RNA–Protein interactions for RNA: ENST00000474691.1

EPCAM-205, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5

Gene EPCAM, Length 714 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-205ENST00000474691 Q3C1V9 767 aa16.81■□□□□ 0.28
EPCAM-205ENST00000474691 CERKLQ49MI3 558 aaPredicted RBP16.81■□□□□ 0.28
EPCAM-205ENST00000474691 MAP3K21Q5TCX8 1036 aa16.81■□□□□ 0.28
EPCAM-205ENST00000474691 ADGRA1Q86SQ6 560 aa16.81■□□□□ 0.28
EPCAM-205ENST00000474691 MAGEB6Q8N7X4 407 aa16.81■□□□□ 0.28
EPCAM-205ENST00000474691 LBHD1Q9BQE6 289 aaPredicted RBP16.81■□□□□ 0.28
EPCAM-205ENST00000474691 PORCNQ9H237 461 aa16.81■□□□□ 0.28
EPCAM-205ENST00000474691 DNAJC18Q9H819 358 aa16.81■□□□□ 0.28
EPCAM-205ENST00000474691 PIH1D3Q9NQM4 214 aaKnown RBP16.81■□□□□ 0.28
EPCAM-205ENST00000474691 EMILIN3Q9NT22 766 aa16.81■□□□□ 0.28
EPCAM-205ENST00000474691 TNNQ9UQP3 1299 aa16.81■□□□□ 0.28
EPCAM-205ENST00000474691 MAP2K5Q13163 448 aa16.8■□□□□ 0.28
EPCAM-205ENST00000474691 GPR153Q6NV75 609 aa16.8■□□□□ 0.28
EPCAM-205ENST00000474691 METTL16Q86W50 562 aaKnown RBP16.8■□□□□ 0.28
EPCAM-205ENST00000474691 SSH3Q8TE77 659 aa16.8■□□□□ 0.28
EPCAM-205ENST00000474691 C1orf115Q9H7X2 142 aa16.8■□□□□ 0.28
EPCAM-205ENST00000474691 MPHOSPH10O00566 681 aaKnown RBP16.79■□□□□ 0.28
EPCAM-205ENST00000474691 MSCO60682 206 aa16.79■□□□□ 0.28
EPCAM-205ENST00000474691 CCND3P30281 292 aaPredicted RBP16.79■□□□□ 0.28
EPCAM-205ENST00000474691 JAG1P78504 1218 aa16.79■□□□□ 0.28
EPCAM-205ENST00000474691 CCL14Q16627 93 aa16.79■□□□□ 0.28
EPCAM-205ENST00000474691 MORN1Q5T089 497 aa16.79■□□□□ 0.28
EPCAM-205ENST00000474691 NDUFB9Q9Y6M9 179 aa16.79■□□□□ 0.28
EPCAM-205ENST00000474691 SHROOM1Q2M3G4 852 aaPredicted RBP16.78■□□□□ 0.28
EPCAM-205ENST00000474691 LRIT3Q3SXY7 679 aa16.78■□□□□ 0.28
EPCAM-205ENST00000474691 TMED8Q6PL24 325 aaPredicted RBP16.78■□□□□ 0.28
EPCAM-205ENST00000474691 ERC1Q8IUD2 1116 aa16.78■□□□□ 0.28
EPCAM-205ENST00000474691 SENP6Q9GZR1 1112 aaPredicted RBP16.78■□□□□ 0.28
EPCAM-205ENST00000474691 EHD4Q9H223 541 aa16.78■□□□□ 0.28
EPCAM-205ENST00000474691 DBNLQ9UJU6 430 aaKnown RBP16.78■□□□□ 0.28
EPCAM-205ENST00000474691 SLC15A5A6NIM6 579 aa16.77■□□□□ 0.28
EPCAM-205ENST00000474691 MDM2Q00987 491 aaPredicted RBP16.77■□□□□ 0.28
EPCAM-205ENST00000474691 TTF1Q15361 905 aaPredicted RBP16.77■□□□□ 0.28
EPCAM-205ENST00000474691 CATSPERGQ6ZRH7 1159 aa16.77■□□□□ 0.28
EPCAM-205ENST00000474691 DPP9Q86TI2 863 aa16.77■□□□□ 0.28
EPCAM-205ENST00000474691 AACSQ86V21 672 aa16.77■□□□□ 0.28
EPCAM-205ENST00000474691 C12orf42Q96LP6 360 aa16.77■□□□□ 0.28
EPCAM-205ENST00000474691 SLC5A4Q9NY91 659 aa16.77■□□□□ 0.28
EPCAM-205ENST00000474691 PFASO15067 1338 aa16.76■□□□□ 0.27
EPCAM-205ENST00000474691 MAGEB6P1A0A0J9YX57 407 aa16.76■□□□□ 0.27
EPCAM-205ENST00000474691 VCAM1P19320 739 aa16.76■□□□□ 0.27
EPCAM-205ENST00000474691 PTPREP23469 700 aa16.76■□□□□ 0.27
EPCAM-205ENST00000474691 MNX1P50219 401 aaPredicted RBP16.76■□□□□ 0.27
EPCAM-205ENST00000474691 HSP90AB4PQ58FF6 505 aa16.76■□□□□ 0.27
EPCAM-205ENST00000474691 TATDN1Q6P1N9 297 aa16.76■□□□□ 0.27
EPCAM-205ENST00000474691 USP6NLQ92738 828 aa16.76■□□□□ 0.27
EPCAM-205ENST00000474691 CRNKL1Q9BZJ0 848 aaKnown RBP16.76■□□□□ 0.27
EPCAM-205ENST00000474691 KIAA1683Q9H0B3 1180 aa16.76■□□□□ 0.27
EPCAM-205ENST00000474691 BCL11AQ9H165 835 aa16.76■□□□□ 0.27
EPCAM-205ENST00000474691 RPAP3Q9H6T3 665 aaPredicted RBP16.76■□□□□ 0.27
EPCAM-205ENST00000474691 TLR7Q9NYK1 1049 aaKnown RBP16.76■□□□□ 0.27
EPCAM-205ENST00000474691 NOP58Q9Y2X3 529 aaKnown RBP16.76■□□□□ 0.27
EPCAM-205ENST00000474691 MAST2Q6P0Q8 1798 aa16.76■□□□□ 0.27
EPCAM-205ENST00000474691 MYCNP04198 464 aaPredicted RBP16.75■□□□□ 0.27
EPCAM-205ENST00000474691 LRRC26Q2I0M4 334 aa16.75■□□□□ 0.27
EPCAM-205ENST00000474691 EAF2Q96CJ1 260 aaPredicted RBP16.75■□□□□ 0.27
EPCAM-205ENST00000474691 MCM9Q9NXL9 1143 aa16.75■□□□□ 0.27
EPCAM-205ENST00000474691 HOXC10Q9NYD6 342 aa16.75■□□□□ 0.27
EPCAM-205ENST00000474691 DDX20Q9UHI6 824 aaKnown RBP16.75■□□□□ 0.27
EPCAM-205ENST00000474691 DDX60LQ5H9U9 1706 aaKnown RBP16.75■□□□□ 0.27
EPCAM-205ENST00000474691 LHX8Q68G74 356 aa16.74■□□□□ 0.27
EPCAM-205ENST00000474691 Q7L0L9 218 aa16.74■□□□□ 0.27
EPCAM-205ENST00000474691 AMOTL1Q8IY63 956 aa16.74■□□□□ 0.27
EPCAM-205ENST00000474691 ARRDC4Q8NCT1 418 aa16.74■□□□□ 0.27
EPCAM-205ENST00000474691 TANGO6Q9C0B7 1094 aa16.74■□□□□ 0.27
EPCAM-205ENST00000474691 STXBP5LQ9Y2K9 1186 aa16.74■□□□□ 0.27
EPCAM-205ENST00000474691 KBTBD13C9JR72 458 aa16.73■□□□□ 0.27
EPCAM-205ENST00000474691 COL6A1P12109 1028 aa16.73■□□□□ 0.27
EPCAM-205ENST00000474691 ATN1P54259 1190 aaPredicted RBP16.73■□□□□ 0.27
EPCAM-205ENST00000474691 PLS1Q14651 629 aa16.73■□□□□ 0.27
EPCAM-205ENST00000474691 COG2Q14746 738 aa16.73■□□□□ 0.27
EPCAM-205ENST00000474691 SAMD1Q6SPF0 538 aaPredicted RBP16.73■□□□□ 0.27
EPCAM-205ENST00000474691 ACER1Q8TDN7 264 aa16.73■□□□□ 0.27
EPCAM-205ENST00000474691 LPAR1Q92633 364 aa16.73■□□□□ 0.27
EPCAM-205ENST00000474691 EXOC6BQ9Y2D4 811 aa16.73■□□□□ 0.27
EPCAM-205ENST00000474691 STRNO43815 780 aa16.72■□□□□ 0.27
EPCAM-205ENST00000474691 CNMDO75829 334 aa16.72■□□□□ 0.27
EPCAM-205ENST00000474691 CYP2C19P33261 490 aa16.72■□□□□ 0.27
EPCAM-205ENST00000474691 SLC9C2Q5TAH2 1124 aa16.72■□□□□ 0.27
EPCAM-205ENST00000474691 LBX2Q6XYB7 198 aa16.72■□□□□ 0.27
EPCAM-205ENST00000474691 CLASRPQ8N2M8 674 aaKnown RBP16.72■□□□□ 0.27
EPCAM-205ENST00000474691 DDRGK1Q96HY6 314 aa16.72■□□□□ 0.27
EPCAM-205ENST00000474691 ANTXR1Q9H6X2 564 aa16.72■□□□□ 0.27
EPCAM-205ENST00000474691 SH2D4AQ9H788 454 aa16.72■□□□□ 0.27
EPCAM-205ENST00000474691 SPDYE16A6NNV3 312 aaPredicted RBP16.71■□□□□ 0.27
EPCAM-205ENST00000474691 DNM1LO00429 736 aa16.71■□□□□ 0.27
EPCAM-205ENST00000474691 IFIT2P09913 472 aaKnown RBP16.71■□□□□ 0.27
EPCAM-205ENST00000474691 PLCD1P51178 756 aa16.71■□□□□ 0.27
EPCAM-205ENST00000474691 GRB14Q14449 540 aa16.71■□□□□ 0.27
EPCAM-205ENST00000474691 SEPT2Q15019 361 aa16.71■□□□□ 0.27
EPCAM-205ENST00000474691 DNAJC2Q99543 621 aaKnown RBP16.71■□□□□ 0.27
EPCAM-205ENST00000474691 ARHGEF10LQ9HCE6 1279 aa16.71■□□□□ 0.27
EPCAM-205ENST00000474691 FLRT1Q9NZU1 646 aa16.71■□□□□ 0.27
EPCAM-205ENST00000474691 BTBD7Q9P203 1132 aa16.71■□□□□ 0.27
EPCAM-205ENST00000474691 ATP11BQ9Y2G3 1177 aa16.71■□□□□ 0.27
EPCAM-205ENST00000474691 ALPK3Q96L96 1907 aa16.7■□□□□ 0.26
EPCAM-205ENST00000474691 APBB1O00213 710 aa16.7■□□□□ 0.26
EPCAM-205ENST00000474691 HOXC6P09630 235 aa16.7■□□□□ 0.26
EPCAM-205ENST00000474691 SHMT1P34896 483 aa16.7■□□□□ 0.26
EPCAM-205ENST00000474691 HNRNPUQ00839 825 aaKnown RBP eCLIP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms