RNA–Protein interactions for RNA: ENST00000472756.1

VPS45-206, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 352 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-206ENST00000472756 C3orf58Q8NDZ4 430 aa4.03□□□□□ -1.76
VPS45-206ENST00000472756 EPS8L3Q8TE67 593 aaKnown RBP4.03□□□□□ -1.76
VPS45-206ENST00000472756 SIGLEC10Q96LC7 697 aa4.03□□□□□ -1.76
VPS45-206ENST00000472756 Q96M66 194 aa4.03□□□□□ -1.76
VPS45-206ENST00000472756 NECAB3Q96P71 396 aaPredicted RBP4.03□□□□□ -1.76
VPS45-206ENST00000472756 LUC7LQ9NQ29 371 aaKnown RBP4.03□□□□□ -1.76
VPS45-206ENST00000472756 CNOT11Q9UKZ1 510 aaKnown RBP4.03□□□□□ -1.76
VPS45-206ENST00000472756 TPX2Q9ULW0 747 aaKnown RBP4.03□□□□□ -1.76
VPS45-206ENST00000472756 ZC3H12DA2A288 527 aaKnown RBP4.02□□□□□ -1.77
VPS45-206ENST00000472756 FITM1A5D6W6 292 aa4.02□□□□□ -1.77
VPS45-206ENST00000472756 ENC1O14682 589 aa4.02□□□□□ -1.77
VPS45-206ENST00000472756 EFEMP2O95967 443 aa4.02□□□□□ -1.77
VPS45-206ENST00000472756 INSRRP14616 1297 aa4.02□□□□□ -1.77
VPS45-206ENST00000472756 FCGRTP55899 365 aa4.02□□□□□ -1.77
VPS45-206ENST00000472756 ARHGAP4P98171 946 aa4.02□□□□□ -1.77
VPS45-206ENST00000472756 HHIPL2Q6UWX4 724 aa4.02□□□□□ -1.77
VPS45-206ENST00000472756 FRMD5Q7Z6J6 570 aa4.02□□□□□ -1.77
VPS45-206ENST00000472756 MIPEPQ99797 713 aa4.02□□□□□ -1.77
VPS45-206ENST00000472756 CCDC88BA6NC98 1476 aa4.02□□□□□ -1.77
VPS45-206ENST00000472756 TOP2AP11388 1531 aaKnown RBP4.01□□□□□ -1.77
VPS45-206ENST00000472756 ATAD2BQ9ULI0 1458 aa4.01□□□□□ -1.77
VPS45-206ENST00000472756 GPR182O15218 404 aa4.01□□□□□ -1.77
VPS45-206ENST00000472756 ICMTO60725 284 aa4.01□□□□□ -1.77
VPS45-206ENST00000472756 GADD45BO75293 160 aaPredicted RBP4.01□□□□□ -1.77
VPS45-206ENST00000472756 PAGE1O75459 146 aa4.01□□□□□ -1.77
VPS45-206ENST00000472756 CBX7O95931 251 aa4.01□□□□□ -1.77
VPS45-206ENST00000472756 CST3P01034 146 aaPredicted RBP4.01□□□□□ -1.77
VPS45-206ENST00000472756 TNFRSF1AP19438 455 aa4.01□□□□□ -1.77
VPS45-206ENST00000472756 AFF3P51826 1226 aaKnown RBP4.01□□□□□ -1.77
VPS45-206ENST00000472756 INPP5AQ14642 412 aa4.01□□□□□ -1.77
VPS45-206ENST00000472756 ERICH6BQ5W0A0 696 aa4.01□□□□□ -1.77
VPS45-206ENST00000472756 ZNF746Q6NUN9 644 aaPredicted RBP4.01□□□□□ -1.77
VPS45-206ENST00000472756 TMEFF1Q8IYR6 380 aa4.01□□□□□ -1.77
VPS45-206ENST00000472756 TP53I13Q8NBR0 393 aaPredicted RBP4.01□□□□□ -1.77
VPS45-206ENST00000472756 SYT8Q8NBV8 401 aa4.01□□□□□ -1.77
VPS45-206ENST00000472756 CITED4Q96RK1 184 aa4.01□□□□□ -1.77
VPS45-206ENST00000472756 WNT10AQ9GZT5 417 aa4.01□□□□□ -1.77
VPS45-206ENST00000472756 EGFL7Q9UHF1 273 aa4.01□□□□□ -1.77
VPS45-206ENST00000472756 EIF4G1Q04637 1599 aaKnown RBP4.01□□□□□ -1.77
VPS45-206ENST00000472756 PEG3Q9GZU2 1588 aa4.01□□□□□ -1.77
VPS45-206ENST00000472756 LOC105371045A0A1W2PR82 267 aa4□□□□□ -1.77
VPS45-206ENST00000472756 PDE3BQ13370 1112 aa4□□□□□ -1.77
VPS45-206ENST00000472756 PUM1Q14671 1186 aaKnown RBP eCLIP4□□□□□ -1.77
VPS45-206ENST00000472756 ZFYVE27Q5T4F4 411 aa4□□□□□ -1.77
VPS45-206ENST00000472756 LRFN4Q6PJG9 635 aa4□□□□□ -1.77
VPS45-206ENST00000472756 CREG2Q8IUH2 290 aa4□□□□□ -1.77
VPS45-206ENST00000472756 SP8Q8IXZ3 490 aa4□□□□□ -1.77
VPS45-206ENST00000472756 OXR1Q8N573 874 aa4□□□□□ -1.77
VPS45-206ENST00000472756 ANKRD24Q8TF21 1146 aa4□□□□□ -1.77
VPS45-206ENST00000472756 LINC01599Q8WXQ3 324 aa4□□□□□ -1.77
VPS45-206ENST00000472756 ACSBG1Q96GR2 724 aa4□□□□□ -1.77
VPS45-206ENST00000472756 GPR62Q9BZJ7 368 aa4□□□□□ -1.77
VPS45-206ENST00000472756 ADAM7Q9H2U9 754 aa4□□□□□ -1.77
VPS45-206ENST00000472756 SMARCA2P51531 1590 aa4□□□□□ -1.77
VPS45-206ENST00000472756 OVOL3O00110 214 aa3.99□□□□□ -1.77
VPS45-206ENST00000472756 N4BP3O15049 544 aa3.99□□□□□ -1.77
VPS45-206ENST00000472756 EPHB3P54753 998 aa3.99□□□□□ -1.77
VPS45-206ENST00000472756 YBX1P67809 324 aaKnown RBP3.99□□□□□ -1.77
VPS45-206ENST00000472756 PTPN11Q06124 597 aaPredicted RBP3.99□□□□□ -1.77
VPS45-206ENST00000472756 ZNF211Q13398 564 aaPredicted RBP3.99□□□□□ -1.77
VPS45-206ENST00000472756 TMEM132EQ6IEE7 984 aa3.99□□□□□ -1.77
VPS45-206ENST00000472756 ZDHHC14Q8IZN3 488 aa3.99□□□□□ -1.77
VPS45-206ENST00000472756 ALKBH8Q96BT7 664 aaKnown RBP3.99□□□□□ -1.77
VPS45-206ENST00000472756 BCO2Q9BYV7 579 aa3.99□□□□□ -1.77
VPS45-206ENST00000472756 CNTD2Q9H8S5 307 aa3.99□□□□□ -1.77
VPS45-206ENST00000472756 ANO2Q9NQ90 1003 aa3.99□□□□□ -1.77
VPS45-206ENST00000472756 BRPF3Q9ULD4 1205 aa3.99□□□□□ -1.77
VPS45-206ENST00000472756 IRAK3Q9Y616 596 aa3.99□□□□□ -1.77
VPS45-206ENST00000472756 PRICKLE3O43900 615 aaPredicted RBP3.98□□□□□ -1.77
VPS45-206ENST00000472756 CILPO75339 1184 aa3.98□□□□□ -1.77
VPS45-206ENST00000472756 CYP7A1P22680 504 aa3.98□□□□□ -1.77
VPS45-206ENST00000472756 TPP2P29144 1249 aaPredicted RBP3.98□□□□□ -1.77
VPS45-206ENST00000472756 CAP1Q01518 475 aa3.98□□□□□ -1.77
VPS45-206ENST00000472756 PI16Q6UXB8 463 aa3.98□□□□□ -1.77
VPS45-206ENST00000472756 NLRX1Q86UT6 975 aa3.98□□□□□ -1.77
VPS45-206ENST00000472756 TSPYL5Q86VY4 417 aaPredicted RBP3.98□□□□□ -1.77
VPS45-206ENST00000472756 FAM129CQ86XR2 697 aa3.98□□□□□ -1.77
VPS45-206ENST00000472756 HID1Q8IV36 788 aa3.98□□□□□ -1.77
VPS45-206ENST00000472756 LINC01356Q8N9X3 169 aa3.98□□□□□ -1.77
VPS45-206ENST00000472756 DNAJB8Q8NHS0 232 aa3.98□□□□□ -1.77
VPS45-206ENST00000472756 G6PC3Q9BUM1 346 aa3.98□□□□□ -1.77
VPS45-206ENST00000472756 PCDHA4Q9UN74 947 aa3.98□□□□□ -1.77
VPS45-206ENST00000472756 PLP2Q04941 152 aa3.97□□□□□ -1.77
VPS45-206ENST00000472756 EGR3Q06889 387 aa3.97□□□□□ -1.77
VPS45-206ENST00000472756 RTP5Q14D33 572 aa3.97□□□□□ -1.77
VPS45-206ENST00000472756 PRAMEF13Q5VWM6 474 aa3.97□□□□□ -1.77
VPS45-206ENST00000472756 CDH24Q86UP0 819 aa3.97□□□□□ -1.77
VPS45-206ENST00000472756 CBX8Q9HC52 389 aa3.97□□□□□ -1.77
VPS45-206ENST00000472756 NCAPD3P42695 1498 aa3.97□□□□□ -1.77
VPS45-206ENST00000472756 OR14I1A6ND48 311 aa3.96□□□□□ -1.78
VPS45-206ENST00000472756 MATN3O15232 486 aa3.96□□□□□ -1.78
VPS45-206ENST00000472756 PDE6BP35913 854 aa3.96□□□□□ -1.78
VPS45-206ENST00000472756 SRSF3P84103 164 aaKnown RBP3.96□□□□□ -1.78
VPS45-206ENST00000472756 ZXDAP98168 799 aa3.96□□□□□ -1.78
VPS45-206ENST00000472756 CHRNEQ04844 493 aa3.96□□□□□ -1.78
VPS45-206ENST00000472756 VMACQ2NL98 169 aa3.96□□□□□ -1.78
VPS45-206ENST00000472756 LLGL2Q6P1M3 1020 aa3.96□□□□□ -1.78
VPS45-206ENST00000472756 SPPL2CQ8IUH8 684 aa3.96□□□□□ -1.78
VPS45-206ENST00000472756 MRPL41Q8IXM3 137 aaKnown RBP3.96□□□□□ -1.78
VPS45-206ENST00000472756 DHX38Q92620 1227 aaKnown RBP3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms