□□□□ -0.13
MRPL55-227ENST00000475832 CCDC144CPQ8IYA2 1237 aa14.23□□□□□ -0.13
MRPL55-227ENST00000475832 NKX2-3Q8TAU0 364 aa14.23□□□□□ -0.13
MRPL55-227ENST00000475832 TNPO1Q92973 898 aaKnown RBP14.23□□□□□ -0.13
MRPL55-227ENST00000475832 MAP3K14Q99558 947 aa14.23□□□□□ -0.13
MRPL55-227ENST00000475832 GLIS2Q9BZE0 524 aaPredicted RBP14.23□□□□□ -0.13
MRPL55-227ENST00000475832 CABP5Q9NP86 173 aa14.23□□□□□ -0.13
MRPL55-227ENST00000475832 ORC3Q9UBD5 711 aaPredicted RBP14.23□□□□□ -0.13
MRPL55-227ENST00000475832 PLIN4Q96Q06 1357 aa14.22□□□□□ -0.13
MRPL55-227ENST00000475832 ASTN2O75129 1339 aaPredicted RBP14.22□□□□□ -0.13
MRPL55-227ENST00000475832 DDX60LQ5H9U9 1706 aaKnown RBP14.22□□□□□ -0.13
MRPL55-227ENST00000475832 JAK2O60674 1132 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms