RNA–Protein interactions for RNA: ENST00000472608.5

ABCF3-209, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 657 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-209ENST00000472608 OSBPL5Q9H0X9 879 aaPredicted RBP17.25■□□□□ 0.35
ABCF3-209ENST00000472608 ASCC2Q9H1I8 757 aaPredicted RBP17.25■□□□□ 0.35
ABCF3-209ENST00000472608 NDUFB9Q9Y6M9 179 aa17.25■□□□□ 0.35
ABCF3-209ENST00000472608 LOC285556D6RIA3 1793 aa17.25■□□□□ 0.35
ABCF3-209ENST00000472608 NPM3O75607 178 aaKnown RBP17.24■□□□□ 0.35
ABCF3-209ENST00000472608 BAG3O95817 575 aa17.24■□□□□ 0.35
ABCF3-209ENST00000472608 PLCG2P16885 1265 aa17.24■□□□□ 0.35
ABCF3-209ENST00000472608 BTDP43251 543 aa17.24■□□□□ 0.35
ABCF3-209ENST00000472608 PI4K2BQ8TCG2 481 aa17.24■□□□□ 0.35
ABCF3-209ENST00000472608 USP6NLQ92738 828 aa17.24■□□□□ 0.35
ABCF3-209ENST00000472608 NEFLP07196 543 aa17.23■□□□□ 0.35
ABCF3-209ENST00000472608 CYP2B6P20813 491 aa17.23■□□□□ 0.35
ABCF3-209ENST00000472608 PDE1AP54750 535 aa17.23■□□□□ 0.35
ABCF3-209ENST00000472608 RHBDL3P58872 404 aa17.23■□□□□ 0.35
ABCF3-209ENST00000472608 CACNB2Q08289 660 aaPredicted RBP17.23■□□□□ 0.35
ABCF3-209ENST00000472608 B4GALNT3Q6L9W6 998 aa17.23■□□□□ 0.35
ABCF3-209ENST00000472608 OTUD7AQ8TE49 926 aaPredicted RBP17.23■□□□□ 0.35
ABCF3-209ENST00000472608 SOCS4Q8WXH5 440 aa17.23■□□□□ 0.35
ABCF3-209ENST00000472608 FAM161BQ96MY7 647 aa17.23■□□□□ 0.35
ABCF3-209ENST00000472608 CDX2Q99626 313 aaPredicted RBP17.23■□□□□ 0.35
ABCF3-209ENST00000472608 NUDT12Q9BQG2 462 aa17.23■□□□□ 0.35
ABCF3-209ENST00000472608 NOL10Q9BSC4 688 aaKnown RBP17.23■□□□□ 0.35
ABCF3-209ENST00000472608 LNPKQ9C0E8 428 aa17.23■□□□□ 0.35
ABCF3-209ENST00000472608 CYP7A1P22680 504 aa17.22■□□□□ 0.35
ABCF3-209ENST00000472608 HOXA7P31268 230 aaPredicted RBP17.22■□□□□ 0.35
ABCF3-209ENST00000472608 HMGCS2P54868 508 aa17.22■□□□□ 0.35
ABCF3-209ENST00000472608 SLC9C2Q5TAH2 1124 aa17.22■□□□□ 0.35
ABCF3-209ENST00000472608 ZNF697Q5TEC3 545 aa17.22■□□□□ 0.35
ABCF3-209ENST00000472608 ERICH6BQ5W0A0 696 aa17.22■□□□□ 0.35
ABCF3-209ENST00000472608 MAGEB6Q8N7X4 407 aa17.22■□□□□ 0.35
ABCF3-209ENST00000472608 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.22■□□□□ 0.353e-6■■■■■ 34.1
ABCF3-209ENST00000472608 OSBPL3Q9H4L5 887 aa17.22■□□□□ 0.35
ABCF3-209ENST00000472608 MAST2Q6P0Q8 1798 aa17.22■□□□□ 0.35
ABCF3-209ENST00000472608 MYO5AQ9Y4I1 1855 aaKnown RBP17.22■□□□□ 0.35
ABCF3-209ENST00000472608 ZSCAN25Q6NSZ9 544 aa17.21■□□□□ 0.35
ABCF3-209ENST00000472608 TICAM2Q86XR7 235 aa17.21■□□□□ 0.35
ABCF3-209ENST00000472608 KBTBD3Q8NAB2 608 aa17.21■□□□□ 0.35
ABCF3-209ENST00000472608 EDC3Q96F86 508 aaKnown RBP17.21■□□□□ 0.35
ABCF3-209ENST00000472608 SEMA6BQ9H3T3 888 aa17.21■□□□□ 0.35
ABCF3-209ENST00000472608 PDE6AP16499 860 aa17.2■□□□□ 0.34
ABCF3-209ENST00000472608 CCND3P30281 292 aaPredicted RBP17.2■□□□□ 0.34
ABCF3-209ENST00000472608 CAP2P40123 477 aa17.2■□□□□ 0.34
ABCF3-209ENST00000472608 UBE3CQ15386 1083 aa17.2■□□□□ 0.34
ABCF3-209ENST00000472608 ADGRA1Q86SQ6 560 aa17.2■□□□□ 0.34
ABCF3-209ENST00000472608 MAFAQ8NHW3 353 aaPredicted RBP17.2■□□□□ 0.34
ABCF3-209ENST00000472608 LBHD1Q9BQE6 289 aaPredicted RBP17.2■□□□□ 0.34
ABCF3-209ENST00000472608 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.2■□□□□ 0.34
ABCF3-209ENST00000472608 TCRBV5S4A2TA0A5A2 114 aa17.19■□□□□ 0.34
ABCF3-209ENST00000472608 USP17L5A8MUK1 530 aa17.19■□□□□ 0.34
ABCF3-209ENST00000472608 ZKSCAN1P17029 563 aaPredicted RBP17.19■□□□□ 0.34
ABCF3-209ENST00000472608 ADD2P35612 726 aa17.19■□□□□ 0.34
ABCF3-209ENST00000472608 PICALMQ13492 652 aa17.19■□□□□ 0.34
ABCF3-209ENST00000472608 RRP1BQ14684 758 aaKnown RBP17.19■□□□□ 0.34
ABCF3-209ENST00000472608 LRRFIP1Q32MZ4 808 aaKnown RBP17.19■□□□□ 0.34
ABCF3-209ENST00000472608 MORN1Q5T089 497 aa17.19■□□□□ 0.34
ABCF3-209ENST00000472608 TSHZ3Q63HK5 1081 aa17.19■□□□□ 0.34
ABCF3-209ENST00000472608 GPRC5AQ8NFJ5 357 aa17.19■□□□□ 0.34
ABCF3-209ENST00000472608 P2RX7Q99572 595 aaKnown RBP17.19■□□□□ 0.34
ABCF3-209ENST00000472608 WDR18Q9BV38 432 aa17.19■□□□□ 0.34
ABCF3-209ENST00000472608 TXNRD2Q9NNW7 524 aa17.19■□□□□ 0.34
ABCF3-209ENST00000472608 AATFQ9NY61 560 aaKnown RBP eCLIP17.19■□□□□ 0.34
ABCF3-209ENST00000472608 ZFYP08048 801 aaPredicted RBP17.18■□□□□ 0.34
ABCF3-209ENST00000472608 MAPK4P31152 587 aa17.18■□□□□ 0.34
ABCF3-209ENST00000472608 PLEKHM2Q8IWE5 1019 aa17.18■□□□□ 0.34
ABCF3-209ENST00000472608 TEX11Q8IYF3 940 aa17.18■□□□□ 0.34
ABCF3-209ENST00000472608 SYMPKQ92797 1274 aaKnown RBP17.18■□□□□ 0.34
ABCF3-209ENST00000472608 RBPJLQ9UBG7 517 aa17.18■□□□□ 0.34
ABCF3-209ENST00000472608 ZNF532Q9HCE3 1301 aa17.18■□□□□ 0.34
ABCF3-209ENST00000472608 FAM196BA6NMK8 535 aa17.17■□□□□ 0.34
ABCF3-209ENST00000472608 RGS2P41220 211 aa17.17■□□□□ 0.34
ABCF3-209ENST00000472608 BACE1P56817 501 aa17.17■□□□□ 0.34
ABCF3-209ENST00000472608 HERVK_113P62684 666 aa17.17■□□□□ 0.34
ABCF3-209ENST00000472608 CCL14Q16627 93 aa17.17■□□□□ 0.34
ABCF3-209ENST00000472608 CENPQQ7L2Z9 268 aaPredicted RBP17.17■□□□□ 0.34
ABCF3-209ENST00000472608 SH3RF3Q8TEJ3 882 aaPredicted RBP17.17■□□□□ 0.34
ABCF3-209ENST00000472608 RIOK1Q9BRS2 568 aaKnown RBP17.17■□□□□ 0.34
ABCF3-209ENST00000472608 AS3MTQ9HBK9 375 aa17.17■□□□□ 0.34
ABCF3-209ENST00000472608 IRX3P78415 501 aaPredicted RBP17.16■□□□□ 0.34
ABCF3-209ENST00000472608 SMAD3P84022 425 aaKnown RBP17.16■□□□□ 0.34
ABCF3-209ENST00000472608 Q3C1V9 767 aa17.16■□□□□ 0.34
ABCF3-209ENST00000472608 GPR142Q7Z601 462 aa17.16■□□□□ 0.34
ABCF3-209ENST00000472608 EVI5LQ96CN4 794 aa17.16■□□□□ 0.34
ABCF3-209ENST00000472608 SENP6Q9GZR1 1112 aaPredicted RBP17.16■□□□□ 0.34
ABCF3-209ENST00000472608 MAGEB6P1A0A0J9YX57 407 aa17.15■□□□□ 0.34
ABCF3-209ENST00000472608 PEX10O60683 326 aa17.15■□□□□ 0.34
ABCF3-209ENST00000472608 ERVK-9P63128 1117 aa17.15■□□□□ 0.34
ABCF3-209ENST00000472608 ERVK-24P63145 666 aa17.15■□□□□ 0.34
ABCF3-209ENST00000472608 DYNLL1P63167 89 aaKnown RBP17.15■□□□□ 0.34
ABCF3-209ENST00000472608 SHHQ15465 462 aa17.15■□□□□ 0.34
ABCF3-209ENST00000472608 POTEEQ6S8J3 1075 aa17.15■□□□□ 0.34
ABCF3-209ENST00000472608 APBA2Q99767 749 aa17.15■□□□□ 0.34
ABCF3-209ENST00000472608 PORCNQ9H237 461 aa17.15■□□□□ 0.34
ABCF3-209ENST00000472608 DHX36Q9H2U1 1008 aaKnown RBP17.15■□□□□ 0.34
ABCF3-209ENST00000472608 TTYH1Q9H313 450 aaPredicted RBP17.15■□□□□ 0.34
ABCF3-209ENST00000472608 HERC5Q9UII4 1024 aaKnown RBP17.15■□□□□ 0.34
ABCF3-209ENST00000472608 C19orf81C9J6K1 198 aa17.14■□□□□ 0.33
ABCF3-209ENST00000472608 RNF113AO15541 343 aaKnown RBP17.14■□□□□ 0.33
ABCF3-209ENST00000472608 PLEKHH3Q7Z736 793 aa17.14■□□□□ 0.33
ABCF3-209ENST00000472608 MIGA1Q8NAN2 632 aa17.14■□□□□ 0.33
ABCF3-209ENST00000472608 GTF3C2Q8WUA4 911 aaPredicted RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms