RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 ZYXQ15942 572 aaKnown RBP13.42□□□□□ -0.26
CKS1B-206ENST00000474215 TMEM179Q6ZVK1 233 aa13.42□□□□□ -0.26
CKS1B-206ENST00000474215 SMC5Q8IY18 1101 aa13.42□□□□□ -0.26
CKS1B-206ENST00000474215 RAET1EQ8TD07 263 aa13.42□□□□□ -0.26
CKS1B-206ENST00000474215 SH3TC2Q8TF17 1288 aa13.42□□□□□ -0.26
CKS1B-206ENST00000474215 C12orf42Q96LP6 360 aa13.42□□□□□ -0.26
CKS1B-206ENST00000474215 CCDC17Q96LX7 622 aa13.42□□□□□ -0.26
CKS1B-206ENST00000474215 FSD1Q9BTV5 496 aa13.42□□□□□ -0.26
CKS1B-206ENST00000474215 DDX60LQ5H9U9 1706 aaKnown RBP13.42□□□□□ -0.26
CKS1B-206ENST00000474215 LOC285556D6RIA3 1793 aa13.41□□□□□ -0.26
CKS1B-206ENST00000474215 SMIM22K7EJ46 135 aa13.41□□□□□ -0.26
CKS1B-206ENST00000474215 TNPO2O14787 897 aaKnown RBP13.41□□□□□ -0.26
CKS1B-206ENST00000474215 GPAA1O43292 621 aa13.41□□□□□ -0.26
CKS1B-206ENST00000474215 IGHDP01880 384 aa13.41□□□□□ -0.26
CKS1B-206ENST00000474215 PDE1AP54750 535 aa13.41□□□□□ -0.26
CKS1B-206ENST00000474215 HERVK_113P62684 666 aa13.41□□□□□ -0.26
CKS1B-206ENST00000474215 PRKCZQ05513 592 aa13.41□□□□□ -0.26
CKS1B-206ENST00000474215 SBK1Q52WX2 424 aa13.41□□□□□ -0.26
CKS1B-206ENST00000474215 C16orf86Q6ZW13 317 aa13.41□□□□□ -0.26
CKS1B-206ENST00000474215 TMEM106CQ9BVX2 250 aa13.41□□□□□ -0.26
CKS1B-206ENST00000474215 ARPP21Q9UBL0 812 aaPredicted RBP13.41□□□□□ -0.26
CKS1B-206ENST00000474215 MORF4L1Q9UBU8 362 aa13.41□□□□□ -0.26
CKS1B-206ENST00000474215 NAV1Q8NEY1 1877 aa13.4□□□□□ -0.26
CKS1B-206ENST00000474215 TNRC18O15417 2968 aaPredicted RBP13.4□□□□□ -0.26
CKS1B-206ENST00000474215 A0A1W2PRG0 241 aa13.4□□□□□ -0.26
CKS1B-206ENST00000474215 POTEFA5A3E0 1075 aa13.4□□□□□ -0.26
CKS1B-206ENST00000474215 USP17L15C9J2P7 530 aa13.4□□□□□ -0.26
CKS1B-206ENST00000474215 PATL2C9JE40 543 aaKnown RBP13.4□□□□□ -0.26
CKS1B-206ENST00000474215 USP17L13C9JLJ4 530 aa13.4□□□□□ -0.26
CKS1B-206ENST00000474215 USP17L11C9JVI0 530 aa13.4□□□□□ -0.26
CKS1B-206ENST00000474215 USP17L18D6R9N7 530 aa13.4□□□□□ -0.26
CKS1B-206ENST00000474215 USP17L22D6RA61 530 aa13.4□□□□□ -0.26
CKS1B-206ENST00000474215 USP17L17D6RBQ6 530 aa13.4□□□□□ -0.26
CKS1B-206ENST00000474215 USP17L19D6RCP7 530 aa13.4□□□□□ -0.26
CKS1B-206ENST00000474215 USP17L20D6RJB6 530 aa13.4□□□□□ -0.26
CKS1B-206ENST00000474215 M0R2C6 588 aa13.4□□□□□ -0.26
CKS1B-206ENST00000474215 APPP05067 770 aa13.4□□□□□ -0.26
CKS1B-206ENST00000474215 AKR1B1P15121 316 aa13.4□□□□□ -0.26
CKS1B-206ENST00000474215 GRK4P32298 578 aa13.4□□□□□ -0.26
CKS1B-206ENST00000474215 USP17L24Q0WX57 530 aa13.4□□□□□ -0.26
CKS1B-206ENST00000474215 ZMYM1Q5SVZ6 1142 aa13.4□□□□□ -0.26
CKS1B-206ENST00000474215 B4GALNT3Q6L9W6 998 aa13.4□□□□□ -0.26
CKS1B-206ENST00000474215 GPRC5AQ8NFJ5 357 aa13.4□□□□□ -0.26
CKS1B-206ENST00000474215 COA7Q96BR5 231 aa13.4□□□□□ -0.26
CKS1B-206ENST00000474215 EVI5LQ96CN4 794 aa13.4□□□□□ -0.26
CKS1B-206ENST00000474215 LNPKQ9C0E8 428 aa13.4□□□□□ -0.26
CKS1B-206ENST00000474215 RBPJLQ9UBG7 517 aa13.4□□□□□ -0.26
CKS1B-206ENST00000474215 GABRQQ9UN88 632 aa13.4□□□□□ -0.26
CKS1B-206ENST00000474215 ZSWIM8A7E2V4 1837 aa13.4□□□□□ -0.26
CKS1B-206ENST00000474215 CENPFP49454 3210 aa13.39□□□□□ -0.27
CKS1B-206ENST00000474215 MINDY4BA8MYZ0 360 aa13.39□□□□□ -0.27
CKS1B-206ENST00000474215 VCAM1P19320 739 aa13.39□□□□□ -0.27
CKS1B-206ENST00000474215 FLT3LGP49771 235 aa13.39□□□□□ -0.27
CKS1B-206ENST00000474215 CATSPERGQ6ZRH7 1159 aa13.39□□□□□ -0.27
CKS1B-206ENST00000474215 SIAH1Q8IUQ4 282 aa13.39□□□□□ -0.27
CKS1B-206ENST00000474215 GTF3C2Q8WUA4 911 aaPredicted RBP13.39□□□□□ -0.27
CKS1B-206ENST00000474215 SEC62Q99442 399 aaKnown RBP13.39□□□□□ -0.27
CKS1B-206ENST00000474215 MYH7P12883 1935 aa13.39□□□□□ -0.27
CKS1B-206ENST00000474215 ADCY3O60266 1144 aa13.38□□□□□ -0.27
CKS1B-206ENST00000474215 MYCP01106 439 aaPredicted RBP13.38□□□□□ -0.27
CKS1B-206ENST00000474215 TDO2P48775 406 aa13.38□□□□□ -0.27
CKS1B-206ENST00000474215 NUCB1Q02818 461 aa13.38□□□□□ -0.27
CKS1B-206ENST00000474215 IRF5Q13568 498 aa13.38□□□□□ -0.27
CKS1B-206ENST00000474215 POTEEQ6S8J3 1075 aa13.38□□□□□ -0.27
CKS1B-206ENST00000474215 CHD1LQ86WJ1 897 aa13.38□□□□□ -0.27
CKS1B-206ENST00000474215 IFNL3Q8IZI9 196 aa13.38□□□□□ -0.27
CKS1B-206ENST00000474215 NACAP1Q9BZK3 213 aa13.38□□□□□ -0.27
CKS1B-206ENST00000474215 KANSL2Q9H9L4 492 aa13.38□□□□□ -0.27
CKS1B-206ENST00000474215 ARHGEF10LQ9HCE6 1279 aa13.38□□□□□ -0.27
CKS1B-206ENST00000474215 TXNRD2Q9NNW7 524 aa13.38□□□□□ -0.27
CKS1B-206ENST00000474215 BIN2Q9UBW5 565 aaPredicted RBP13.38□□□□□ -0.27
CKS1B-206ENST00000474215 PEX10O60683 326 aa13.37□□□□□ -0.27
CKS1B-206ENST00000474215 EN2P19622 333 aaPredicted RBP13.37□□□□□ -0.27
CKS1B-206ENST00000474215 ICA1Q05084 483 aa13.37□□□□□ -0.27
CKS1B-206ENST00000474215 Q3C1V9 767 aa13.37□□□□□ -0.27
CKS1B-206ENST00000474215 TICAM2Q86XR7 235 aa13.37□□□□□ -0.27
CKS1B-206ENST00000474215 SLAIN1Q8ND83 568 aa13.37□□□□□ -0.27
CKS1B-206ENST00000474215 PXYLP1Q8TE99 480 aa13.37□□□□□ -0.27
CKS1B-206ENST00000474215 RPAP3Q9H6T3 665 aaPredicted RBP13.37□□□□□ -0.27
CKS1B-206ENST00000474215 SH2D4AQ9H788 454 aa13.37□□□□□ -0.27
CKS1B-206ENST00000474215 MKNK2Q9HBH9 465 aa13.37□□□□□ -0.27
CKS1B-206ENST00000474215 EPB41L4AQ9HCS5 686 aaPredicted RBP13.37□□□□□ -0.27
CKS1B-206ENST00000474215 TMX2Q9Y320 296 aa13.37□□□□□ -0.27
CKS1B-206ENST00000474215 RABGAP1Q9Y3P9 1069 aa13.37□□□□□ -0.27
CKS1B-206ENST00000474215 EEF2P13639 858 aaKnown RBP13.36□□□□□ -0.27
CKS1B-206ENST00000474215 ELNP15502 786 aa13.36□□□□□ -0.27
CKS1B-206ENST00000474215 RASA1P20936 1047 aa13.36□□□□□ -0.27
CKS1B-206ENST00000474215 ERVK-9P63128 1117 aa13.36□□□□□ -0.27
CKS1B-206ENST00000474215 ERVK-24P63145 666 aa13.36□□□□□ -0.27
CKS1B-206ENST00000474215 UBXN2AP68543 259 aa13.36□□□□□ -0.27
CKS1B-206ENST00000474215 COG2Q14746 738 aa13.36□□□□□ -0.27
CKS1B-206ENST00000474215 CLEC10AQ8IUN9 316 aa13.36□□□□□ -0.27
CKS1B-206ENST00000474215 CCAR1Q8IX12 1150 aaKnown RBP13.36□□□□□ -0.27
CKS1B-206ENST00000474215 STK11IPQ8N1F8 1099 aa13.36□□□□□ -0.27
CKS1B-206ENST00000474215 LPAR1Q92633 364 aa13.36□□□□□ -0.27
CKS1B-206ENST00000474215 PAGR1Q9BTK6 254 aa13.36□□□□□ -0.27
CKS1B-206ENST00000474215 ZNF287Q9HBT7 754 aa13.36□□□□□ -0.27
CKS1B-206ENST00000474215 HOXC10Q9NYD6 342 aa13.36□□□□□ -0.27
CKS1B-206ENST00000474215 GJD2Q9UKL4 321 aa13.36□□□□□ -0.27
CKS1B-206ENST00000474215 BAZ2AQ9UIF9 1905 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms