RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 C12orf42Q96LP6 360 aa15.42■□□□□ 0.06
SKA3-206ENST00000475251 EMILIN3Q9NT22 766 aa15.42■□□□□ 0.06
SKA3-206ENST00000475251 PALD1Q9ULE6 856 aa15.42■□□□□ 0.06
SKA3-206ENST00000475251 PEX10O60683 326 aa15.41■□□□□ 0.06
SKA3-206ENST00000475251 JAG1P78504 1218 aa15.41■□□□□ 0.06
SKA3-206ENST00000475251 SENP6Q9GZR1 1112 aaPredicted RBP15.41■□□□□ 0.06
SKA3-206ENST00000475251 DDX20Q9UHI6 824 aaKnown RBP15.41■□□□□ 0.06
SKA3-206ENST00000475251 CDK5RAP2Q96SN8 1893 aa15.4■□□□□ 0.06
SKA3-206ENST00000475251 SLC15A5A6NIM6 579 aa15.4■□□□□ 0.06
SKA3-206ENST00000475251 GH2P01242 217 aa15.4■□□□□ 0.06
SKA3-206ENST00000475251 ATP2B2Q01814 1243 aa15.4■□□□□ 0.06
SKA3-206ENST00000475251 WDR78Q5VTH9 848 aa15.4■□□□□ 0.06
SKA3-206ENST00000475251 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.4■□□□□ 0.06
SKA3-206ENST00000475251 LPAR1Q92633 364 aa15.4■□□□□ 0.06
SKA3-206ENST00000475251 ZNF512BQ96KM6 892 aaPredicted RBP15.4■□□□□ 0.06
SKA3-206ENST00000475251 SNRKQ9NRH2 765 aa15.4■□□□□ 0.06
SKA3-206ENST00000475251 FRMPD3Q5JV73 1810 aa15.4■□□□□ 0.06
SKA3-206ENST00000475251 A0A0C4DFX4 3053 aa15.39■□□□□ 0.05
SKA3-206ENST00000475251 PNMA6EA0A0J9YXQ4 647 aa15.39■□□□□ 0.05
SKA3-206ENST00000475251 POTEB2H3BUK9 544 aa15.39■□□□□ 0.05
SKA3-206ENST00000475251 DNM1LO00429 736 aa15.39■□□□□ 0.05
SKA3-206ENST00000475251 CYP2E1P05181 493 aaPredicted RBP15.39■□□□□ 0.05
SKA3-206ENST00000475251 HOXC6P09630 235 aa15.39■□□□□ 0.05
SKA3-206ENST00000475251 PTPREP23469 700 aa15.39■□□□□ 0.05
SKA3-206ENST00000475251 OS9Q13438 667 aaPredicted RBP15.39■□□□□ 0.05
SKA3-206ENST00000475251 TNNI3KQ59H18 835 aa15.39■□□□□ 0.05
SKA3-206ENST00000475251 ZNF697Q5TEC3 545 aa15.39■□□□□ 0.05
SKA3-206ENST00000475251 TMED8Q6PL24 325 aaPredicted RBP15.39■□□□□ 0.05
SKA3-206ENST00000475251 LBX2Q6XYB7 198 aa15.39■□□□□ 0.05
SKA3-206ENST00000475251 ADGRA1Q86SQ6 560 aa15.39■□□□□ 0.05
SKA3-206ENST00000475251 EHD4Q9H223 541 aa15.39■□□□□ 0.05
SKA3-206ENST00000475251 SAP30BPQ9UHR5 308 aaKnown RBP15.39■□□□□ 0.05
SKA3-206ENST00000475251 SERPINB13Q9UIV8 391 aa15.39■□□□□ 0.05
SKA3-206ENST00000475251 FPGT-TNNI3KV9GXZ4 949 aa15.39■□□□□ 0.05
SKA3-206ENST00000475251 CNGA1P29973 690 aa15.38■□□□□ 0.05
SKA3-206ENST00000475251 USP5P45974 858 aa15.38■□□□□ 0.05
SKA3-206ENST00000475251 ZYXQ15942 572 aaKnown RBP15.38■□□□□ 0.05
SKA3-206ENST00000475251 TATDN1Q6P1N9 297 aa15.38■□□□□ 0.05
SKA3-206ENST00000475251 CATSPERGQ6ZRH7 1159 aa15.38■□□□□ 0.05
SKA3-206ENST00000475251 TTC6Q86TZ1 520 aa15.38■□□□□ 0.05
SKA3-206ENST00000475251 DBNDD2Q9BQY9 259 aa15.38■□□□□ 0.05
SKA3-206ENST00000475251 KIAA1683Q9H0B3 1180 aa15.38■□□□□ 0.05
SKA3-206ENST00000475251 CABP5Q9NP86 173 aa15.38■□□□□ 0.05
SKA3-206ENST00000475251 CNMDO75829 334 aa15.37■□□□□ 0.05
SKA3-206ENST00000475251 TRIM27P14373 513 aa15.37■□□□□ 0.05
SKA3-206ENST00000475251 CYP7A1P22680 504 aa15.37■□□□□ 0.05
SKA3-206ENST00000475251 GRB14Q14449 540 aa15.37■□□□□ 0.05
SKA3-206ENST00000475251 RAB3GAP1Q15042 981 aa15.37■□□□□ 0.05
SKA3-206ENST00000475251 ABCB5Q2M3G0 1257 aa15.37■□□□□ 0.05
SKA3-206ENST00000475251 SHROOM1Q2M3G4 852 aaPredicted RBP15.37■□□□□ 0.05
SKA3-206ENST00000475251 CERKLQ49MI3 558 aaPredicted RBP15.37■□□□□ 0.05
SKA3-206ENST00000475251 ARRDC4Q8NCT1 418 aa15.37■□□□□ 0.05
SKA3-206ENST00000475251 COL25A1Q9BXS0 654 aaPredicted RBP15.37■□□□□ 0.05
SKA3-206ENST00000475251 VCAM1P19320 739 aa15.36■□□□□ 0.05
SKA3-206ENST00000475251 ZAP70P43403 619 aa15.36■□□□□ 0.05
SKA3-206ENST00000475251 POTEEQ6S8J3 1075 aa15.36■□□□□ 0.05
SKA3-206ENST00000475251 GUCD1Q96NT3 240 aa15.36■□□□□ 0.05
SKA3-206ENST00000475251 SLC5A4Q9NY91 659 aa15.36■□□□□ 0.05
SKA3-206ENST00000475251 FLRT1Q9NZU1 646 aa15.36■□□□□ 0.05
SKA3-206ENST00000475251 MYH1P12882 1939 aa15.36■□□□□ 0.05
SKA3-206ENST00000475251 KBTBD13C9JR72 458 aa15.35■□□□□ 0.05
SKA3-206ENST00000475251 STRNO43815 780 aa15.35■□□□□ 0.05
SKA3-206ENST00000475251 IDH1O75874 414 aaKnown RBP15.35■□□□□ 0.05
SKA3-206ENST00000475251 ATN1P54259 1190 aaPredicted RBP15.35■□□□□ 0.05
SKA3-206ENST00000475251 RTP1P59025 263 aa15.35■□□□□ 0.05
SKA3-206ENST00000475251 DYNLL1P63167 89 aaKnown RBP15.35■□□□□ 0.05
SKA3-206ENST00000475251 DPP9Q86TI2 863 aa15.35■□□□□ 0.05
SKA3-206ENST00000475251 NDUFB9Q9Y6M9 179 aa15.35■□□□□ 0.05
SKA3-206ENST00000475251 SPDYE16A6NNV3 312 aaPredicted RBP15.34■□□□□ 0.05
SKA3-206ENST00000475251 SURF6O75683 361 aaKnown RBP15.34■□□□□ 0.05
SKA3-206ENST00000475251 MAP3K12Q12852 859 aa15.34■□□□□ 0.05
SKA3-206ENST00000475251 OLFML2BQ68BL8 750 aa15.34■□□□□ 0.05
SKA3-206ENST00000475251 MIGA1Q8NAN2 632 aa15.34■□□□□ 0.05
SKA3-206ENST00000475251 SSH3Q8TE77 659 aa15.34■□□□□ 0.05
SKA3-206ENST00000475251 FRAT1Q92837 279 aaPredicted RBP15.34■□□□□ 0.05
SKA3-206ENST00000475251 RPAP3Q9H6T3 665 aaPredicted RBP15.34■□□□□ 0.05
SKA3-206ENST00000475251 PIH1D3Q9NQM4 214 aaKnown RBP15.34■□□□□ 0.05
SKA3-206ENST00000475251 HOXC10Q9NYD6 342 aa15.34■□□□□ 0.05
SKA3-206ENST00000475251 ZNF236Q9UL36 1845 aa15.33■□□□□ 0.05
SKA3-206ENST00000475251 CYBAP13498 195 aa15.33■□□□□ 0.04
SKA3-206ENST00000475251 CYP2C19P33261 490 aa15.33■□□□□ 0.04
SKA3-206ENST00000475251 MKRN4PQ13434 485 aaPredicted RBP15.33■□□□□ 0.04
SKA3-206ENST00000475251 MAGEB6Q8N7X4 407 aa15.33■□□□□ 0.04
SKA3-206ENST00000475251 NPLOC4Q8TAT6 608 aa15.33■□□□□ 0.04
SKA3-206ENST00000475251 FAM161BQ96MY7 647 aa15.33■□□□□ 0.04
SKA3-206ENST00000475251 BTBD7Q9P203 1132 aa15.33■□□□□ 0.04
SKA3-206ENST00000475251 ATP11BQ9Y2G3 1177 aa15.33■□□□□ 0.04
SKA3-206ENST00000475251 CUL9Q8IWT3 2517 aa15.33■□□□□ 0.04
SKA3-206ENST00000475251 LTBP2Q14767 1821 aa15.32■□□□□ 0.04
SKA3-206ENST00000475251 MYO5AQ9Y4I1 1855 aaKnown RBP15.32■□□□□ 0.04
SKA3-206ENST00000475251 SEPT4O43236 478 aa15.32■□□□□ 0.04
SKA3-206ENST00000475251 ATP8B2P98198 1209 aa15.32■□□□□ 0.04
SKA3-206ENST00000475251 COG2Q14746 738 aa15.32■□□□□ 0.04
SKA3-206ENST00000475251 SLC39A5Q6ZMH5 540 aa15.32■□□□□ 0.04
SKA3-206ENST00000475251 MB21D1Q8N884 522 aa15.32■□□□□ 0.04
SKA3-206ENST00000475251 SHCBP1Q8NEM2 672 aa15.32■□□□□ 0.04
SKA3-206ENST00000475251 ACER1Q8TDN7 264 aa15.32■□□□□ 0.04
SKA3-206ENST00000475251 CLUAP1Q96AJ1 413 aa15.32■□□□□ 0.04
SKA3-206ENST00000475251 PRDM5Q9NQX1 630 aaPredicted RBP15.32■□□□□ 0.04
SKA3-206ENST00000475251 DBNLQ9UJU6 430 aaKnown RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms