RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 SRCIN1Q9C0H9 1055 aa17.41■□□□□ 0.38
ATG9A-220ENST00000475339 GNL3LQ9NVN8 582 aaKnown RBP17.41■□□□□ 0.38
ATG9A-220ENST00000475339 CACNA1FO60840 1977 aa17.4■□□□□ 0.38
ATG9A-220ENST00000475339 ATAD5Q96QE3 1844 aa17.4■□□□□ 0.38
ATG9A-220ENST00000475339 C19orf81C9J6K1 198 aa17.4■□□□□ 0.38
ATG9A-220ENST00000475339 CNMDO75829 334 aa17.4■□□□□ 0.38
ATG9A-220ENST00000475339 IGHA2P01877 340 aa17.4■□□□□ 0.38
ATG9A-220ENST00000475339 JAG1P78504 1218 aa17.4■□□□□ 0.38
ATG9A-220ENST00000475339 LRRC41Q15345 812 aa17.4■□□□□ 0.38
ATG9A-220ENST00000475339 MRPL50Q8N5N7 158 aaKnown RBP17.4■□□□□ 0.38
ATG9A-220ENST00000475339 FAM163AQ96GL9 167 aaPredicted RBP17.4■□□□□ 0.38
ATG9A-220ENST00000475339 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.4■□□□□ 0.382e-13■□□□□ 9.8
ATG9A-220ENST00000475339 TSPYL2Q9H2G4 693 aaPredicted RBP17.4■□□□□ 0.38
ATG9A-220ENST00000475339 C11orf16Q9NQ32 467 aa17.4■□□□□ 0.38
ATG9A-220ENST00000475339 DENND2AQ9ULE3 1009 aa17.4■□□□□ 0.38
ATG9A-220ENST00000475339 PQBP1O60828 265 aaKnown RBP17.39■□□□□ 0.37
ATG9A-220ENST00000475339 PHKA1P46020 1223 aa17.39■□□□□ 0.37
ATG9A-220ENST00000475339 CCNA1P78396 465 aa17.39■□□□□ 0.37
ATG9A-220ENST00000475339 GRB14Q14449 540 aa17.39■□□□□ 0.37
ATG9A-220ENST00000475339 TMEM39AQ9NV64 488 aa17.39■□□□□ 0.37
ATG9A-220ENST00000475339 ABCF2Q9UG63 623 aa17.39■□□□□ 0.37
ATG9A-220ENST00000475339 RABGAP1Q9Y3P9 1069 aa17.39■□□□□ 0.37
ATG9A-220ENST00000475339 PTPRCP08575 1304 aa17.39■□□□□ 0.37
ATG9A-220ENST00000475339 CHD9Q3L8U1 2897 aa17.38■□□□□ 0.37
ATG9A-220ENST00000475339 PLXNA1Q9UIW2 1896 aa17.38■□□□□ 0.37
ATG9A-220ENST00000475339 FAM86C2PA6NEL3 165 aa17.38■□□□□ 0.37
ATG9A-220ENST00000475339 USP17L10C9JJH3 530 aa17.38■□□□□ 0.37
ATG9A-220ENST00000475339 SEPT4O43236 478 aa17.38■□□□□ 0.37
ATG9A-220ENST00000475339 NPM3O75607 178 aaKnown RBP17.38■□□□□ 0.37
ATG9A-220ENST00000475339 SHROOM1Q2M3G4 852 aaPredicted RBP17.38■□□□□ 0.37
ATG9A-220ENST00000475339 SLF2Q8IX21 1173 aa17.38■□□□□ 0.37
ATG9A-220ENST00000475339 ZGPATQ8N5A5 531 aaKnown RBP17.38■□□□□ 0.37
ATG9A-220ENST00000475339 EMILIN3Q9NT22 766 aa17.38■□□□□ 0.37
ATG9A-220ENST00000475339 IVNS1ABPQ9Y6Y0 642 aa17.38■□□□□ 0.37
ATG9A-220ENST00000475339 MROH7-TTC4A0A0A0MT08 1334 aa17.38■□□□□ 0.37
ATG9A-220ENST00000475339 GPR75-ASB3A0A0A6YYF3 556 aa17.37■□□□□ 0.37
ATG9A-220ENST00000475339 EYA2O00167 538 aa17.37■□□□□ 0.37
ATG9A-220ENST00000475339 ASNSP08243 561 aa17.37■□□□□ 0.37
ATG9A-220ENST00000475339 MRE11P49959 708 aa17.37■□□□□ 0.37
ATG9A-220ENST00000475339 MICALL1Q8N3F8 863 aa17.37■□□□□ 0.37
ATG9A-220ENST00000475339 SEMA3EO15041 775 aa17.36■□□□□ 0.37
ATG9A-220ENST00000475339 GPR37L1O60883 481 aa17.36■□□□□ 0.37
ATG9A-220ENST00000475339 AAK1Q2M2I8 961 aa17.36■□□□□ 0.37
ATG9A-220ENST00000475339 FAM47AQ5JRC9 791 aa17.36■□□□□ 0.37
ATG9A-220ENST00000475339 PRAMEF19Q5SWL8 479 aa17.36■□□□□ 0.37
ATG9A-220ENST00000475339 C16orf59Q7L2K0 433 aa17.36■□□□□ 0.37
ATG9A-220ENST00000475339 KHSRPQ92945 711 aaKnown RBP eCLIP17.36■□□□□ 0.37
ATG9A-220ENST00000475339 HERC5Q9UII4 1024 aaKnown RBP17.36■□□□□ 0.37
ATG9A-220ENST00000475339 PHF24Q9UPV7 400 aa17.36■□□□□ 0.37
ATG9A-220ENST00000475339 ATP2B3Q16720 1220 aa17.35■□□□□ 0.37
ATG9A-220ENST00000475339 DPP9Q86TI2 863 aa17.35■□□□□ 0.37
ATG9A-220ENST00000475339 SLC44A5Q8NCS7 719 aa17.35■□□□□ 0.37
ATG9A-220ENST00000475339 REV3LO60673 3130 aa17.34■□□□□ 0.37
ATG9A-220ENST00000475339 RARSP54136 660 aaKnown RBP17.34■□□□□ 0.37
ATG9A-220ENST00000475339 MECOMQ03112 1051 aa17.34■□□□□ 0.37
ATG9A-220ENST00000475339 FAAP100Q0VG06 881 aa17.34■□□□□ 0.37
ATG9A-220ENST00000475339 SKIV2LQ15477 1246 aaKnown RBP17.34■□□□□ 0.37
ATG9A-220ENST00000475339 TMEM240Q5SV17 173 aa17.34■□□□□ 0.37
ATG9A-220ENST00000475339 RASIP1Q5U651 963 aa17.34■□□□□ 0.37
ATG9A-220ENST00000475339 OLFML2BQ68BL8 750 aa17.34■□□□□ 0.37
ATG9A-220ENST00000475339 ATG9AQ7Z3C6 839 aa17.34■□□□□ 0.37
ATG9A-220ENST00000475339 ZNF384Q8TF68 577 aa17.34■□□□□ 0.37
ATG9A-220ENST00000475339 NKX2-4Q9H2Z4 354 aa17.34■□□□□ 0.37
ATG9A-220ENST00000475339 BTBD7Q9P203 1132 aa17.34■□□□□ 0.37
ATG9A-220ENST00000475339 MSRAQ9UJ68 235 aa17.34■□□□□ 0.37
ATG9A-220ENST00000475339 CHD7Q9P2D1 2997 aa17.34■□□□□ 0.37
ATG9A-220ENST00000475339 GDF11O95390 407 aa17.33■□□□□ 0.36
ATG9A-220ENST00000475339 RASGRF1Q13972 1273 aa17.33■□□□□ 0.36
ATG9A-220ENST00000475339 USP17L2Q6R6M4 530 aa17.33■□□□□ 0.36
ATG9A-220ENST00000475339 PI4KBQ9UBF8 816 aa17.33■□□□□ 0.36
ATG9A-220ENST00000475339 USP17L15C9J2P7 530 aa17.32■□□□□ 0.36
ATG9A-220ENST00000475339 USP17L13C9JLJ4 530 aa17.32■□□□□ 0.36
ATG9A-220ENST00000475339 USP17L11C9JVI0 530 aa17.32■□□□□ 0.36
ATG9A-220ENST00000475339 USP17L18D6R9N7 530 aa17.32■□□□□ 0.36
ATG9A-220ENST00000475339 USP17L22D6RA61 530 aa17.32■□□□□ 0.36
ATG9A-220ENST00000475339 USP17L17D6RBQ6 530 aa17.32■□□□□ 0.36
ATG9A-220ENST00000475339 USP17L19D6RCP7 530 aa17.32■□□□□ 0.36
ATG9A-220ENST00000475339 USP17L20D6RJB6 530 aa17.32■□□□□ 0.36
ATG9A-220ENST00000475339 ERC2O15083 957 aa17.32■□□□□ 0.36
ATG9A-220ENST00000475339 TIMP1P01033 207 aa17.32■□□□□ 0.36
ATG9A-220ENST00000475339 ADORA2AP29274 412 aa17.32■□□□□ 0.36
ATG9A-220ENST00000475339 ADORA1P30542 326 aa17.32■□□□□ 0.36
ATG9A-220ENST00000475339 RFX5P48382 616 aaPredicted RBP17.32■□□□□ 0.36
ATG9A-220ENST00000475339 USP17L24Q0WX57 530 aa17.32■□□□□ 0.36
ATG9A-220ENST00000475339 CCDC102BQ68D86 513 aa17.32■□□□□ 0.36
ATG9A-220ENST00000475339 API5Q9BZZ5 524 aaKnown RBP17.32■□□□□ 0.36
ATG9A-220ENST00000475339 DNAJC18Q9H819 358 aa17.32■□□□□ 0.36
ATG9A-220ENST00000475339 A0A1W2PQ45 241 aaPredicted RBP17.31■□□□□ 0.36
ATG9A-220ENST00000475339 A0A1W2PQY0 241 aa17.31■□□□□ 0.36
ATG9A-220ENST00000475339 ACRP10323 421 aa17.31■□□□□ 0.36
ATG9A-220ENST00000475339 RAB30Q15771 203 aa17.31■□□□□ 0.36
ATG9A-220ENST00000475339 ZYXQ15942 572 aaKnown RBP17.31■□□□□ 0.36
ATG9A-220ENST00000475339 SPTY2D1Q68D10 685 aaPredicted RBP17.31■□□□□ 0.36
ATG9A-220ENST00000475339 MFSD5Q6N075 450 aa17.31■□□□□ 0.36
ATG9A-220ENST00000475339 ANKRD33Q7Z3H0 272 aa17.31■□□□□ 0.36
ATG9A-220ENST00000475339 SLC28A3Q9HAS3 691 aa17.31■□□□□ 0.36
ATG9A-220ENST00000475339 XPNPEP3Q9NQH7 507 aa17.31■□□□□ 0.36
ATG9A-220ENST00000475339 ZBTB21Q9ULJ3 1066 aa17.31■□□□□ 0.36
ATG9A-220ENST00000475339 NOB1Q9ULX3 412 aaKnown RBP17.31■□□□□ 0.36
ATG9A-220ENST00000475339 YBX2Q9Y2T7 364 aaKnown RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms