RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 SMYD4Q8IYR2 804 aaPredicted RBP12.51□□□□□ -0.41
C9orf3-214ENST00000473778 ENOX1Q8TC92 643 aaKnown RBP12.51□□□□□ -0.41
C9orf3-214ENST00000473778 RIOK1Q9BRS2 568 aaKnown RBP12.51□□□□□ -0.41
C9orf3-214ENST00000473778 DESI2Q9BSY9 194 aa12.51□□□□□ -0.41
C9orf3-214ENST00000473778 NACAP1Q9BZK3 213 aa12.51□□□□□ -0.41
C9orf3-214ENST00000473778 MYH13Q9UKX3 1938 aa12.51□□□□□ -0.41
C9orf3-214ENST00000473778 VEGFAP15692 232 aaPredicted RBP12.51□□□□□ -0.41
C9orf3-214ENST00000473778 GNAT2P19087 354 aa12.51□□□□□ -0.41
C9orf3-214ENST00000473778 DYNLL1P63167 89 aaKnown RBP12.51□□□□□ -0.41
C9orf3-214ENST00000473778 SART3Q15020 963 aaKnown RBP12.51□□□□□ -0.41
C9orf3-214ENST00000473778 ZNF579Q8NAF0 562 aaKnown RBP12.51□□□□□ -0.41
C9orf3-214ENST00000473778 SMARCE1Q969G3 411 aa12.51□□□□□ -0.41
C9orf3-214ENST00000473778 AK7Q96M32 723 aa12.51□□□□□ -0.41
C9orf3-214ENST00000473778 BAG1Q99933 345 aaPredicted RBP12.51□□□□□ -0.41
C9orf3-214ENST00000473778 FHOD1Q9Y613 1164 aa12.51□□□□□ -0.41
C9orf3-214ENST00000473778 WNK3Q9BYP7 1800 aa12.5□□□□□ -0.41
C9orf3-214ENST00000473778 EXOC5O00471 708 aa12.5□□□□□ -0.41
C9orf3-214ENST00000473778 ARHGAP6O43182 974 aa12.5□□□□□ -0.41
C9orf3-214ENST00000473778 AFMP43652 599 aa12.5□□□□□ -0.41
C9orf3-214ENST00000473778 NR1I3Q14994 352 aa12.5□□□□□ -0.41
C9orf3-214ENST00000473778 SPECC1LQ69YQ0 1117 aa12.5□□□□□ -0.41
C9orf3-214ENST00000473778 ZNF771Q7L3S4 317 aaPredicted RBP12.5□□□□□ -0.41
C9orf3-214ENST00000473778 KRT222Q8N1A0 295 aa12.5□□□□□ -0.41
C9orf3-214ENST00000473778 MLKLQ8NB16 471 aa12.5□□□□□ -0.41
C9orf3-214ENST00000473778 DHX58Q96C10 678 aa12.5□□□□□ -0.41
C9orf3-214ENST00000473778 ACSBG1Q96GR2 724 aa12.5□□□□□ -0.41
C9orf3-214ENST00000473778 UBAC1Q9BSL1 405 aa12.5□□□□□ -0.41
C9orf3-214ENST00000473778 PHF20Q9BVI0 1012 aa12.5□□□□□ -0.41
C9orf3-214ENST00000473778 IRX2Q9BZI1 471 aaPredicted RBP12.5□□□□□ -0.41
C9orf3-214ENST00000473778 LAMB2P55268 1798 aa12.5□□□□□ -0.41
C9orf3-214ENST00000473778 COL16A1Q07092 1604 aaPredicted RBP12.5□□□□□ -0.41
C9orf3-214ENST00000473778 A0A0G2JS52 829 aa12.5□□□□□ -0.41
C9orf3-214ENST00000473778 ERICH2A1L162 156 aa12.5□□□□□ -0.41
C9orf3-214ENST00000473778 COBLO75128 1261 aa12.5□□□□□ -0.41
C9orf3-214ENST00000473778 TADA3O75528 432 aa12.5□□□□□ -0.41
C9orf3-214ENST00000473778 URI1O94763 535 aaPredicted RBP12.5□□□□□ -0.41
C9orf3-214ENST00000473778 DPYDQ12882 1025 aa12.5□□□□□ -0.41
C9orf3-214ENST00000473778 CARD6Q9BX69 1037 aa12.5□□□□□ -0.41
C9orf3-214ENST00000473778 CCDC87Q9NVE4 849 aa12.5□□□□□ -0.41
C9orf3-214ENST00000473778 NIP7Q9Y221 180 aaKnown RBP eCLIP12.5□□□□□ -0.41
C9orf3-214ENST00000473778 ZNF804BA4D1E1 1349 aa12.5□□□□□ -0.41
C9orf3-214ENST00000473778 NRDCO43847 1150 aa12.49□□□□□ -0.41
C9orf3-214ENST00000473778 NMT2O60551 498 aa12.49□□□□□ -0.41
C9orf3-214ENST00000473778 ATP6V1AP38606 617 aa12.49□□□□□ -0.41
C9orf3-214ENST00000473778 STX17P56962 302 aa12.49□□□□□ -0.41
C9orf3-214ENST00000473778 CCDC152Q4G0S7 254 aa12.49□□□□□ -0.41
C9orf3-214ENST00000473778 PAXIP1Q6ZW49 1069 aaPredicted RBP12.49□□□□□ -0.41
C9orf3-214ENST00000473778 STAMQ92783 540 aa12.49□□□□□ -0.41
C9orf3-214ENST00000473778 SYMPKQ92797 1274 aaKnown RBP12.49□□□□□ -0.41
C9orf3-214ENST00000473778 KIFC2Q96AC6 838 aa12.49□□□□□ -0.41
C9orf3-214ENST00000473778 RNF26Q9BY78 433 aaPredicted RBP12.49□□□□□ -0.41
C9orf3-214ENST00000473778 MRPL44Q9H9J2 332 aaKnown RBP12.49□□□□□ -0.41
C9orf3-214ENST00000473778 V9GY48 417 aaPredicted RBP12.49□□□□□ -0.41
C9orf3-214ENST00000473778 MYO1BO43795 1136 aa12.49□□□□□ -0.41
C9orf3-214ENST00000473778 KLRK1P26718 216 aa12.49□□□□□ -0.41
C9orf3-214ENST00000473778 IGHMBP2P38935 993 aaKnown RBP12.49□□□□□ -0.41
C9orf3-214ENST00000473778 TROAPQ12815 778 aa12.49□□□□□ -0.41
C9orf3-214ENST00000473778 DHX8Q14562 1220 aaKnown RBP12.49□□□□□ -0.41
C9orf3-214ENST00000473778 TERF2Q15554 542 aa12.49□□□□□ -0.41
C9orf3-214ENST00000473778 KLHL10Q6JEL2 608 aa12.49□□□□□ -0.41
C9orf3-214ENST00000473778 TNFRSF25Q93038 417 aa12.49□□□□□ -0.41
C9orf3-214ENST00000473778 ANAPC4Q9UJX5 808 aa12.49□□□□□ -0.41
C9orf3-214ENST00000473778 DLEC1Q9Y238 1755 aa12.49□□□□□ -0.41
C9orf3-214ENST00000473778 COL14A1Q05707 1796 aaKnown RBP12.48□□□□□ -0.41
C9orf3-214ENST00000473778 MAGEB6P1A0A0J9YX57 407 aa12.48□□□□□ -0.41
C9orf3-214ENST00000473778 A0A1B0GTH6 734 aa12.48□□□□□ -0.41
C9orf3-214ENST00000473778 CCDC196A0A1B0GTZ2 297 aa12.48□□□□□ -0.41
C9orf3-214ENST00000473778 SOWAHDA6NJG2 315 aa12.48□□□□□ -0.41
C9orf3-214ENST00000473778 STX10O60499 249 aa12.48□□□□□ -0.41
C9orf3-214ENST00000473778 PLCD1P51178 756 aa12.48□□□□□ -0.41
C9orf3-214ENST00000473778 CUL4BQ13620 913 aa12.48□□□□□ -0.41
C9orf3-214ENST00000473778 SMIM5Q71RC9 77 aa12.48□□□□□ -0.41
C9orf3-214ENST00000473778 SH3RF1Q7Z6J0 888 aa12.48□□□□□ -0.41
C9orf3-214ENST00000473778 FCHSD1Q86WN1 690 aa12.48□□□□□ -0.41
C9orf3-214ENST00000473778 TMTC2Q8N394 836 aa12.48□□□□□ -0.41
C9orf3-214ENST00000473778 PAGE5Q96GU1 130 aa12.48□□□□□ -0.41
C9orf3-214ENST00000473778 ZSCAN10Q96SZ4 725 aaPredicted RBP12.48□□□□□ -0.41
C9orf3-214ENST00000473778 MTA3Q9BTC8 594 aa12.48□□□□□ -0.41
C9orf3-214ENST00000473778 AATFQ9NY61 560 aaKnown RBP eCLIP12.48□□□□□ -0.41
C9orf3-214ENST00000473778 RAI14Q9P0K7 980 aa12.48□□□□□ -0.41
C9orf3-214ENST00000473778 MYH8P13535 1937 aa12.48□□□□□ -0.41
C9orf3-214ENST00000473778 SCN7AQ01118 1682 aa12.48□□□□□ -0.41
C9orf3-214ENST00000473778 ZRANB2O95218 330 aaKnown RBP eCLIP12.48□□□□□ -0.41
C9orf3-214ENST00000473778 RCAN1P53805 252 aa12.48□□□□□ -0.41
C9orf3-214ENST00000473778 GABPB1Q06547 395 aaPredicted RBP12.48□□□□□ -0.41
C9orf3-214ENST00000473778 NUTM2AQ8IVF1 878 aaPredicted RBP12.48□□□□□ -0.41
C9orf3-214ENST00000473778 ESR2Q92731 530 aa12.48□□□□□ -0.41
C9orf3-214ENST00000473778 RNF41Q9H4P4 317 aaPredicted RBP12.48□□□□□ -0.41
C9orf3-214ENST00000473778 RREB1Q92766 1687 aa12.48□□□□□ -0.41
C9orf3-214ENST00000473778 RTL9Q8NET4 1388 aa12.47□□□□□ -0.41
C9orf3-214ENST00000473778 LOC102724428A0A0B4J2F2 783 aa12.47□□□□□ -0.41
C9orf3-214ENST00000473778 TRIM75PA6NK02 468 aa12.47□□□□□ -0.41
C9orf3-214ENST00000473778 SEC31AO94979 1220 aaKnown RBP12.47□□□□□ -0.41
C9orf3-214ENST00000473778 TUBB4AP04350 444 aa12.47□□□□□ -0.41
C9orf3-214ENST00000473778 SIK1P57059 783 aa12.47□□□□□ -0.41
C9orf3-214ENST00000473778 KARSQ15046 597 aaKnown RBP12.47□□□□□ -0.41
C9orf3-214ENST00000473778 ZNF174Q15697 407 aa12.47□□□□□ -0.41
C9orf3-214ENST00000473778 TRIML1Q8N9V2 468 aa12.47□□□□□ -0.41
C9orf3-214ENST00000473778 MTRQ99707 1265 aa12.47□□□□□ -0.41
C9orf3-214ENST00000473778 HOOK1Q9UJC3 728 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms