RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 FOXO4P98177 505 aa7.79□□□□□ -1.16
HDAC1-205ENST00000472928 PPATQ06203 517 aa7.79□□□□□ -1.16
HDAC1-205ENST00000472928 LRIT3Q3SXY7 679 aa7.79□□□□□ -1.16
HDAC1-205ENST00000472928 EPHA10Q5JZY3 1008 aa7.79□□□□□ -1.16
HDAC1-205ENST00000472928 ANKRD45Q5TZF3 282 aa7.79□□□□□ -1.16
HDAC1-205ENST00000472928 GPAT2Q6NUI2 795 aa7.79□□□□□ -1.16
HDAC1-205ENST00000472928 CHD1LQ86WJ1 897 aa7.79□□□□□ -1.16
HDAC1-205ENST00000472928 DIS3LQ8TF46 1054 aaKnown RBP7.79□□□□□ -1.16
HDAC1-205ENST00000472928 DCTPP1Q9H773 170 aa7.79□□□□□ -1.16
HDAC1-205ENST00000472928 PAK6Q9NQU5 681 aaPredicted RBP7.79□□□□□ -1.16
HDAC1-205ENST00000472928 CHMP3Q9Y3E7 222 aa7.79□□□□□ -1.16
HDAC1-205ENST00000472928 RPAP1Q9BWH6 1393 aaPredicted RBP7.79□□□□□ -1.16
HDAC1-205ENST00000472928 SMARCA5O60264 1052 aaPredicted RBP7.78□□□□□ -1.16
HDAC1-205ENST00000472928 FDX1P10109 184 aa7.78□□□□□ -1.16
HDAC1-205ENST00000472928 CYP2C8P10632 490 aa7.78□□□□□ -1.16
HDAC1-205ENST00000472928 ELNP15502 786 aa7.78□□□□□ -1.16
HDAC1-205ENST00000472928 FCGRTP55899 365 aa7.78□□□□□ -1.16
HDAC1-205ENST00000472928 IFIT5Q13325 482 aaKnown RBP7.78□□□□□ -1.16
HDAC1-205ENST00000472928 OS9Q13438 667 aaPredicted RBP7.78□□□□□ -1.16
HDAC1-205ENST00000472928 FKBP1CQ5VVH2 108 aa7.78□□□□□ -1.16
HDAC1-205ENST00000472928 APOBEC3HQ6NTF7 200 aaKnown RBP7.78□□□□□ -1.16
HDAC1-205ENST00000472928 FAM83AQ86UY5 434 aa7.78□□□□□ -1.16
HDAC1-205ENST00000472928 LAPTM4BQ86VI4 370 aa7.78□□□□□ -1.16
HDAC1-205ENST00000472928 ZNF687Q8N1G0 1237 aa7.78□□□□□ -1.16
HDAC1-205ENST00000472928 MARVELD3Q96A59 401 aa7.78□□□□□ -1.16
HDAC1-205ENST00000472928 PAWRQ96IZ0 340 aaKnown RBP7.78□□□□□ -1.16
HDAC1-205ENST00000472928 ZNF594Q96JF6 807 aaPredicted RBP7.78□□□□□ -1.16
HDAC1-205ENST00000472928 FAM84BQ96KN1 310 aaPredicted RBP7.78□□□□□ -1.16
HDAC1-205ENST00000472928 DEFB118Q96PH6 123 aa7.78□□□□□ -1.16
HDAC1-205ENST00000472928 PARK7Q99497 189 aaKnown RBP7.78□□□□□ -1.16
HDAC1-205ENST00000472928 ZMYND8Q9ULU4 1186 aaPredicted RBP7.78□□□□□ -1.16
HDAC1-205ENST00000472928 PCDHGC3Q9UN70 934 aa7.78□□□□□ -1.16
HDAC1-205ENST00000472928 MUC3AQ02505 3323 aa7.78□□□□□ -1.16
HDAC1-205ENST00000472928 MGAMO43451 1857 aa7.77□□□□□ -1.17
HDAC1-205ENST00000472928 ADCY3O60266 1144 aa7.77□□□□□ -1.17
HDAC1-205ENST00000472928 SURF6O75683 361 aaKnown RBP7.77□□□□□ -1.17
HDAC1-205ENST00000472928 TFRCP02786 760 aaKnown RBP7.77□□□□□ -1.17
HDAC1-205ENST00000472928 HIBADHP31937 336 aaKnown RBP7.77□□□□□ -1.17
HDAC1-205ENST00000472928 MAGEA10P43363 369 aaPredicted RBP7.77□□□□□ -1.17
HDAC1-205ENST00000472928 FLT3LGP49771 235 aa7.77□□□□□ -1.17
HDAC1-205ENST00000472928 BCAMP50895 628 aa7.77□□□□□ -1.17
HDAC1-205ENST00000472928 HDLBPQ00341 1268 aaKnown RBP7.77□□□□□ -1.17
HDAC1-205ENST00000472928 IRF5Q13568 498 aa7.77□□□□□ -1.17
HDAC1-205ENST00000472928 RABL6Q3YEC7 729 aaPredicted RBP7.77□□□□□ -1.17
HDAC1-205ENST00000472928 LMBR1LQ6UX01 489 aa7.77□□□□□ -1.17
HDAC1-205ENST00000472928 MIGA2Q7L4E1 593 aa7.77□□□□□ -1.17
HDAC1-205ENST00000472928 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.77□□□□□ -1.17
HDAC1-205ENST00000472928 C7orf61Q8IZ16 206 aa7.77□□□□□ -1.17
HDAC1-205ENST00000472928 HLA-CQ95604 372 aa7.77□□□□□ -1.17
HDAC1-205ENST00000472928 ZDHHC15Q96MV8 337 aa7.77□□□□□ -1.17
HDAC1-205ENST00000472928 ZNF341Q9BYN7 854 aa7.77□□□□□ -1.17
HDAC1-205ENST00000472928 LRRCC1Q9C099 1032 aa7.77□□□□□ -1.17
HDAC1-205ENST00000472928 ZNF112Q9UJU3 913 aa7.77□□□□□ -1.17
HDAC1-205ENST00000472928 PA2G4Q9UQ80 394 aaKnown RBP7.77□□□□□ -1.17
HDAC1-205ENST00000472928 RAB11FIP3O75154 756 aa7.76□□□□□ -1.17
HDAC1-205ENST00000472928 AP1G2O75843 785 aa7.76□□□□□ -1.17
HDAC1-205ENST00000472928 CAPN2P17655 700 aa7.76□□□□□ -1.17
HDAC1-205ENST00000472928 GUCA2AQ02747 115 aa7.76□□□□□ -1.17
HDAC1-205ENST00000472928 UBE4AQ14139 1066 aa7.76□□□□□ -1.17
HDAC1-205ENST00000472928 HSP90AB4PQ58FF6 505 aa7.76□□□□□ -1.17
HDAC1-205ENST00000472928 NOL9Q5SY16 702 aaKnown RBP7.76□□□□□ -1.17
HDAC1-205ENST00000472928 DCAF15Q66K64 600 aa7.76□□□□□ -1.17
HDAC1-205ENST00000472928 NECAB2Q7Z6G3 386 aa7.76□□□□□ -1.17
HDAC1-205ENST00000472928 FBXO33Q7Z6M2 555 aa7.76□□□□□ -1.17
HDAC1-205ENST00000472928 ERC1Q8IUD2 1116 aa7.76□□□□□ -1.17
HDAC1-205ENST00000472928 SLF2Q8IX21 1173 aa7.76□□□□□ -1.17
HDAC1-205ENST00000472928 TDHQ8IZJ6 230 aa7.76□□□□□ -1.17
HDAC1-205ENST00000472928 CCDC82Q8N4S0 544 aa7.76□□□□□ -1.17
HDAC1-205ENST00000472928 TEKT1Q969V4 418 aa7.76□□□□□ -1.17
HDAC1-205ENST00000472928 NBPF3Q9H094 633 aa7.76□□□□□ -1.17
HDAC1-205ENST00000472928 SIL1Q9H173 461 aa7.76□□□□□ -1.17
HDAC1-205ENST00000472928 BDP1A6H8Y1 2624 aa7.75□□□□□ -1.17
HDAC1-205ENST00000472928 MYO5AQ9Y4I1 1855 aaKnown RBP7.75□□□□□ -1.17
HDAC1-205ENST00000472928 PIEZO1Q92508 2521 aa7.75□□□□□ -1.17
HDAC1-205ENST00000472928 FAM205CA6NFA0 338 aa7.75□□□□□ -1.17
HDAC1-205ENST00000472928 BHMG1C9JSJ3 638 aaPredicted RBP7.75□□□□□ -1.17
HDAC1-205ENST00000472928 CXCL11O14625 94 aa7.75□□□□□ -1.17
HDAC1-205ENST00000472928 SLC4A3P48751 1232 aa7.75□□□□□ -1.17
HDAC1-205ENST00000472928 CHAF1AQ13111 956 aaPredicted RBP7.75□□□□□ -1.17
HDAC1-205ENST00000472928 LDHAL6AQ6ZMR3 332 aa7.75□□□□□ -1.17
HDAC1-205ENST00000472928 KLHDC4Q8TBB5 520 aa7.75□□□□□ -1.17
HDAC1-205ENST00000472928 RHPN1Q8TCX5 695 aa7.75□□□□□ -1.17
HDAC1-205ENST00000472928 OTUD7AQ8TE49 926 aaPredicted RBP7.75□□□□□ -1.17
HDAC1-205ENST00000472928 HOOK2Q96ED9 719 aa7.75□□□□□ -1.17
HDAC1-205ENST00000472928 KIF1BPQ96EK5 621 aa7.75□□□□□ -1.17
HDAC1-205ENST00000472928 GUCD1Q96NT3 240 aa7.75□□□□□ -1.17
HDAC1-205ENST00000472928 MRIQ9BWK5 157 aa7.75□□□□□ -1.17
HDAC1-205ENST00000472928 PUS3Q9BZE2 481 aaKnown RBP7.75□□□□□ -1.17
HDAC1-205ENST00000472928 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.75□□□□□ -1.17
HDAC1-205ENST00000472928 IL1RAPL2Q9NP60 686 aa7.75□□□□□ -1.17
HDAC1-205ENST00000472928 IQSEC3Q9UPP2 1182 aaPredicted RBP7.75□□□□□ -1.17
HDAC1-205ENST00000472928 NOP58Q9Y2X3 529 aaKnown RBP7.75□□□□□ -1.17
HDAC1-205ENST00000472928 CDH23Q9H251 3354 aa7.75□□□□□ -1.17
HDAC1-205ENST00000472928 RPTORQ8N122 1335 aa7.75□□□□□ -1.17
HDAC1-205ENST00000472928 DNAH12Q6ZR08 3092 aa7.75□□□□□ -1.17
HDAC1-205ENST00000472928 ATRNL1Q5VV63 1379 aa7.74□□□□□ -1.17
HDAC1-205ENST00000472928 A0A0G2JLL6 359 aaPredicted RBP7.74□□□□□ -1.17
HDAC1-205ENST00000472928 TK2O00142 265 aa7.74□□□□□ -1.17
HDAC1-205ENST00000472928 CFHP08603 1231 aa7.74□□□□□ -1.17
HDAC1-205ENST00000472928 SYN1P17600 705 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms