RNA–Protein interactions for RNA: ENST00000474042.5

COPS7B-219, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-219ENST00000474042 TRMT44Q8IYL2 757 aaKnown RBP16.28■□□□□ 0.2
COPS7B-219ENST00000474042 RHPN1Q8TCX5 695 aa16.28■□□□□ 0.2
COPS7B-219ENST00000474042 FEZ1Q99689 392 aa16.28■□□□□ 0.2
COPS7B-219ENST00000474042 APBA2Q99767 749 aa16.28■□□□□ 0.2
COPS7B-219ENST00000474042 PAGR1Q9BTK6 254 aa16.28■□□□□ 0.2
COPS7B-219ENST00000474042 IL1RAPL2Q9NP60 686 aa16.28■□□□□ 0.2
COPS7B-219ENST00000474042 RABGAP1Q9Y3P9 1069 aa16.28■□□□□ 0.2
COPS7B-219ENST00000474042 PARP14Q460N5 1801 aa16.27■□□□□ 0.2
COPS7B-219ENST00000474042 USP17L15C9J2P7 530 aa16.27■□□□□ 0.2
COPS7B-219ENST00000474042 USP17L13C9JLJ4 530 aa16.27■□□□□ 0.2
COPS7B-219ENST00000474042 USP17L11C9JVI0 530 aa16.27■□□□□ 0.2
COPS7B-219ENST00000474042 USP17L18D6R9N7 530 aa16.27■□□□□ 0.2
COPS7B-219ENST00000474042 USP17L22D6RA61 530 aa16.27■□□□□ 0.2
COPS7B-219ENST00000474042 USP17L17D6RBQ6 530 aa16.27■□□□□ 0.2
COPS7B-219ENST00000474042 USP17L19D6RCP7 530 aa16.27■□□□□ 0.2
COPS7B-219ENST00000474042 USP17L20D6RJB6 530 aa16.27■□□□□ 0.2
COPS7B-219ENST00000474042 PDE6AP16499 860 aa16.27■□□□□ 0.2
COPS7B-219ENST00000474042 ZKSCAN1P17029 563 aaPredicted RBP16.27■□□□□ 0.2
COPS7B-219ENST00000474042 VCAM1P19320 739 aa16.27■□□□□ 0.2
COPS7B-219ENST00000474042 RGS2P41220 211 aa16.27■□□□□ 0.2
COPS7B-219ENST00000474042 PLCD1P51178 756 aa16.27■□□□□ 0.2
COPS7B-219ENST00000474042 USP14P54578 494 aa16.27■□□□□ 0.2
COPS7B-219ENST00000474042 USP17L24Q0WX57 530 aa16.27■□□□□ 0.2
COPS7B-219ENST00000474042 TTF1Q15361 905 aaPredicted RBP16.27■□□□□ 0.2
COPS7B-219ENST00000474042 ZYXQ15942 572 aaKnown RBP16.27■□□□□ 0.2
COPS7B-219ENST00000474042 ABCB5Q2M3G0 1257 aa16.27■□□□□ 0.2
COPS7B-219ENST00000474042 CERKLQ49MI3 558 aaPredicted RBP16.27■□□□□ 0.2
COPS7B-219ENST00000474042 LBX2Q6XYB7 198 aa16.27■□□□□ 0.2
COPS7B-219ENST00000474042 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.27■□□□□ 0.2
COPS7B-219ENST00000474042 NBPF3Q9H094 633 aa16.27■□□□□ 0.2
COPS7B-219ENST00000474042 BAZ2AQ9UIF9 1905 aaKnown RBP16.26■□□□□ 0.19
COPS7B-219ENST00000474042 MAGEB6P1A0A0J9YX57 407 aa16.26■□□□□ 0.19
COPS7B-219ENST00000474042 GUCY1A2P33402 732 aa16.26■□□□□ 0.19
COPS7B-219ENST00000474042 RAB3GAP1Q15042 981 aa16.26■□□□□ 0.19
COPS7B-219ENST00000474042 PLEKHH3Q7Z736 793 aa16.26■□□□□ 0.19
COPS7B-219ENST00000474042 ACER1Q8TDN7 264 aa16.26■□□□□ 0.19
COPS7B-219ENST00000474042 PFASO15067 1338 aa16.25■□□□□ 0.19
COPS7B-219ENST00000474042 TCRBV5S4A2TA0A5A2 114 aa16.25■□□□□ 0.19
COPS7B-219ENST00000474042 CACNB2Q08289 660 aaPredicted RBP16.25■□□□□ 0.19
COPS7B-219ENST00000474042 CCL14Q16627 93 aa16.25■□□□□ 0.19
COPS7B-219ENST00000474042 CATSPERGQ6ZRH7 1159 aa16.25■□□□□ 0.19
COPS7B-219ENST00000474042 KIF1BPQ96EK5 621 aa16.25■□□□□ 0.19
COPS7B-219ENST00000474042 CRNKL1Q9BZJ0 848 aaKnown RBP16.25■□□□□ 0.19
COPS7B-219ENST00000474042 C11orf49Q9H6J7 331 aa16.25■□□□□ 0.19
COPS7B-219ENST00000474042 ZNF532Q9HCE3 1301 aa16.24■□□□□ 0.19
COPS7B-219ENST00000474042 SPDYE16A6NNV3 312 aaPredicted RBP16.24■□□□□ 0.19
COPS7B-219ENST00000474042 EVX2Q03828 476 aa16.24■□□□□ 0.19
COPS7B-219ENST00000474042 MAP2K5Q13163 448 aa16.24■□□□□ 0.19
COPS7B-219ENST00000474042 SLC9C2Q5TAH2 1124 aa16.24■□□□□ 0.19
COPS7B-219ENST00000474042 CCAR1Q8IX12 1150 aaKnown RBP16.24■□□□□ 0.19
COPS7B-219ENST00000474042 SIRT2Q8IXJ6 389 aa16.24■□□□□ 0.19
COPS7B-219ENST00000474042 RPAP2Q8IXW5 612 aaPredicted RBP16.24■□□□□ 0.19
COPS7B-219ENST00000474042 C7orf61Q8IZ16 206 aa16.24■□□□□ 0.19
COPS7B-219ENST00000474042 CLASRPQ8N2M8 674 aaKnown RBP16.24■□□□□ 0.19
COPS7B-219ENST00000474042 GDF15Q99988 308 aa16.24■□□□□ 0.19
COPS7B-219ENST00000474042 CABP5Q9NP86 173 aa16.24■□□□□ 0.19
COPS7B-219ENST00000474042 LAMA3Q16787 3333 aa16.23■□□□□ 0.19
COPS7B-219ENST00000474042 GOLIM4O00461 696 aa16.23■□□□□ 0.19
COPS7B-219ENST00000474042 MS4A1P11836 297 aa16.23■□□□□ 0.19
COPS7B-219ENST00000474042 COL6A1P12109 1028 aa16.23■□□□□ 0.19
COPS7B-219ENST00000474042 CCND3P30281 292 aaPredicted RBP16.23■□□□□ 0.19
COPS7B-219ENST00000474042 BMP8BP34820 402 aa16.23■□□□□ 0.19
COPS7B-219ENST00000474042 CCNA1P78396 465 aa16.23■□□□□ 0.19
COPS7B-219ENST00000474042 SEPT2Q15019 361 aa16.23■□□□□ 0.19
COPS7B-219ENST00000474042 LHX8Q68G74 356 aa16.23■□□□□ 0.19
COPS7B-219ENST00000474042 LCORLQ8N3X6 602 aa16.23■□□□□ 0.19
COPS7B-219ENST00000474042 RPAP3Q9H6T3 665 aaPredicted RBP16.23■□□□□ 0.19
COPS7B-219ENST00000474042 ZBTB40Q9NUA8 1239 aa16.23■□□□□ 0.19
COPS7B-219ENST00000474042 BTBD7Q9P203 1132 aa16.23■□□□□ 0.19
COPS7B-219ENST00000474042 STAP2Q9UGK3 403 aa16.23■□□□□ 0.19
COPS7B-219ENST00000474042 DDX19BQ9UMR2 479 aa16.23■□□□□ 0.19
COPS7B-219ENST00000474042 SOX1O00570 391 aaPredicted RBP16.22■□□□□ 0.19
COPS7B-219ENST00000474042 HMMRO75330 724 aa16.22■□□□□ 0.19
COPS7B-219ENST00000474042 POLR3DP05423 398 aaPredicted RBP16.22■□□□□ 0.19
COPS7B-219ENST00000474042 HOXC6P09630 235 aa16.22■□□□□ 0.19
COPS7B-219ENST00000474042 GRB14Q14449 540 aa16.22■□□□□ 0.19
COPS7B-219ENST00000474042 DIEXFQ68CQ4 756 aaKnown RBP16.22■□□□□ 0.19
COPS7B-219ENST00000474042 SDR42E1Q8WUS8 393 aa16.22■□□□□ 0.19
COPS7B-219ENST00000474042 DNAJC2Q99543 621 aaKnown RBP16.22■□□□□ 0.19
COPS7B-219ENST00000474042 DCP1AQ9NPI6 582 aaPredicted RBP16.22■□□□□ 0.19
COPS7B-219ENST00000474042 MCM9Q9NXL9 1143 aa16.22■□□□□ 0.19
COPS7B-219ENST00000474042 ZMYND8Q9ULU4 1186 aaPredicted RBP16.22■□□□□ 0.19
COPS7B-219ENST00000474042 A0A1W2PRG0 241 aa16.21■□□□□ 0.19
COPS7B-219ENST00000474042 SLC15A5A6NIM6 579 aa16.21■□□□□ 0.19
COPS7B-219ENST00000474042 RAB11FIP3O75154 756 aa16.21■□□□□ 0.19
COPS7B-219ENST00000474042 GLRX3O76003 335 aaKnown RBP16.21■□□□□ 0.19
COPS7B-219ENST00000474042 IFIT2P09913 472 aaKnown RBP16.21■□□□□ 0.19
COPS7B-219ENST00000474042 PTPREP23469 700 aa16.21■□□□□ 0.19
COPS7B-219ENST00000474042 SLC44A5Q8NCS7 719 aa16.21■□□□□ 0.19
COPS7B-219ENST00000474042 EDC3Q96F86 508 aaKnown RBP16.21■□□□□ 0.19
COPS7B-219ENST00000474042 CWC22Q9HCG8 908 aaKnown RBP16.21■□□□□ 0.19
COPS7B-219ENST00000474042 FLRT1Q9NZU1 646 aa16.21■□□□□ 0.19
COPS7B-219ENST00000474042 GREB1LQ9C091 1923 aaPredicted RBP16.2■□□□□ 0.18
COPS7B-219ENST00000474042 APBB1O00213 710 aa16.2■□□□□ 0.18
COPS7B-219ENST00000474042 IGHA2P01877 340 aa16.2■□□□□ 0.18
COPS7B-219ENST00000474042 CYP2D6P10635 497 aa16.2■□□□□ 0.18
COPS7B-219ENST00000474042 ADD2P35612 726 aa16.2■□□□□ 0.18
COPS7B-219ENST00000474042 TMEM179Q6ZVK1 233 aa16.2■□□□□ 0.18
COPS7B-219ENST00000474042 COG6Q9Y2V7 657 aa16.2■□□□□ 0.18
COPS7B-219ENST00000474042 COL11A1P12107 1806 aaPredicted RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms