RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 ANKS1AQ92625 1134 aa12.09□□□□□ -0.47
COL12A1-206ENST00000474564 CDCA5Q96FF9 252 aa12.09□□□□□ -0.47
COL12A1-206ENST00000474564 WRNIP1Q96S55 665 aa12.09□□□□□ -0.47
COL12A1-206ENST00000474564 AGXT2Q9BYV1 514 aa12.09□□□□□ -0.47
COL12A1-206ENST00000474564 LY9Q9HBG7 655 aa12.09□□□□□ -0.47
COL12A1-206ENST00000474564 GOPCQ9HD26 462 aa12.09□□□□□ -0.47
COL12A1-206ENST00000474564 NMRK2Q9NPI5 230 aa12.09□□□□□ -0.47
COL12A1-206ENST00000474564 RBM28Q9NW13 759 aaKnown RBP12.09□□□□□ -0.47
COL12A1-206ENST00000474564 MTMR4Q9NYA4 1195 aa12.09□□□□□ -0.47
COL12A1-206ENST00000474564 NYAP2Q9P242 653 aa12.09□□□□□ -0.47
COL12A1-206ENST00000474564 CLIP2Q9UDT6 1046 aa12.09□□□□□ -0.47
COL12A1-206ENST00000474564 SYNPO2Q9UMS6 1093 aa12.09□□□□□ -0.47
COL12A1-206ENST00000474564 LAMB1P07942 1786 aa12.09□□□□□ -0.47
COL12A1-206ENST00000474564 UNCXA6NJT0 531 aa12.08□□□□□ -0.48
COL12A1-206ENST00000474564 FAM196BA6NMK8 535 aa12.08□□□□□ -0.48
COL12A1-206ENST00000474564 USP17L5A8MUK1 530 aa12.08□□□□□ -0.48
COL12A1-206ENST00000474564 RAD21O60216 631 aa12.08□□□□□ -0.48
COL12A1-206ENST00000474564 GDF11O95390 407 aa12.08□□□□□ -0.48
COL12A1-206ENST00000474564 PDIA4P13667 645 aaKnown RBP12.08□□□□□ -0.48
COL12A1-206ENST00000474564 METAP2P50579 478 aaKnown RBP eCLIP12.08□□□□□ -0.48
COL12A1-206ENST00000474564 FKBP1BP68106 108 aa12.08□□□□□ -0.48
COL12A1-206ENST00000474564 AKAP17AQ02040 695 aaKnown RBP12.08□□□□□ -0.48
COL12A1-206ENST00000474564 TOB2Q14106 344 aaPredicted RBP12.08□□□□□ -0.48
COL12A1-206ENST00000474564 MAP1SQ66K74 1059 aaPredicted RBP12.08□□□□□ -0.48
COL12A1-206ENST00000474564 ZNF654Q8IZM8 581 aa12.08□□□□□ -0.48
COL12A1-206ENST00000474564 SPRYD3Q8NCJ5 442 aa12.08□□□□□ -0.48
COL12A1-206ENST00000474564 PNMA1Q8ND90 353 aa12.08□□□□□ -0.48
COL12A1-206ENST00000474564 NUP133Q8WUM0 1156 aa12.08□□□□□ -0.48
COL12A1-206ENST00000474564 CEP95Q96GE4 821 aa12.08□□□□□ -0.48
COL12A1-206ENST00000474564 TMX3Q96JJ7 454 aa12.08□□□□□ -0.48
COL12A1-206ENST00000474564 FEZ1Q99689 392 aa12.08□□□□□ -0.48
COL12A1-206ENST00000474564 LZTS2Q9BRK4 669 aa12.08□□□□□ -0.48
COL12A1-206ENST00000474564 GLIS2Q9BZE0 524 aaPredicted RBP12.08□□□□□ -0.48
COL12A1-206ENST00000474564 ISY1Q9ULR0 285 aaKnown RBP12.08□□□□□ -0.48
COL12A1-206ENST00000474564 SCAF8Q9UPN6 1271 aaKnown RBP12.08□□□□□ -0.48
COL12A1-206ENST00000474564 PLIN4Q96Q06 1357 aa12.07□□□□□ -0.48
COL12A1-206ENST00000474564 GOLGA8AA7E2F4 631 aa12.07□□□□□ -0.48
COL12A1-206ENST00000474564 SMIM22K7EJ46 135 aa12.07□□□□□ -0.48
COL12A1-206ENST00000474564 EVCP57679 992 aa12.07□□□□□ -0.48
COL12A1-206ENST00000474564 EVX2Q03828 476 aa12.07□□□□□ -0.48
COL12A1-206ENST00000474564 STK3Q13188 491 aa12.07□□□□□ -0.48
COL12A1-206ENST00000474564 PRKG1Q13976 671 aa12.07□□□□□ -0.48
COL12A1-206ENST00000474564 SEPT2Q15019 361 aa12.07□□□□□ -0.48
COL12A1-206ENST00000474564 SEC23AQ15436 765 aa12.07□□□□□ -0.48
COL12A1-206ENST00000474564 PRAMEF18Q5VWM3 479 aa12.07□□□□□ -0.48
COL12A1-206ENST00000474564 APOA5Q6Q788 366 aa12.07□□□□□ -0.48
COL12A1-206ENST00000474564 TRIM22Q8IYM9 498 aa12.07□□□□□ -0.48
COL12A1-206ENST00000474564 ANKRD13AQ8IZ07 590 aa12.07□□□□□ -0.48
COL12A1-206ENST00000474564 SCYL3Q8IZE3 742 aa12.07□□□□□ -0.48
COL12A1-206ENST00000474564 INTS4Q96HW7 963 aaKnown RBP12.07□□□□□ -0.48
COL12A1-206ENST00000474564 MAP3K14Q99558 947 aa12.07□□□□□ -0.48
COL12A1-206ENST00000474564 LLPHQ9BRT6 129 aaKnown RBP12.07□□□□□ -0.48
COL12A1-206ENST00000474564 ZNF408Q9H9D4 720 aa12.07□□□□□ -0.48
COL12A1-206ENST00000474564 CWC22Q9HCG8 908 aaKnown RBP12.07□□□□□ -0.48
COL12A1-206ENST00000474564 ZBTB21Q9ULJ3 1066 aa12.07□□□□□ -0.48
COL12A1-206ENST00000474564 TPCN1Q9ULQ1 816 aa12.07□□□□□ -0.48
COL12A1-206ENST00000474564 SMC3Q9UQE7 1217 aa12.07□□□□□ -0.48
COL12A1-206ENST00000474564 CDK5RAP2Q96SN8 1893 aa12.06□□□□□ -0.48
COL12A1-206ENST00000474564 NMT2O60551 498 aa12.06□□□□□ -0.48
COL12A1-206ENST00000474564 PFKFB2O60825 505 aa12.06□□□□□ -0.48
COL12A1-206ENST00000474564 PARP1P09874 1014 aaKnown RBP12.06□□□□□ -0.48
COL12A1-206ENST00000474564 EEF2P13639 858 aaKnown RBP12.06□□□□□ -0.48
COL12A1-206ENST00000474564 YY1P25490 414 aa12.06□□□□□ -0.48
COL12A1-206ENST00000474564 PDIA3P30101 505 aaKnown RBP12.06□□□□□ -0.48
COL12A1-206ENST00000474564 USP14P54578 494 aa12.06□□□□□ -0.48
COL12A1-206ENST00000474564 RTN1Q16799 776 aa12.06□□□□□ -0.48
COL12A1-206ENST00000474564 MICU3Q86XE3 530 aa12.06□□□□□ -0.48
COL12A1-206ENST00000474564 FAM184AQ8NB25 1140 aa12.06□□□□□ -0.48
COL12A1-206ENST00000474564 FANCBQ8NB91 859 aa12.06□□□□□ -0.48
COL12A1-206ENST00000474564 SMC1BQ8NDV3 1235 aa12.06□□□□□ -0.48
COL12A1-206ENST00000474564 MKL1Q969V6 931 aa12.06□□□□□ -0.48
COL12A1-206ENST00000474564 KLRG1Q96E93 195 aa12.06□□□□□ -0.48
COL12A1-206ENST00000474564 TMEM47Q9BQJ4 181 aa12.06□□□□□ -0.48
COL12A1-206ENST00000474564 LARP6Q9BRS8 491 aaKnown RBP12.06□□□□□ -0.48
COL12A1-206ENST00000474564 DNAJC18Q9H819 358 aa12.06□□□□□ -0.48
COL12A1-206ENST00000474564 IL17RBQ9NRM6 502 aa12.06□□□□□ -0.48
COL12A1-206ENST00000474564 RBM27Q9P2N5 1060 aaKnown RBP12.06□□□□□ -0.48
COL12A1-206ENST00000474564 ZNF112Q9UJU3 913 aa12.06□□□□□ -0.48
COL12A1-206ENST00000474564 TACC3Q9Y6A5 838 aa12.06□□□□□ -0.48
COL12A1-206ENST00000474564 PHF20L1A8MW92 1017 aa12.05□□□□□ -0.48
COL12A1-206ENST00000474564 USP2O75604 605 aaPredicted RBP12.05□□□□□ -0.48
COL12A1-206ENST00000474564 PDCP20941 246 aa12.05□□□□□ -0.48
COL12A1-206ENST00000474564 CCT2P78371 535 aaKnown RBP12.05□□□□□ -0.48
COL12A1-206ENST00000474564 HMGN5P82970 282 aaKnown RBP12.05□□□□□ -0.48
COL12A1-206ENST00000474564 ME3Q16798 604 aa12.05□□□□□ -0.48
COL12A1-206ENST00000474564 ASPRV1Q53RT3 343 aa12.05□□□□□ -0.48
COL12A1-206ENST00000474564 NOL9Q5SY16 702 aaKnown RBP12.05□□□□□ -0.48
COL12A1-206ENST00000474564 GPATCH4Q5T3I0 446 aaKnown RBP12.05□□□□□ -0.48
COL12A1-206ENST00000474564 RCSD1Q6JBY9 416 aa12.05□□□□□ -0.48
COL12A1-206ENST00000474564 CCDC83Q8IWF9 413 aa12.05□□□□□ -0.48
COL12A1-206ENST00000474564 RBM46Q8TBY0 533 aaKnown RBP12.05□□□□□ -0.48
COL12A1-206ENST00000474564 WASF1Q92558 559 aa12.05□□□□□ -0.48
COL12A1-206ENST00000474564 SLC10A4Q96EP9 437 aa12.05□□□□□ -0.48
COL12A1-206ENST00000474564 DDX60LQ5H9U9 1706 aaKnown RBP12.05□□□□□ -0.48
COL12A1-206ENST00000474564 IGKV6D-41A0A0C4DH26 115 aa12.04□□□□□ -0.48
COL12A1-206ENST00000474564 C19orf81C9J6K1 198 aa12.04□□□□□ -0.48
COL12A1-206ENST00000474564 XBP1P17861 261 aa12.04□□□□□ -0.48
COL12A1-206ENST00000474564 SLC1A4P43007 532 aa12.04□□□□□ -0.48
COL12A1-206ENST00000474564 SSRP1Q08945 709 aaKnown RBP12.04□□□□□ -0.48
COL12A1-206ENST00000474564 TRAF1Q13077 416 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms