RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 DYMQ7RTS9 669 aa3.57□□□□□ -1.84
CALD1-216ENST00000473714 SAMD9LQ8IVG5 1584 aa3.57□□□□□ -1.84
CALD1-216ENST00000473714 BSNDQ8WZ55 320 aa3.57□□□□□ -1.84
CALD1-216ENST00000473714 DDX17Q92841 729 aaKnown RBP3.57□□□□□ -1.84
CALD1-216ENST00000473714 ABHD8Q96I13 439 aa3.57□□□□□ -1.84
CALD1-216ENST00000473714 MKNK1Q9BUB5 465 aa3.57□□□□□ -1.84
CALD1-216ENST00000473714 ANO2Q9NQ90 1003 aa3.57□□□□□ -1.84
CALD1-216ENST00000473714 PRDM10Q9NQV6 1147 aa3.57□□□□□ -1.84
CALD1-216ENST00000473714 C1GALT1Q9NS00 363 aa3.57□□□□□ -1.84
CALD1-216ENST00000473714 DZANK1Q9NVP4 752 aa3.57□□□□□ -1.84
CALD1-216ENST00000473714 CASZ1Q86V15 1759 aa3.56□□□□□ -1.84
CALD1-216ENST00000473714 ADGRB2O60241 1585 aa3.56□□□□□ -1.84
CALD1-216ENST00000473714 SLIT2O94813 1529 aa3.56□□□□□ -1.84
CALD1-216ENST00000473714 ADCY9O60503 1353 aa3.56□□□□□ -1.84
CALD1-216ENST00000473714 H3BRB1 525 aa3.56□□□□□ -1.84
CALD1-216ENST00000473714 NFKBIEO00221 500 aa3.56□□□□□ -1.84
CALD1-216ENST00000473714 ZBTB39O15060 712 aa3.56□□□□□ -1.84
CALD1-216ENST00000473714 TMEM253P0C7T8 217 aa3.56□□□□□ -1.84
CALD1-216ENST00000473714 HOXA5P20719 270 aa3.56□□□□□ -1.84
CALD1-216ENST00000473714 MAPK1P28482 360 aa3.56□□□□□ -1.84
CALD1-216ENST00000473714 HTRA3P83110 453 aa3.56□□□□□ -1.84
CALD1-216ENST00000473714 GSTM4Q03013 218 aa3.56□□□□□ -1.84
CALD1-216ENST00000473714 OCLNQ16625 522 aa3.56□□□□□ -1.84
CALD1-216ENST00000473714 PRR23BQ6ZRT6 265 aa3.56□□□□□ -1.84
CALD1-216ENST00000473714 ARHGAP27Q6ZUM4 889 aa3.56□□□□□ -1.84
CALD1-216ENST00000473714 TMC1Q8TDI8 760 aa3.56□□□□□ -1.84
CALD1-216ENST00000473714 GPR152Q8TDT2 470 aa3.56□□□□□ -1.84
CALD1-216ENST00000473714 GIPC2Q8TF65 315 aa3.56□□□□□ -1.84
CALD1-216ENST00000473714 SLC26A8Q96RN1 970 aa3.56□□□□□ -1.84
CALD1-216ENST00000473714 TUT1Q9H6E5 874 aaKnown RBP3.56□□□□□ -1.84
CALD1-216ENST00000473714 SOX17Q9H6I2 414 aaPredicted RBP3.56□□□□□ -1.84
CALD1-216ENST00000473714 ACSS3Q9H6R3 686 aa3.56□□□□□ -1.84
CALD1-216ENST00000473714 ELP3Q9H9T3 547 aa3.56□□□□□ -1.84
CALD1-216ENST00000473714 CRIM1Q9NZV1 1036 aa3.56□□□□□ -1.84
CALD1-216ENST00000473714 TMEM63CQ9P1W3 806 aa3.56□□□□□ -1.84
CALD1-216ENST00000473714 SALL4Q9UJQ4 1053 aa3.56□□□□□ -1.84
CALD1-216ENST00000473714 PDE4DIPQ5VU43 2346 aa3.55□□□□□ -1.84
CALD1-216ENST00000473714 GPATCH8Q9UKJ3 1502 aaKnown RBP3.55□□□□□ -1.84
CALD1-216ENST00000473714 ANKRD33BA6NCL7 494 aa3.55□□□□□ -1.84
CALD1-216ENST00000473714 PSPNO60542 156 aa3.55□□□□□ -1.84
CALD1-216ENST00000473714 CES1P23141 567 aa3.55□□□□□ -1.84
CALD1-216ENST00000473714 ZAP70P43403 619 aa3.55□□□□□ -1.84
CALD1-216ENST00000473714 AFMP43652 599 aa3.55□□□□□ -1.84
CALD1-216ENST00000473714 ASPAP45381 313 aa3.55□□□□□ -1.84
CALD1-216ENST00000473714 VPS72Q15906 364 aa3.55□□□□□ -1.84
CALD1-216ENST00000473714 IFI16Q16666 785 aaKnown RBP3.55□□□□□ -1.84
CALD1-216ENST00000473714 AKAP4Q5JQC9 854 aa3.55□□□□□ -1.84
CALD1-216ENST00000473714 HP1BP3Q5SSJ5 553 aaPredicted RBP3.55□□□□□ -1.84
CALD1-216ENST00000473714 PDE12Q6L8Q7 609 aaKnown RBP3.55□□□□□ -1.84
CALD1-216ENST00000473714 PHLDB3Q6NSJ2 640 aa3.55□□□□□ -1.84
CALD1-216ENST00000473714 C16orf46Q6P387 395 aa3.55□□□□□ -1.84
CALD1-216ENST00000473714 SEZ6L2Q6UXD5 910 aa3.55□□□□□ -1.84
CALD1-216ENST00000473714 ZSCAN29Q8IWY8 852 aaPredicted RBP3.55□□□□□ -1.84
CALD1-216ENST00000473714 FAM181AQ8N9Y4 354 aa3.55□□□□□ -1.84
CALD1-216ENST00000473714 FBXO15Q8NCQ5 510 aaPredicted RBP3.55□□□□□ -1.84
CALD1-216ENST00000473714 MRRFQ96E11 262 aaKnown RBP3.55□□□□□ -1.84
CALD1-216ENST00000473714 HRASLS5Q96KN8 279 aa3.55□□□□□ -1.84
CALD1-216ENST00000473714 C20orf173Q96LM9 149 aa3.55□□□□□ -1.84
CALD1-216ENST00000473714 LGR6Q9HBX8 967 aa3.55□□□□□ -1.84
CALD1-216ENST00000473714 RAD18Q9NS91 495 aa3.55□□□□□ -1.84
CALD1-216ENST00000473714 CNTN3Q9P232 1028 aa3.55□□□□□ -1.84
CALD1-216ENST00000473714 DAGLAQ9Y4D2 1042 aa3.55□□□□□ -1.84
CALD1-216ENST00000473714 INO80Q9ULG1 1556 aaPredicted RBP3.55□□□□□ -1.84
CALD1-216ENST00000473714 FMN1Q68DA7 1419 aa3.54□□□□□ -1.84
CALD1-216ENST00000473714 SPAG9O60271 1321 aaKnown RBP3.54□□□□□ -1.84
CALD1-216ENST00000473714 TMEM265A0A087WTH1 108 aa3.54□□□□□ -1.84
CALD1-216ENST00000473714 RBM47A0AV96 593 aaKnown RBP3.54□□□□□ -1.84
CALD1-216ENST00000473714 DYNC1LI2O43237 492 aaPredicted RBP3.54□□□□□ -1.84
CALD1-216ENST00000473714 FOXD2O60548 495 aaPredicted RBP3.54□□□□□ -1.84
CALD1-216ENST00000473714 ZBTB7AO95365 584 aa3.54□□□□□ -1.84
CALD1-216ENST00000473714 KRT1P04264 644 aa3.54□□□□□ -1.84
CALD1-216ENST00000473714 ZNF211Q13398 564 aaPredicted RBP3.54□□□□□ -1.84
CALD1-216ENST00000473714 NAA30Q147X3 362 aaPredicted RBP3.54□□□□□ -1.84
CALD1-216ENST00000473714 KCNA10Q16322 511 aa3.54□□□□□ -1.84
CALD1-216ENST00000473714 VN1R5Q7Z5H4 357 aa3.54□□□□□ -1.84
CALD1-216ENST00000473714 TMEM102Q8N9M5 508 aaPredicted RBP3.54□□□□□ -1.84
CALD1-216ENST00000473714 ZNF526Q8TF50 670 aaPredicted RBP3.54□□□□□ -1.84
CALD1-216ENST00000473714 GTF3C2Q8WUA4 911 aaPredicted RBP3.54□□□□□ -1.84
CALD1-216ENST00000473714 NXPE3Q969Y0 559 aa3.54□□□□□ -1.84
CALD1-216ENST00000473714 ZFYVE1Q9HBF4 777 aa3.54□□□□□ -1.84
CALD1-216ENST00000473714 FAM105AQ9NUU6 356 aa3.54□□□□□ -1.84
CALD1-216ENST00000473714 CROCC2H7BZ55 1655 aa3.54□□□□□ -1.84
CALD1-216ENST00000473714 COL22A1Q8NFW1 1626 aaPredicted RBP3.54□□□□□ -1.84
CALD1-216ENST00000473714 EFCAB6Q5THR3 1501 aa3.54□□□□□ -1.84
CALD1-216ENST00000473714 MYOM2P54296 1465 aa3.54□□□□□ -1.84
CALD1-216ENST00000473714 DCCP43146 1447 aa3.53□□□□□ -1.84
CALD1-216ENST00000473714 TMEM2Q9UHN6 1383 aa3.53□□□□□ -1.84
CALD1-216ENST00000473714 WASHC2CQ9Y4E1 1318 aa3.53□□□□□ -1.84
CALD1-216ENST00000473714 PREX2Q70Z35 1606 aa3.53□□□□□ -1.84
CALD1-216ENST00000473714 A6NHS1 94 aa3.53□□□□□ -1.84
CALD1-216ENST00000473714 CCDC85CA6NKD9 419 aa3.53□□□□□ -1.84
CALD1-216ENST00000473714 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.53□□□□□ -1.84
CALD1-216ENST00000473714 TRIM37O94972 964 aa3.53□□□□□ -1.84
CALD1-216ENST00000473714 GLI1P08151 1106 aa3.53□□□□□ -1.84
CALD1-216ENST00000473714 ESRRAP11474 423 aaPredicted RBP3.53□□□□□ -1.84
CALD1-216ENST00000473714 TMEM67Q5HYA8 995 aa3.53□□□□□ -1.84
CALD1-216ENST00000473714 ZNF438Q7Z4V0 828 aa3.53□□□□□ -1.84
CALD1-216ENST00000473714 PMEPA1Q969W9 287 aa3.53□□□□□ -1.84
CALD1-216ENST00000473714 PDGFDQ9GZP0 370 aaPredicted RBP3.53□□□□□ -1.84
CALD1-216ENST00000473714 MTFR1LQ9H019 292 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms