RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, humanhuman

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-208ENST00000474272 ZSCAN22P10073 491 aaPredicted RBP6.65□□□□□ -1.34
TMEM50B-208ENST00000474272 KIR3DL1P43629 444 aa6.65□□□□□ -1.34
TMEM50B-208ENST00000474272 LIG3P49916 1009 aa6.65□□□□□ -1.34
TMEM50B-208ENST00000474272 MRPL41Q8IXM3 137 aaKnown RBP6.65□□□□□ -1.34
TMEM50B-208ENST00000474272 MYLIPQ8WY64 445 aa6.65□□□□□ -1.34
TMEM50B-208ENST00000474272 ACSF2Q96CM8 615 aaPredicted RBP6.65□□□□□ -1.34
TMEM50B-208ENST00000474272 DUSP15Q9H1R2 295 aaPredicted RBP6.65□□□□□ -1.34
TMEM50B-208ENST00000474272 C19orf44Q9H6X5 657 aa6.65□□□□□ -1.34
TMEM50B-208ENST00000474272 AK5Q9Y6K8 562 aa6.65□□□□□ -1.34
TMEM50B-208ENST00000474272 LRRN2O75325 713 aa6.64□□□□□ -1.35
TMEM50B-208ENST00000474272 TPP2P29144 1249 aaPredicted RBP6.64□□□□□ -1.35
TMEM50B-208ENST00000474272 RPS26P62854 115 aaKnown RBP6.64□□□□□ -1.35
TMEM50B-208ENST00000474272 DNAJB8Q8NHS0 232 aa6.64□□□□□ -1.35
TMEM50B-208ENST00000474272 ZSCAN18Q8TBC5 510 aaPredicted RBP6.64□□□□□ -1.35
TMEM50B-208ENST00000474272 MIR1-1HGQ9H1L0 117 aa6.64□□□□□ -1.35
TMEM50B-208ENST00000474272 TMEM59LQ9UK28 342 aa6.64□□□□□ -1.35
TMEM50B-208ENST00000474272 PRPF40AO75400 957 aaKnown RBP6.63□□□□□ -1.35
TMEM50B-208ENST00000474272 TMEM253P0C7T8 217 aa6.63□□□□□ -1.35
TMEM50B-208ENST00000474272 RAC2P15153 192 aa6.63□□□□□ -1.35
TMEM50B-208ENST00000474272 KRTAP19-4Q3LI73 84 aa6.63□□□□□ -1.35
TMEM50B-208ENST00000474272 SLC6A19Q695T7 634 aa6.63□□□□□ -1.35
TMEM50B-208ENST00000474272 ATG14Q6ZNE5 492 aa6.63□□□□□ -1.35
TMEM50B-208ENST00000474272 MCATQ8IVS2 390 aaKnown RBP6.63□□□□□ -1.35
TMEM50B-208ENST00000474272 FRMD6Q96NE9 622 aa6.63□□□□□ -1.35
TMEM50B-208ENST00000474272 EPB41L4BQ9H329 900 aa6.63□□□□□ -1.35
TMEM50B-208ENST00000474272 ETV2O00321 342 aaPredicted RBP6.62□□□□□ -1.35
TMEM50B-208ENST00000474272 TMPRSS7Q7RTY8 843 aa6.62□□□□□ -1.35
TMEM50B-208ENST00000474272 PPP1R13LQ8WUF5 828 aa6.62□□□□□ -1.35
TMEM50B-208ENST00000474272 CCDC120Q96HB5 630 aa6.62□□□□□ -1.35
TMEM50B-208ENST00000474272 RNF32Q9H0A6 362 aa6.62□□□□□ -1.35
TMEM50B-208ENST00000474272 CEP131Q9UPN4 1083 aa6.62□□□□□ -1.35
TMEM50B-208ENST00000474272 HPXP02790 462 aa6.61□□□□□ -1.35
TMEM50B-208ENST00000474272 ETV3P41162 512 aa6.61□□□□□ -1.35
TMEM50B-208ENST00000474272 KCNA1Q09470 495 aa6.61□□□□□ -1.35
TMEM50B-208ENST00000474272 TSNAXIP1Q2TAA8 658 aa6.61□□□□□ -1.35
TMEM50B-208ENST00000474272 GAB4Q2WGN9 574 aa6.61□□□□□ -1.35
TMEM50B-208ENST00000474272 PIWIL2Q8TC59 973 aaKnown RBP6.61□□□□□ -1.35
TMEM50B-208ENST00000474272 KCNN1Q92952 543 aa6.61□□□□□ -1.35
TMEM50B-208ENST00000474272 KRTAP4-2Q9BYR5 136 aa6.61□□□□□ -1.35
TMEM50B-208ENST00000474272 SP110Q9HB58 689 aa6.61□□□□□ -1.35
TMEM50B-208ENST00000474272 TACC3Q9Y6A5 838 aa6.61□□□□□ -1.35
TMEM50B-208ENST00000474272 PLCG1P19174 1290 aa6.6□□□□□ -1.35
TMEM50B-208ENST00000474272 RPL6Q02878 288 aaKnown RBP6.6□□□□□ -1.35
TMEM50B-208ENST00000474272 EGR3Q06889 387 aa6.6□□□□□ -1.35
TMEM50B-208ENST00000474272 PDE4BQ07343 736 aa6.6□□□□□ -1.35
TMEM50B-208ENST00000474272 KCNA10Q16322 511 aa6.6□□□□□ -1.35
TMEM50B-208ENST00000474272 TIGD5Q53EQ6 642 aa6.6□□□□□ -1.35
TMEM50B-208ENST00000474272 BNC2Q6ZN30 1099 aaPredicted RBP6.6□□□□□ -1.35
TMEM50B-208ENST00000474272 COX4I2Q96KJ9 171 aa6.6□□□□□ -1.35
TMEM50B-208ENST00000474272 DUSP13Q9UII6 198 aa6.6□□□□□ -1.35
TMEM50B-208ENST00000474272 SMG5Q9UPR3 1016 aaKnown RBP6.6□□□□□ -1.35
TMEM50B-208ENST00000474272 ANKRD33BA6NCL7 494 aa6.59□□□□□ -1.35
TMEM50B-208ENST00000474272 LILRA6Q6PI73 481 aa6.59□□□□□ -1.35
TMEM50B-208ENST00000474272 DTWD2Q8NBA8 298 aa6.59□□□□□ -1.35
TMEM50B-208ENST00000474272 FAM13CQ8NE31 585 aa6.59□□□□□ -1.35
TMEM50B-208ENST00000474272 FAM161BQ96MY7 647 aa6.59□□□□□ -1.35
TMEM50B-208ENST00000474272 CD320Q9NPF0 282 aa6.59□□□□□ -1.35
TMEM50B-208ENST00000474272 PCDHA11Q9Y5I1 949 aa6.59□□□□□ -1.35
TMEM50B-208ENST00000474272 TCAF2A6NFQ2 919 aa6.58□□□□□ -1.36
TMEM50B-208ENST00000474272 ZGLP1P0C6A0 271 aa6.58□□□□□ -1.36
TMEM50B-208ENST00000474272 SRFP11831 508 aa6.58□□□□□ -1.36
TMEM50B-208ENST00000474272 GALK1P51570 392 aa6.58□□□□□ -1.36
TMEM50B-208ENST00000474272 EAPPQ56P03 285 aaPredicted RBP6.58□□□□□ -1.36
TMEM50B-208ENST00000474272 TSPYL5Q86VY4 417 aaPredicted RBP6.58□□□□□ -1.36
TMEM50B-208ENST00000474272 SIAH1Q8IUQ4 282 aa6.58□□□□□ -1.36
TMEM50B-208ENST00000474272 PHC3Q8NDX5 983 aa6.58□□□□□ -1.36
TMEM50B-208ENST00000474272 TRIT1Q9H3H1 467 aaKnown RBP6.58□□□□□ -1.36
TMEM50B-208ENST00000474272 GPATCH2Q9NW75 528 aa6.58□□□□□ -1.36
TMEM50B-208ENST00000474272 PARP2Q9UGN5 583 aa6.58□□□□□ -1.36
TMEM50B-208ENST00000474272 ADAM30Q9UKF2 790 aa6.58□□□□□ -1.36
TMEM50B-208ENST00000474272 LTKP29376 864 aa6.57□□□□□ -1.36
TMEM50B-208ENST00000474272 CYB5D2Q8WUJ1 264 aa6.57□□□□□ -1.36
TMEM50B-208ENST00000474272 GPR62Q9BZJ7 368 aa6.57□□□□□ -1.36
TMEM50B-208ENST00000474272 IRF2BPLQ9H1B7 796 aa6.57□□□□□ -1.36
TMEM50B-208ENST00000474272 EBF1Q9UH73 591 aa6.57□□□□□ -1.36
TMEM50B-208ENST00000474272 CHURC1-FNTBB4DL54 471 aa6.56□□□□□ -1.36
TMEM50B-208ENST00000474272 CTSHP09668 335 aa6.56□□□□□ -1.36
TMEM50B-208ENST00000474272 PDIA4P13667 645 aaKnown RBP6.56□□□□□ -1.36
TMEM50B-208ENST00000474272 TAF1CQ15572 869 aaPredicted RBP6.56□□□□□ -1.36
TMEM50B-208ENST00000474272 CIAPIN1Q6FI81 312 aa6.56□□□□□ -1.36
TMEM50B-208ENST00000474272 ZNF605Q86T29 641 aa6.56□□□□□ -1.36
TMEM50B-208ENST00000474272 BAHD1Q8TBE0 780 aaPredicted RBP6.56□□□□□ -1.36
TMEM50B-208ENST00000474272 TRAIPQ9BWF2 469 aa6.56□□□□□ -1.36
TMEM50B-208ENST00000474272 SHISA3A0PJX4 238 aa6.55□□□□□ -1.36
TMEM50B-208ENST00000474272 NUAK1O60285 661 aa6.55□□□□□ -1.36
TMEM50B-208ENST00000474272 GRIN3BO60391 1043 aa6.55□□□□□ -1.36
TMEM50B-208ENST00000474272 F13A1P00488 732 aa6.55□□□□□ -1.36
TMEM50B-208ENST00000474272 PF4P02776 101 aa6.55□□□□□ -1.36
TMEM50B-208ENST00000474272 INHBBP09529 407 aa6.55□□□□□ -1.36
TMEM50B-208ENST00000474272 MED14OSP0DP75 135 aa6.55□□□□□ -1.36
TMEM50B-208ENST00000474272 GLDCP23378 1020 aa6.55□□□□□ -1.36
TMEM50B-208ENST00000474272 TNNI2P48788 182 aa6.55□□□□□ -1.36
TMEM50B-208ENST00000474272 PSMD2Q13200 908 aa6.55□□□□□ -1.36
TMEM50B-208ENST00000474272 TTLL10Q6ZVT0 673 aa6.55□□□□□ -1.36
TMEM50B-208ENST00000474272 PDZD8Q8NEN9 1154 aa6.55□□□□□ -1.36
TMEM50B-208ENST00000474272 KLHL3Q9UH77 587 aa6.55□□□□□ -1.36
TMEM50B-208ENST00000474272 KCNH3Q9ULD8 1083 aa6.55□□□□□ -1.36
TMEM50B-208ENST00000474272 MYOCOSA0A1B0GUC4 107 aa6.54□□□□□ -1.36
TMEM50B-208ENST00000474272 FAM221AA4D161 298 aa6.54□□□□□ -1.36
TMEM50B-208ENST00000474272 CILPO75339 1184 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms