RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 P2RX7Q99572 595 aaKnown RBP6.35□□□□□ -1.39
SNRNP40-204ENST00000474025 NUDT12Q9BQG2 462 aa6.35□□□□□ -1.39
SNRNP40-204ENST00000474025 WDR18Q9BV38 432 aa6.35□□□□□ -1.39
SNRNP40-204ENST00000474025 HERC5Q9UII4 1024 aaKnown RBP6.35□□□□□ -1.39
SNRNP40-204ENST00000474025 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.35□□□□□ -1.39
SNRNP40-204ENST00000474025 SIPA1L1O43166 1804 aa6.34□□□□□ -1.39
SNRNP40-204ENST00000474025 TRANK1O15050 2925 aa6.34□□□□□ -1.39
SNRNP40-204ENST00000474025 E9PSI1 815 aa6.34□□□□□ -1.39
SNRNP40-204ENST00000474025 ANP32CO43423 234 aa6.34□□□□□ -1.39
SNRNP40-204ENST00000474025 ASNSP08243 561 aa6.34□□□□□ -1.39
SNRNP40-204ENST00000474025 CCND3P30281 292 aaPredicted RBP6.34□□□□□ -1.39
SNRNP40-204ENST00000474025 MAPK4P31152 587 aa6.34□□□□□ -1.39
SNRNP40-204ENST00000474025 BACE1P56817 501 aa6.34□□□□□ -1.39
SNRNP40-204ENST00000474025 ERVK-9P63128 1117 aa6.34□□□□□ -1.39
SNRNP40-204ENST00000474025 ERVK-24P63145 666 aa6.34□□□□□ -1.39
SNRNP40-204ENST00000474025 GSTO1P78417 241 aa6.34□□□□□ -1.39
SNRNP40-204ENST00000474025 JAG1P78504 1218 aa6.34□□□□□ -1.39
SNRNP40-204ENST00000474025 MDM2Q00987 491 aaPredicted RBP6.34□□□□□ -1.39
SNRNP40-204ENST00000474025 PDE3AQ14432 1141 aa6.34□□□□□ -1.39
SNRNP40-204ENST00000474025 CCL14Q16627 93 aa6.34□□□□□ -1.39
SNRNP40-204ENST00000474025 SHROOM1Q2M3G4 852 aaPredicted RBP6.34□□□□□ -1.39
SNRNP40-204ENST00000474025 ALDH1L2Q3SY69 923 aa6.34□□□□□ -1.39
SNRNP40-204ENST00000474025 MORN1Q5T089 497 aa6.34□□□□□ -1.39
SNRNP40-204ENST00000474025 POTEEQ6S8J3 1075 aa6.34□□□□□ -1.39
SNRNP40-204ENST00000474025 TBC1D9Q6ZT07 1266 aa6.34□□□□□ -1.39
SNRNP40-204ENST00000474025 METTL16Q86W50 562 aaKnown RBP6.34□□□□□ -1.39
SNRNP40-204ENST00000474025 TEX11Q8IYF3 940 aa6.34□□□□□ -1.39
SNRNP40-204ENST00000474025 TRMT44Q8IYL2 757 aaKnown RBP6.34□□□□□ -1.39
SNRNP40-204ENST00000474025 FAM9BQ8IZU0 186 aa6.34□□□□□ -1.39
SNRNP40-204ENST00000474025 GPRC5AQ8NFJ5 357 aa6.34□□□□□ -1.39
SNRNP40-204ENST00000474025 MEIS3Q99687 375 aa6.34□□□□□ -1.39
SNRNP40-204ENST00000474025 APBA2Q99767 749 aa6.34□□□□□ -1.39
SNRNP40-204ENST00000474025 PORCNQ9H237 461 aa6.34□□□□□ -1.39
SNRNP40-204ENST00000474025 DNAJC18Q9H819 358 aa6.34□□□□□ -1.39
SNRNP40-204ENST00000474025 AS3MTQ9HBK9 375 aa6.34□□□□□ -1.39
SNRNP40-204ENST00000474025 SMC4Q9NTJ3 1288 aa6.34□□□□□ -1.39
SNRNP40-204ENST00000474025 HMG20BQ9P0W2 317 aa6.34□□□□□ -1.39
SNRNP40-204ENST00000474025 RBPJLQ9UBG7 517 aa6.34□□□□□ -1.39
SNRNP40-204ENST00000474025 MAST2Q6P0Q8 1798 aa6.34□□□□□ -1.4
SNRNP40-204ENST00000474025 LDHCP07864 332 aa6.33□□□□□ -1.4
SNRNP40-204ENST00000474025 ARID4AP29374 1257 aaPredicted RBP6.33□□□□□ -1.4
SNRNP40-204ENST00000474025 RGS2P41220 211 aa6.33□□□□□ -1.4
SNRNP40-204ENST00000474025 TFCP2Q12800 502 aa6.33□□□□□ -1.4
SNRNP40-204ENST00000474025 Q3C1V9 767 aa6.33□□□□□ -1.4
SNRNP40-204ENST00000474025 GPR142Q7Z601 462 aa6.33□□□□□ -1.4
SNRNP40-204ENST00000474025 SPATA5Q8NB90 893 aa6.33□□□□□ -1.4
SNRNP40-204ENST00000474025 SH3RF3Q8TEJ3 882 aaPredicted RBP6.33□□□□□ -1.4
SNRNP40-204ENST00000474025 FAM122AQ96E09 287 aa6.33□□□□□ -1.4
SNRNP40-204ENST00000474025 DHX36Q9H2U1 1008 aaKnown RBP6.33□□□□□ -1.4
SNRNP40-204ENST00000474025 TMOD4Q9NZQ9 345 aa6.33□□□□□ -1.4
SNRNP40-204ENST00000474025 PI4KBQ9UBF8 816 aa6.33□□□□□ -1.4
SNRNP40-204ENST00000474025 ZBTB21Q9ULJ3 1066 aa6.33□□□□□ -1.4
SNRNP40-204ENST00000474025 AKAP2Q9Y2D5 859 aa6.33□□□□□ -1.4
SNRNP40-204ENST00000474025 FRMPD3Q5JV73 1810 aa6.33□□□□□ -1.4
SNRNP40-204ENST00000474025 FLT1P17948 1338 aa6.32□□□□□ -1.4
SNRNP40-204ENST00000474025 C19orf81C9J6K1 198 aa6.32□□□□□ -1.4
SNRNP40-204ENST00000474025 USP17L10C9JJH3 530 aa6.32□□□□□ -1.4
SNRNP40-204ENST00000474025 SRGAP3O43295 1099 aa6.32□□□□□ -1.4
SNRNP40-204ENST00000474025 GDF11O95390 407 aa6.32□□□□□ -1.4
SNRNP40-204ENST00000474025 COL9A1P20849 921 aa6.32□□□□□ -1.4
SNRNP40-204ENST00000474025 MCAMP43121 646 aa6.32□□□□□ -1.4
SNRNP40-204ENST00000474025 SLFN5Q08AF3 891 aa6.32□□□□□ -1.4
SNRNP40-204ENST00000474025 MTX1Q13505 466 aa6.32□□□□□ -1.4
SNRNP40-204ENST00000474025 PLEKHH3Q7Z736 793 aa6.32□□□□□ -1.4
SNRNP40-204ENST00000474025 CCAR1Q8IX12 1150 aaKnown RBP6.32□□□□□ -1.4
SNRNP40-204ENST00000474025 HS6ST3Q8IZP7 471 aa6.32□□□□□ -1.4
SNRNP40-204ENST00000474025 GTF3C2Q8WUA4 911 aaPredicted RBP6.32□□□□□ -1.4
SNRNP40-204ENST00000474025 FAM161BQ96MY7 647 aa6.32□□□□□ -1.4
SNRNP40-204ENST00000474025 LBHD1Q9BQE6 289 aaPredicted RBP6.32□□□□□ -1.4
SNRNP40-204ENST00000474025 PAGR1Q9BTK6 254 aa6.32□□□□□ -1.4
SNRNP40-204ENST00000474025 EMILIN3Q9NT22 766 aa6.32□□□□□ -1.4
SNRNP40-204ENST00000474025 GINM1Q9NU53 330 aa6.32□□□□□ -1.4
SNRNP40-204ENST00000474025 AATFQ9NY61 560 aaKnown RBP eCLIP6.32□□□□□ -1.4
SNRNP40-204ENST00000474025 RAI14Q9P0K7 980 aa6.32□□□□□ -1.4
SNRNP40-204ENST00000474025 HDAC5Q9UQL6 1122 aa6.32□□□□□ -1.4
SNRNP40-204ENST00000474025 LTBP2Q14767 1821 aa6.32□□□□□ -1.4
SNRNP40-204ENST00000474025 C2orf72A6NCS6 295 aa6.31□□□□□ -1.4
SNRNP40-204ENST00000474025 DNM1LO00429 736 aa6.31□□□□□ -1.4
SNRNP40-204ENST00000474025 CNMDO75829 334 aa6.31□□□□□ -1.4
SNRNP40-204ENST00000474025 IGHA2P01877 340 aa6.31□□□□□ -1.4
SNRNP40-204ENST00000474025 HOXC6P09630 235 aa6.31□□□□□ -1.4
SNRNP40-204ENST00000474025 PLA2G5P39877 138 aa6.31□□□□□ -1.4
SNRNP40-204ENST00000474025 PPP4CP60510 307 aa6.31□□□□□ -1.4
SNRNP40-204ENST00000474025 MAP2K5Q13163 448 aa6.31□□□□□ -1.4
SNRNP40-204ENST00000474025 VARS2Q5ST30 1063 aaKnown RBP6.31□□□□□ -1.4
SNRNP40-204ENST00000474025 GORABQ5T7V8 394 aa6.31□□□□□ -1.4
SNRNP40-204ENST00000474025 ZNF697Q5TEC3 545 aa6.31□□□□□ -1.4
SNRNP40-204ENST00000474025 MFSD14CQ5VZR4 134 aa6.31□□□□□ -1.4
SNRNP40-204ENST00000474025 USP17L2Q6R6M4 530 aa6.31□□□□□ -1.4
SNRNP40-204ENST00000474025 ADGRA1Q86SQ6 560 aa6.31□□□□□ -1.4
SNRNP40-204ENST00000474025 MAPKAPK5Q8IW41 473 aa6.31□□□□□ -1.4
SNRNP40-204ENST00000474025 ZNF687Q8N1G0 1237 aa6.31□□□□□ -1.4
SNRNP40-204ENST00000474025 CRACR2BQ8N4Y2 399 aaPredicted RBP6.31□□□□□ -1.4
SNRNP40-204ENST00000474025 TGFBRAP1Q8WUH2 860 aa6.31□□□□□ -1.4
SNRNP40-204ENST00000474025 BBXQ8WY36 941 aaPredicted RBP6.31□□□□□ -1.4
SNRNP40-204ENST00000474025 LPAR1Q92633 364 aa6.31□□□□□ -1.4
SNRNP40-204ENST00000474025 C12orf42Q96LP6 360 aa6.31□□□□□ -1.4
SNRNP40-204ENST00000474025 NEUROD6Q96NK8 337 aa6.31□□□□□ -1.4
SNRNP40-204ENST00000474025 NOL10Q9BSC4 688 aaKnown RBP6.31□□□□□ -1.4
SNRNP40-204ENST00000474025 API5Q9BZZ5 524 aaKnown RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms