RNA–Protein interactions for RNA: ENST00000473380.1

MSL3-211, Transcript of MSL complex subunit 3, humanhuman

TSL 3

Gene MSL3, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-211ENST00000473380 RAPGEF1Q13905 1077 aa5.83□□□□□ -1.48
MSL3-211ENST00000473380 HGSNATQ68CP4 663 aa5.83□□□□□ -1.48
MSL3-211ENST00000473380 BEND4Q6ZU67 534 aa5.83□□□□□ -1.48
MSL3-211ENST00000473380 TMC4Q7Z404 712 aa5.83□□□□□ -1.48
MSL3-211ENST00000473380 ATCAYQ86WG3 371 aa5.83□□□□□ -1.48
MSL3-211ENST00000473380 SLC39A13Q96H72 371 aa5.83□□□□□ -1.48
MSL3-211ENST00000473380 RNPC3Q96LT9 517 aaKnown RBP5.83□□□□□ -1.48
MSL3-211ENST00000473380 FAM83CQ9BQN1 747 aa5.83□□□□□ -1.48
MSL3-211ENST00000473380 ELP3Q9H9T3 547 aa5.83□□□□□ -1.48
MSL3-211ENST00000473380 STIM2Q9P246 746 aa5.83□□□□□ -1.48
MSL3-211ENST00000473380 SHANK2Q9UPX8 1470 aa5.83□□□□□ -1.48
MSL3-211ENST00000473380 SYNMO15061 1565 aa5.82□□□□□ -1.48
MSL3-211ENST00000473380 BICDL2A1A5D9 508 aa5.82□□□□□ -1.48
MSL3-211ENST00000473380 WDR64B1ANS9 1081 aa5.82□□□□□ -1.48
MSL3-211ENST00000473380 TCERG1O14776 1098 aaKnown RBP5.82□□□□□ -1.48
MSL3-211ENST00000473380 NPHP1O15259 732 aa5.82□□□□□ -1.48
MSL3-211ENST00000473380 SART1O43290 800 aaKnown RBP5.82□□□□□ -1.48
MSL3-211ENST00000473380 DHX16O60231 1041 aaKnown RBP5.82□□□□□ -1.48
MSL3-211ENST00000473380 FGRP09769 529 aa5.82□□□□□ -1.48
MSL3-211ENST00000473380 POLD1P28340 1107 aa5.82□□□□□ -1.48
MSL3-211ENST00000473380 GRIK1P39086 918 aa5.82□□□□□ -1.48
MSL3-211ENST00000473380 HLTFQ14527 1009 aaKnown RBP eCLIP5.82□□□□□ -1.48
MSL3-211ENST00000473380 PPP2R5AQ15172 486 aa5.82□□□□□ -1.48
MSL3-211ENST00000473380 ARSHQ5FYA8 562 aa5.82□□□□□ -1.48
MSL3-211ENST00000473380 INTS5Q6P9B9 1019 aaKnown RBP5.82□□□□□ -1.48
MSL3-211ENST00000473380 DTX1Q86Y01 620 aa5.82□□□□□ -1.48
MSL3-211ENST00000473380 CLEC10AQ8IUN9 316 aa5.82□□□□□ -1.48
MSL3-211ENST00000473380 CREBRFQ8IUR6 639 aa5.82□□□□□ -1.48
MSL3-211ENST00000473380 WDR75Q8IWA0 830 aaKnown RBP5.82□□□□□ -1.48
MSL3-211ENST00000473380 ZNF654Q8IZM8 581 aa5.82□□□□□ -1.48
MSL3-211ENST00000473380 SNRNP27Q8WVK2 155 aaKnown RBP5.82□□□□□ -1.48
MSL3-211ENST00000473380 SLC7A3Q8WY07 619 aa5.82□□□□□ -1.48
MSL3-211ENST00000473380 NUDT16Q96DE0 195 aaKnown RBP5.82□□□□□ -1.48
MSL3-211ENST00000473380 YTHDC1Q96MU7 727 aaKnown RBP5.82□□□□□ -1.48
MSL3-211ENST00000473380 HHIPQ96QV1 700 aa5.82□□□□□ -1.48
MSL3-211ENST00000473380 CDC5LQ99459 802 aaKnown RBP5.82□□□□□ -1.48
MSL3-211ENST00000473380 ADAM19Q9H013 955 aa5.82□□□□□ -1.48
MSL3-211ENST00000473380 HOMER2Q9NSB8 354 aa5.82□□□□□ -1.48
MSL3-211ENST00000473380 VTI1BQ9UEU0 232 aa5.82□□□□□ -1.48
MSL3-211ENST00000473380 PARP2Q9UGN5 583 aa5.82□□□□□ -1.48
MSL3-211ENST00000473380 THRAP3Q9Y2W1 955 aaKnown RBP5.82□□□□□ -1.48
MSL3-211ENST00000473380 TCOF1Q13428 1488 aaKnown RBP5.82□□□□□ -1.48
MSL3-211ENST00000473380 TRAPPC8Q9Y2L5 1435 aa5.82□□□□□ -1.48
MSL3-211ENST00000473380 KDM5CP41229 1560 aa5.81□□□□□ -1.48
MSL3-211ENST00000473380 ZMYM4Q5VZL5 1548 aa5.81□□□□□ -1.48
MSL3-211ENST00000473380 H3BRJ5 948 aa5.81□□□□□ -1.48
MSL3-211ENST00000473380 PRPF40AO75400 957 aaKnown RBP5.81□□□□□ -1.48
MSL3-211ENST00000473380 WNT11O96014 354 aa5.81□□□□□ -1.48
MSL3-211ENST00000473380 MYL1P05976 194 aa5.81□□□□□ -1.48
MSL3-211ENST00000473380 LDHCP07864 332 aa5.81□□□□□ -1.48
MSL3-211ENST00000473380 SERINC3Q13530 473 aa5.81□□□□□ -1.48
MSL3-211ENST00000473380 KCTD2Q14681 263 aa5.81□□□□□ -1.48
MSL3-211ENST00000473380 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.81□□□□□ -1.48
MSL3-211ENST00000473380 MFSD14AQ96MC6 490 aa5.81□□□□□ -1.48
MSL3-211ENST00000473380 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.81□□□□□ -1.48
MSL3-211ENST00000473380 ZNF700Q9H0M5 742 aa5.81□□□□□ -1.48
MSL3-211ENST00000473380 ANO2Q9NQ90 1003 aa5.81□□□□□ -1.48
MSL3-211ENST00000473380 SEPT3Q9UH03 358 aa5.81□□□□□ -1.48
MSL3-211ENST00000473380 FEZ2Q9UHY8 353 aaPredicted RBP5.81□□□□□ -1.48
MSL3-211ENST00000473380 POLR1AO95602 1720 aaPredicted RBP5.81□□□□□ -1.48
MSL3-211ENST00000473380 ARID1BQ8NFD5 2236 aaPredicted RBP5.8□□□□□ -1.48
MSL3-211ENST00000473380 A6NHS1 94 aa5.8□□□□□ -1.48
MSL3-211ENST00000473380 FAM177BA6PVY3 158 aa5.8□□□□□ -1.48
MSL3-211ENST00000473380 NFKBIEO00221 500 aa5.8□□□□□ -1.48
MSL3-211ENST00000473380 CDC45O75419 566 aa5.8□□□□□ -1.48
MSL3-211ENST00000473380 DAB2P98082 770 aa5.8□□□□□ -1.48
MSL3-211ENST00000473380 ARHGAP4P98171 946 aa5.8□□□□□ -1.48
MSL3-211ENST00000473380 EXOSC10Q01780 885 aaKnown RBP5.8□□□□□ -1.48
MSL3-211ENST00000473380 SF3B2Q13435 895 aaKnown RBP5.8□□□□□ -1.48
MSL3-211ENST00000473380 ECM1Q16610 540 aa5.8□□□□□ -1.48
MSL3-211ENST00000473380 SYCP2LQ5T4T6 812 aa5.8□□□□□ -1.48
MSL3-211ENST00000473380 MEX3CQ5U5Q3 659 aaKnown RBP5.8□□□□□ -1.48
MSL3-211ENST00000473380 PPP4R4Q6NUP7 873 aa5.8□□□□□ -1.48
MSL3-211ENST00000473380 ARMCX6Q7L4S7 300 aa5.8□□□□□ -1.48
MSL3-211ENST00000473380 ZNF438Q7Z4V0 828 aa5.8□□□□□ -1.48
MSL3-211ENST00000473380 SHISA5Q8N114 240 aa5.8□□□□□ -1.48
MSL3-211ENST00000473380 C1orf127Q8N9H9 656 aa5.8□□□□□ -1.48
MSL3-211ENST00000473380 ENOX1Q8TC92 643 aaKnown RBP5.8□□□□□ -1.48
MSL3-211ENST00000473380 FAM161BQ96MY7 647 aa5.8□□□□□ -1.48
MSL3-211ENST00000473380 ARPC5LQ9BPX5 153 aa5.8□□□□□ -1.48
MSL3-211ENST00000473380 RUSC1Q9BVN2 902 aa5.8□□□□□ -1.48
MSL3-211ENST00000473380 IFT122Q9HBG6 1241 aa5.8□□□□□ -1.48
MSL3-211ENST00000473380 ARNT2Q9HBZ2 717 aa5.8□□□□□ -1.48
MSL3-211ENST00000473380 SALL4Q9UJQ4 1053 aa5.8□□□□□ -1.48
MSL3-211ENST00000473380 LZTS1Q9Y250 596 aa5.8□□□□□ -1.48
MSL3-211ENST00000473380 RGS12O14924 1447 aa5.8□□□□□ -1.48
MSL3-211ENST00000473380 CDK13Q14004 1512 aaKnown RBP5.79□□□□□ -1.48
MSL3-211ENST00000473380 DENND4BO75064 1496 aaPredicted RBP5.79□□□□□ -1.48
MSL3-211ENST00000473380 ABCA9Q8IUA7 1624 aa5.79□□□□□ -1.48
MSL3-211ENST00000473380 CCDC163A0A0D9SF12 145 aa5.79□□□□□ -1.48
MSL3-211ENST00000473380 GOLGA6CA6NDK9 693 aa5.79□□□□□ -1.48
MSL3-211ENST00000473380 GOLGA6BA6NDN3 693 aa5.79□□□□□ -1.48
MSL3-211ENST00000473380 GOLGA6DP0CG33 693 aa5.79□□□□□ -1.48
MSL3-211ENST00000473380 YBX3P16989 372 aaKnown RBP eCLIP5.79□□□□□ -1.48
MSL3-211ENST00000473380 FKBP4Q02790 459 aaKnown RBP eCLIP5.79□□□□□ -1.48
MSL3-211ENST00000473380 FMR1Q06787 632 aaKnown RBP eCLIP5.79□□□□□ -1.48
MSL3-211ENST00000473380 PSMD2Q13200 908 aa5.79□□□□□ -1.48
MSL3-211ENST00000473380 TBC1D10BQ4KMP7 808 aaPredicted RBP5.79□□□□□ -1.48
MSL3-211ENST00000473380 SGO2Q562F6 1265 aa5.79□□□□□ -1.48
MSL3-211ENST00000473380 ANKRD34AQ69YU3 496 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms